prot_Ecto-sp8_S_contig103498.566.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig103498.566.1
Unique Name	prot_Ecto-sp8_S_contig103498.566.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	86

Homology

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: UPI000C7812CB (small ubiquitin-related modifier-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7812CB)

HSP 1 Score: 162 bits (411), Expect = 1.480e-50
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0

Query:    1 MGDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            MGDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG
Sbjct:    1 MGDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPVSSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: A0A0U2T6T1_9MAXI (Small ubiquitin-related modifier n=1 Tax=Paracalanus parvus TaxID=187406 RepID=A0A0U2T6T1_9MAXI)

HSP 1 Score: 158 bits (399), Expect = 1.130e-48
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0

Query:    1 MGDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGGA 84
            MGD TEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVP+TSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG+
Sbjct:    1 MGD-TEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPVTSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGGS 83

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: C1BRP8_CALRO (Small ubiquitin-related modifier n=4 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BRP8_CALRO)

HSP 1 Score: 155 bits (393), Expect = 1.080e-47
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 0

Query:    3 DETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGGAED 86
            DETEYIKLKVVGQDSNEIHFRVK +TQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQ+GG ED
Sbjct:    6 DETEYIKLKVVGQDSNEIHFRVKMSTQMGKLKKSYSERVGVPLSSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQSGGNED 89

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: A0A553PB59_TIGCA (Small ubiquitin-related modifier n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PB59_TIGCA)

HSP 1 Score: 153 bits (386), Expect = 9.910e-47
Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 0

Query:    3 DETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            DE EYIKLKVVGQDSNEIHFRVK +TQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG
Sbjct:    6 DEAEYIKLKVVGQDSNEIHFRVKMSTQMGKLKKSYSERVGVPVSSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 86

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: A0A7R8CNS7_LEPSM (SUMO n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CNS7_LEPSM)

HSP 1 Score: 153 bits (386), Expect = 9.150e-46
Identity = 76/81 (93.83%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    3 DETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            DETEYIKLKVVGQDSNEIHFRVK +TQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQ+GG
Sbjct:   81 DETEYIKLKVVGQDSNEIHFRVKMSTQMGKLKKSYSERVGVPLSSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQSGG 161

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: C1C2M5_CALCM (Small ubiquitin-related modifier n=2 Tax=Caligus clemensi TaxID=344056 RepID=C1C2M5_CALCM)

HSP 1 Score: 150 bits (380), Expect = 1.110e-45
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0

Query:    3 DETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTG 82
            DETEYIKLKVVGQDSNEIHFRVK +TQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQ+G
Sbjct:    7 DETEYIKLKVVGQDSNEIHFRVKMSTQMGKLKKSYSERVGVPLSSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQSG 86

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: A0A1B6LU80_9HEMI (Small ubiquitin-related modifier n=4 Tax=Pancrustacea TaxID=197562 RepID=A0A1B6LU80_9HEMI)

HSP 1 Score: 149 bits (376), Expect = 3.870e-45
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0

Query:    2 GDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            GD  EYIKLKVVG DSNEIHFRVK TTQMGKLKKSYSERVGVP++SLRFLFDGRRINDDETPK LEME DDVIEVYQEQTGG
Sbjct:   11 GDNAEYIKLKVVGNDSNEIHFRVKMTTQMGKLKKSYSERVGVPVSSLRFLFDGRRINDDETPKQLEMENDDVIEVYQEQTGG 92

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: A0A444TGF7_ARMVU (Small ubiquitin-related modifier n=12 Tax=Eumalacostraca TaxID=72041 RepID=A0A444TGF7_ARMVU)

HSP 1 Score: 149 bits (375), Expect = 4.180e-45
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0

Query:    2 GDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            G+  EYIKLKVVGQDSNEIHFRVK TTQMGKLKKSYSERVGVP+ SLRFLFDGRRIND+ETPKALEME DDVIEVYQEQTGG
Sbjct:   11 GEGNEYIKLKVVGQDSNEIHFRVKMTTQMGKLKKSYSERVGVPVASLRFLFDGRRINDEETPKALEMENDDVIEVYQEQTGG 92

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: E9H3D4_DAPPU (Small ubiquitin-related modifier n=3 Tax=Pancrustacea TaxID=197562 RepID=E9H3D4_DAPPU)

HSP 1 Score: 148 bits (374), Expect = 5.940e-45
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0

Query:    5 TEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            +EYIKLKVVGQDSNEIHFRVK TTQMGKLKKSYSERVGVP+TSLRFLFDGRRINDDETPK LEME DDVIEVYQEQTGG
Sbjct:   14 SEYIKLKVVGQDSNEIHFRVKMTTQMGKLKKSYSERVGVPVTSLRFLFDGRRINDDETPKQLEMENDDVIEVYQEQTGG 92

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BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Match: T1J8J4_STRMM (Small ubiquitin-related modifier n=2 Tax=Arthropoda TaxID=6656 RepID=T1J8J4_STRMM)

HSP 1 Score: 148 bits (374), Expect = 6.500e-45
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0

Query:    5 TEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRFLFDGRRINDDETPKALEMEQDDVIEVYQEQTGG 83
            +EYIKLKVVGQDSNEIHFRVK TTQMGKLKKSYSERVGVP+TSLRFLFDGRRINDDETPK LEME DDVIEVYQEQTGG
Sbjct:   17 SEYIKLKVVGQDSNEIHFRVKMTTQMGKLKKSYSERVGVPVTSLRFLFDGRRINDDETPKQLEMENDDVIEVYQEQTGG 95

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig103498.566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI000C7812CB	1.480e-50	97.59	small ubiquitin-related modifier-like n=1 Tax=Eury...	[more]
A0A0U2T6T1_9MAXI	1.130e-48	96.43	Small ubiquitin-related modifier n=1 Tax=Paracalan...	[more]
C1BRP8_CALRO	1.080e-47	92.86	Small ubiquitin-related modifier n=4 Tax=Caligus r...	[more]
A0A553PB59_TIGCA	9.910e-47	93.83	Small ubiquitin-related modifier n=1 Tax=Tigriopus...	[more]
A0A7R8CNS7_LEPSM	9.150e-46	93.83	SUMO n=2 Tax=Lepeophtheirus salmonis TaxID=72036 R...	[more]
C1C2M5_CALCM	1.110e-45	93.75	Small ubiquitin-related modifier n=2 Tax=Caligus c...	[more]
A0A1B6LU80_9HEMI	3.870e-45	90.24	Small ubiquitin-related modifier n=4 Tax=Pancrusta...	[more]
A0A444TGF7_ARMVU	4.180e-45	90.24	Small ubiquitin-related modifier n=12 Tax=Eumalaco...	[more]
E9H3D4_DAPPU	5.940e-45	93.67	Small ubiquitin-related modifier n=3 Tax=Pancrusta...	[more]
T1J8J4_STRMM	6.500e-45	93.67	Small ubiquitin-related modifier n=2 Tax=Arthropod...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	SMART	SM00213	ubq_7	coord: 8..79 e-value: 4.5E-13 score: 59.4
IPR000626	Ubiquitin domain	PROSITE	PS50053	UBIQUITIN_2	coord: 6..83 score: 17.692
None	No IPR available	GENE3D	3.10.20.90		coord: 2..83 e-value: 1.6E-32 score: 114.0
None	No IPR available	PANTHER	PTHR10562:SF14	SMALL UBIQUITIN-RELATED MODIFIER 1	coord: 3..84
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 3..84
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 8..77 e-value: 9.1E-21 score: 73.5
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig103498	contig	Ecto-sp8_S_contig103498:212..469 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig103498.566.1	mRNA_Ecto-sp8_S_contig103498.566.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig103498 212..490 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig103498.566.1 ID=prot_Ecto-sp8_S_contig103498.566.1|Name=mRNA_Ecto-sp8_S_contig103498.566.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=86bp
MGDETEYIKLKVVGQDSNEIHFRVKQTTQMGKLKKSYSERVGVPITSLRF
LFDGRRINDDETPKALEMEQDDVIEVYQEQTGGAED

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom
IPR022617	Rad60/SUMO-like_dom
IPR029071	Ubiquitin-like_domsf