prot_Ecto-sp8_S_contig10336.547.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10336.547.1
Unique Nameprot_Ecto-sp8_S_contig10336.547.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10336.547.1 vs. uniprot
Match: D8LB94_ECTSI (Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 4.640e-26
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 0 
Query:    1 MPSVGDVSADVDVKVDNVDAKAPSLETLKPKKGLFGLSFKKLSGKKLKVPDTDVAVPDVSGXXXXXXXXXXXXXXXVDAKL 81
            MPSVGDVSAD+DVK+D+VDAKAPS E LKP+KGLFGLSFKKLSGKKLKVPD DVAVPDVSGXXXXXXXXXXXXXXX+DAKL
Sbjct: 1750 MPSVGDVSADIDVKMDDVDAKAPSSEILKPRKGLFGLSFKKLSGKKLKVPDADVAVPDVSGXXXXXXXXXXXXXXXIDAKL 1830
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BLAST of mRNA_Ecto-sp8_S_contig10336.547.1 vs. uniprot
Match: A0A6H5K9M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.710e-23
Identity = 73/85 (85.88%), Postives = 74/85 (87.06%), Query Frame = 0 
Query:    1 MPSVGDVSADVDVKVDNVDAKAPSLETLKPKKGLFGLSFKKLSGKKLKVPDTDVAVPDVSGXXXXXXXXXXXXXXXVDAKLPEVS 85
            MPSVGDV  DV VK DNVDAK+ SLE  K KKGLFGLSFKKLSGKKLKVPD DVAVPDVS XXXXXXXXXXXXXX VDAKLPEVS
Sbjct: 1374 MPSVGDVLGDVGVKGDNVDAKSSSLEPFKLKKGLFGLSFKKLSGKKLKVPDGDVAVPDVSXXXXXXXXXXXXXXXDVDAKLPEVS 1458
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10336.547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB94_ECTSI4.640e-2690.12Similar to AHNAK nucleoprotein n=1 Tax=Ectocarpus ... [more]
A0A6H5K9M1_9PHAE1.710e-2385.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10336contigEcto-sp8_S_contig10336:5143..5668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10336.547.1mRNA_Ecto-sp8_S_contig10336.547.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10336 5143..5696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10336.547.1 ID=prot_Ecto-sp8_S_contig10336.547.1|Name=mRNA_Ecto-sp8_S_contig10336.547.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=85bp
MPSVGDVSADVDVKVDNVDAKAPSLETLKPKKGLFGLSFKKLSGKKLKVP
DTDVAVPDVSGDVSVPDASVDVSVPDVDAKLPEVS
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