prot_Ecto-sp8_S_contig10350.569.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10350.569.1
Unique Nameprot_Ecto-sp8_S_contig10350.569.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length724
Homology
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 756 bits (1951), Expect = 6.700e-266
Identity = 489/543 (90.06%), Postives = 490/543 (90.24%), Query Frame = 0
Query:  186 MVRDDGFAAAXXXXXXXXXXXXXXXXXXXXXPLGSSSAGREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXX---YFPDGAMSSSXXXXXXXDMRSPLVTGAVAGAAAGMHHLMLPSTAGGAGGSSHADPDFHHLAGPDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGAXXXXXXXXXXXGDLAVLKGSGLLSPASAADGNSXXXXXXXXXXXXXXXXXXXXX-PASTAGGEASRRMAGLPVPEAQVLSALEGQGSDGEE 719
            MVRDDGFAAA                     PLGSSSAGREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXX   YFPDGAMS  XXXXXXX MRSPLV+GAVA    GMHHLMLPSTAGGAGGSSHADPD HHLA PDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGA           GDLAVLKGSGLLSPASAADGNS XXXXXXXXXXXXXXXXXXXX PA TAGGEASRRMAGLPVPEAQVLSALEGQ SDGEE
Sbjct:    1 MVRDDGFAAAPQMQQHHGSMSASRHHQPQQQPLGSSSAGREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMRSPLVSGAVAXXXXGMHHLMLPSTAGGAGGSSHADPDLHHLAAPDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGAGRASAASA---GDLAVLKGSGLLSPASAADGNSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEE 540          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.980e-70
Identity = 119/151 (78.81%), Postives = 135/151 (89.40%), Query Frame = 0
Query:  238 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAV 388
            YSIKRCQGFVRCDMDIDAEVVGWVIGK+GSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSV+AYVAAAPIKAGAVEAAVT++++CPP LLD LGDR TIARIVKET AQVVVNKK+ R+IVRG   +V +A   V+A+I  A 
Sbjct:   42 YSIKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAAA 192          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 235 bits (600), Expect = 3.260e-66
Identity = 115/151 (76.16%), Postives = 134/151 (88.74%), Query Frame = 0
Query:  238 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAV 388
            YSIKRCQGF+RCDMDIDAEVVGWVIG+NGSTIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK V+AYVAAAPIKAGAVEAAVT+++ECPP LLD LGDR TIARIVKET AQVVVNKK+ R+I+RG+  +V +A   ++ +I  A 
Sbjct:   57 YSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAAA 207          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 7.570e-29
Identity = 76/176 (43.18%), Postives = 107/176 (60.80%), Query Frame = 0
Query:  240 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVG 410
            ++R  GFVRC MDI  EVVGWVIG++G+ IK+MKH++GC MWVDQ+ LKL ITG D+P +  AA  V   ++ AP+    AG  +   +  IECPP L+  L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L    +  +I       +G GL  + P +   F  G
Sbjct:   25 LERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAGLGGAVPPNFLDFPAG 200          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.330e-23
Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 0
Query:  240 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKI 361
            +++  GFVRC +DI  EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+P +  AA  V   ++ AP+    AG  +  V++ I+CPP L+  L  R  +TI RI +E+ A VV+N+K+
Sbjct:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.230e-17
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 0
Query:  256 EVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPI---------------------------------KAGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLA 376
            EVVGWVIG++GS IK+MKH++GC MWVDQ+ LKL ITG D+P +  AA  V   ++  P                                   AG  +  V++ ++CPP L+  L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV LA
Sbjct:  318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLA 473          
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.010e-14
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  272 MKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTIECPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVG 410
            ++H++GC MWVDQ+ LKL ITG D+P +  AA  V   ++ AP+    AG  +   +  IECPP L+  L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L    +  +I       +G G   + P +   F  G
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAGPGGAVPPNFLDFPAG 202          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10350.569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FQB1_ECTSI6.700e-26690.06SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA3.980e-7078.81Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA3.260e-6676.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI7.570e-2943.18SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA2.330e-2348.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA5.230e-1738.46SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JET1_9PHAE5.010e-1436.81SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..123
NoneNo IPR availablePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 90..687
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 246..306
score: 12.496
IPR004087K Homology domainSMARTSM00322kh_6coord: 322..385
e-value: 18.0
score: 4.8
coord: 245..311
e-value: 5.5E-6
score: 35.9
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 247..311
e-value: 8.1E-11
score: 43.7
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 246..313
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 250..306
e-value: 3.3E-9
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10350contigEcto-sp8_S_contig10350:532..4641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10350.569.1mRNA_Ecto-sp8_S_contig10350.569.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10350 531..4641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10350.569.1 ID=prot_Ecto-sp8_S_contig10350.569.1|Name=mRNA_Ecto-sp8_S_contig10350.569.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=724bp
TRQGITRPSPCDAKATSSGGSNTRGEHTSTQVLSLFALWVLPHFSDFGRT
REFAFQSWGGAPDKPQERAFVGSATLGDTLADFWALDVHQQAQPQPQQQE
RQLQQQQQQRQRQRQRQRQQTESIGERMAPIFHQQQMDHHAHHPAWEDGR
QARPGTHYPLQQHQHQHPHQHQQWPAQGRLHINPAMVRDDGFAAAPPMQQ
HHGSMSASRHHQPQQQPLGSSSAGREVLGEGSFMGRGYSIKRCQGFVRCD
MDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVE
HAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKE
THAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVST
PDSHGSFGVGGGGGGAGAGYFPDGAMSSSGRGGGGGDMRSPLVTGAVAGA
AAGMHHLMLPSTAGGAGGSSHADPDFHHLAGPDYRHARDTAEFHHLATWQ
QEQQQLELKSEHSHQPLQRHHHHGRGVGSDTDDSEIETVSLGSIGARTPV
SSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESS
TSRSSTPTTARTTPRVHFPEGLRALVGGAGGASAASAASAGDLAVLKGSG
LLSPASAADGNSGGGGSNGGGGKPAGSLAPPPSPASTAGGEASRRMAGLP
VPEAQVLSALEGQGSDGEEEEQEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1