prot_Ecto-sp8_S_contig103839.626.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103839.626.1
Unique Nameprot_Ecto-sp8_S_contig103839.626.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp8_S_contig103839.626.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.340e-24
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0 
Query:    1 MAVVPSPRLSTRRHDQGVFMYWIPSSVFQMGQTYTMKNNKVRELLGLKPL 50
            +AV PSPRL TRRHDQGVFMYWIPSS+FQMGQTYTMKNNKVRELLGLKPL
Sbjct:  229 LAVTPSPRLFTRRHDQGVFMYWIPSSLFQMGQTYTMKNNKVRELLGLKPL 278
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BLAST of mRNA_Ecto-sp8_S_contig103839.626.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 5.000e-15
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:   16 QGVFMYWIPSSVFQMGQTYTMKNNKVRELLGLKPL 50
            QGVFMYWIPS+VFQMGQTYTMKNNKVRELLGLKPL
Sbjct:  195 QGVFMYWIPSAVFQMGQTYTMKNNKVRELLGLKPL 229
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103839.626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKU0_9PHAE3.340e-2492.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMT8_ECTSI5.000e-1597.14Oxa1-like homolog, mitochondrial inner membrane in... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103839contigEcto-sp8_S_contig103839:20..169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103839.626.1mRNA_Ecto-sp8_S_contig103839.626.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103839 20..169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103839.626.1 ID=prot_Ecto-sp8_S_contig103839.626.1|Name=mRNA_Ecto-sp8_S_contig103839.626.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp
MAVVPSPRLSTRRHDQGVFMYWIPSSVFQMGQTYTMKNNKVRELLGLKPL
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