prot_Ecto-sp8_S_contig10356.582.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10356.582.1
Unique Nameprot_Ecto-sp8_S_contig10356.582.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length40
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10356.582.1 vs. uniprot
Match: A0A6H5L8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.590e-17
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 
Query:    1 QSSTIFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV 40
            QSSTIFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV
Sbjct:  900 QSSTIFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV 939
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BLAST of mRNA_Ecto-sp8_S_contig10356.582.1 vs. uniprot
Match: D7G8I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I0_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.580e-17
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0 
Query:    1 QSSTIFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV 40
            QSST+FGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV
Sbjct: 1613 QSSTMFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV 1652
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10356.582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8H6_9PHAE2.590e-17100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8I0_ECTSI6.580e-1797.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..40
e-value: 8.6E-8
score: 34.2
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10356contigEcto-sp8_S_contig10356:4203..4322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10356.582.1mRNA_Ecto-sp8_S_contig10356.582.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10356 4203..4322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10356.582.1 ID=prot_Ecto-sp8_S_contig10356.582.1|Name=mRNA_Ecto-sp8_S_contig10356.582.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=40bp
QSSTIFGGVSGAAVDGQLSRFFSDGSTTMTSLETQPWWQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf