prot_Ecto-sp8_S_contig10348.565.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig10348.565.1
Unique Name	prot_Ecto-sp8_S_contig10348.565.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	392

Homology

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BLAST of mRNA_Ecto-sp8_S_contig10348.565.1 vs. uniprot
Match: A0A6H5KJM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM1_9PHAE)

HSP 1 Score: 519 bits (1336), Expect = 1.390e-180
Identity = 323/337 (95.85%), Postives = 329/337 (97.63%), Query Frame = 0

Query:   56 MDVPSSTTMGEACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXQXRKXXXXXXXXXXXXXXXXXXXXXXXEAARTGKEQESSAAVLQPRTDTVQ 392
            MDVPSSTT+G+ACFSP+TGGDGKRKRNRKAKKFADYVAWEEEATTEREE PT+DGQHHNKRNRKGKSTATQQTP+QSSPFAATPVASPSPSDTAPAT SHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXX X  XXXXXXXXXXXXXXXXXXXXXXX AAR GKEQESSAAVLQPRTD V+
Sbjct:    1 MDVPSSTTVGDACFSPTTGGDGKRKRNRKAKKFADYVAWEEEATTEREE-PTDDGQHHNKRNRKGKSTATQQTPNQSSPFAATPVASPSPSDTAPATDSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHLMKQDKSLEEDPFYSVAYKATCTAATKAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRGKEQESSAAVLQPRTDMVE 336

[Close]

BLAST of mRNA_Ecto-sp8_S_contig10348.565.1 vs. uniprot
Match: D7FN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN54_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 1.890e-146
Identity = 225/233 (96.57%), Postives = 227/233 (97.42%), Query Frame = 0

Query:   56 MDVPSSTTMGEACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADP 288
            MDVPSSTTMG+ACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLK    +  P
Sbjct:    1 MDVPSSTTMGDACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATTEREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAPATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARVEVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGGRPVSLGSISKRIKTSQAELTGLNERINVLKISPVREQP 233

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig10348.565.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig10348.565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KJM1_9PHAE	1.390e-180	95.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FN54_ECTSI	1.890e-146	96.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 262..282

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig10348	contig	Ecto-sp8_S_contig10348:2..5806 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig10348.565.1	mRNA_Ecto-sp8_S_contig10348.565.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig10348 2..5806 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig10348.565.1 ID=prot_Ecto-sp8_S_contig10348.565.1|Name=mRNA_Ecto-sp8_S_contig10348.565.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=392bp
WSVVPSSECRGSDRDRNEGEVKLIFADPLPSLAHPLHHPWTPTQTHTSLL
PRAAIMDVPSSTTMGEACFSPSTGGDGKRKRNRKAKKFADYVAWEEEATT
EREEEPTEDGQHHNKRNRKGKSTATQQTPHQSSPFAATPVASPSPSDTAP
ATGSHDTIVSVKKVAGVQNATRKALEWLQYGDMSLVELGQSLPKLSKARV
EVVMEALRAAGLVTLVRKHAPNAMGEDHVTEVYRFSAGRSPATALEIGGG
RPVSLGSISKRIKTSQAELTGLNERINVLKAEAAKADPEPQQVLEILQHL
MKQDKSLEEDPFYSVAYKATCTAATKAAKAAAAAARATAAAQARKKAAEN
AVAVAASAAAAEATRQAQEAARTGKEQESSAAVLQPRTDTVQ