prot_Ecto-sp8_S_contig10337.550.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10337.550.1
Unique Nameprot_Ecto-sp8_S_contig10337.550.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10337.550.1 vs. uniprot
Match: D8LHH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.720e-52
Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 0 
Query:   31 MAGIGTGTLMGIHKFRVGRWPAPTNSEENTRTWNVKWQWLVPFTRAKHPSYDRVRTRAACSPQHCDSMVTPRASLGPLRLAFF 113
            MAGIGTGTLMGIHKFRVGRWPAPTNSEENT+TWNVKWQWLVPFTRAKHPS DRVRTRAACSPQ+CD+MVTPRASLGP RL  F
Sbjct:    1 MAGIGTGTLMGIHKFRVGRWPAPTNSEENTKTWNVKWQWLVPFTRAKHPSCDRVRTRAACSPQYCDNMVTPRASLGPFRLVCF 83
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BLAST of mRNA_Ecto-sp8_S_contig10337.550.1 vs. uniprot
Match: A0A6H5LAQ6_9PHAE (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAQ6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 5.950e-24
Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 0 
Query:    1 MPSESWPEQLERVKGNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGR 49
            MPSESWPEQLE VK NGASILKKPCVRNALMAGIGTGTLMGIHKFRVG+
Sbjct:    1 MPSESWPEQLEGVKRNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGK 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10337.550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH7_ECTSI2.720e-5291.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAQ6_9PHAE5.950e-2493.88Cytochrome c oxidase assembly protein COX20, mitoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10337contigEcto-sp8_S_contig10337:2499..4318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10337.550.1mRNA_Ecto-sp8_S_contig10337.550.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10337 2462..5140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10337.550.1 ID=prot_Ecto-sp8_S_contig10337.550.1|Name=mRNA_Ecto-sp8_S_contig10337.550.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=133bp
MPSESWPEQLERVKGNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGRW
PAPTNSEENTRTWNVKWQWLVPFTRAKHPSYDRVRTRAACSPQHCDSMVT
PRASLGPLRLAFFLCWREDGNTDRICHPPSVC*
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