prot_Ecto-sp8_S_contig103304.534.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103304.534.1
Unique Nameprot_Ecto-sp8_S_contig103304.534.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length78
Homology
BLAST of mRNA_Ecto-sp8_S_contig103304.534.1 vs. uniprot
Match: D8LAX4_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX4_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.790e-42
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query:    1 KYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGAST 78
            KYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGAST
Sbjct:  181 KYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAWNVLTAGRVDIQRALATLPGAPAAAGAST 258          
BLAST of mRNA_Ecto-sp8_S_contig103304.534.1 vs. uniprot
Match: A0A7S2EXK5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXK5_TRICV)

HSP 1 Score: 49.7 bits (117), Expect = 4.410e-5
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    1 KYRKIKRANAGFSRKVGAVPGGEACMRALGF-VEH---GDA-QESWLLAPSEAAWNVLTAGRVDIQRALA 65
            KYR++K+ NA F R++G +PGG   M A GF VE    GDA +E + L PS  AW  L A +  +  ALA
Sbjct:  215 KYRRVKKGNAAFQRRLGGLPGGHDAMLAAGFTVEQECSGDACEEIYSLTPSADAWPKLVAAKDAVATALA 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103304.534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAX4_ECTSI2.790e-42100.00Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A7S2EXK5_TRICV4.410e-545.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainPFAMPF09409PUBcoord: 1..52
e-value: 2.9E-10
score: 39.9
NoneNo IPR availableGENE3D1.20.58.2190coord: 1..63
e-value: 1.3E-10
score: 42.8
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 1..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103304contigEcto-sp8_S_contig103304:3..527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103304.534.1mRNA_Ecto-sp8_S_contig103304.534.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103304 3..527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103304.534.1 ID=prot_Ecto-sp8_S_contig103304.534.1|Name=mRNA_Ecto-sp8_S_contig103304.534.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp
KYRKIKRANAGFSRKVGAVPGGEACMRALGFVEHGDAQESWLLAPSEAAW
NVLTAGRVDIQRALATLPGAPAAAGAST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf