prot_Ecto-sp8_S_contig10329.532.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10329.532.1
Unique Nameprot_Ecto-sp8_S_contig10329.532.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length42
Homology
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.610e-11
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
Query:    2 SQELHELSCLVVDELHMIGDGGRGQILELLLAK 34
            + ELHELSCLVVDELHMIGDGGRGQILELLLAK
Sbjct:  204 ADELHELSCLVVDELHMIGDGGRGQILELLLAK 236          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: D2VMZ4_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VMZ4_NAEGR)

HSP 1 Score: 53.9 bits (128), Expect = 3.110e-7
Identity = 22/32 (68.75%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    3 QELHELSCLVVDELHMIGDGGRGQILELLLAK 34
            + +HEL C+VVDELHMIG+GGRGQ+LE L++K
Sbjct:  270 ERIHELGCVVVDELHMIGEGGRGQLLEQLISK 301          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: A0A428XJW7_9ACTN (DEAD/DEAH box helicase n=2 Tax=Actinoplanes sp. ATCC 53533 TaxID=1288362 RepID=A0A428XJW7_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 5.210e-6
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    3 QELHELSCLVVDELHMIGDGGRGQILELLLAKARGE 38
            Q L E+ CLVVDE+H++GD  RG +LE LLA+ RGE
Sbjct:  328 QALAEVGCLVVDEIHLLGDASRGPVLEALLARVRGE 363          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: A0A2P2FEU2_9PSEU (DEAD/DEAH box helicase n=2 Tax=Amycolatopsis lurida TaxID=31959 RepID=A0A2P2FEU2_9PSEU)

HSP 1 Score: 49.7 bits (117), Expect = 9.760e-6
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 LSQELHELSCLVVDELHMIGDGGRGQILELLLAKARGERRAR 42
            L + L E+SCL+VDE+H++GD  RG +LE LLA+ RG  + R
Sbjct:  225 LREALAEVSCLIVDEIHLLGDAERGPVLEALLARMRGNNQVR 266          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: R7TYW9_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TYW9_CAPTE)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    3 QELHELSCLVVDELHMIGDGGRGQILELLLAKAR 36
            +E+ +L CLVVDELHM+GD  RG +LELLL K R
Sbjct:  123 REMAQLGCLVVDELHMVGDAQRGYLLELLLTKVR 156          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: UPI0010547C18 (helicase POLQ-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI0010547C18)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    2 SQELHELSCLVVDELHMIGDGGRGQILELLLAK 34
            +  L+EL  LVVDELHM+GDGGRG +LE++L+K
Sbjct:  342 NNRLNELGLLVVDELHMLGDGGRGAVLEMILSK 374          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: UPI001CFEFAF0 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFEFAF0)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    5 LHELSCLVVDELHMIGDGGRGQILELLLAK 34
            +HEL C+V+DELHM+G+G RGQ+LE LL K
Sbjct:  268 IHELGCVVIDELHMLGEGDRGQLLENLLTK 297          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: UPI001C3220C5 (ATP-dependent RNA helicase DbpA n=2 Tax=Amycolatopsis sp. CA-230715 TaxID=2745196 RepID=UPI001C3220C5)

HSP 1 Score: 48.9 bits (115), Expect = 1.830e-5
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 LSQELHELSCLVVDELHMIGDGGRGQILELLLAKARGE 38
            L + L E+ CL+VDE+H++GD  RG +LE LLA+ RGE
Sbjct:  269 LREALTEVGCLIVDEIHLLGDPARGPVLEALLARMRGE 306          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: A0A151ZAC4_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAC4_9MYCE)

HSP 1 Score: 48.5 bits (114), Expect = 2.500e-5
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    4 ELHELSCLVVDELHMIGDGGRGQILELLLAK 34
            ++HEL C+V+DELHM+GD  RG +LELL++K
Sbjct:  385 KIHELGCVVIDELHMVGDNDRGILLELLISK 415          
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Match: A0A6A5BSQ6_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BSQ6_NAEFO)

HSP 1 Score: 48.5 bits (114), Expect = 2.500e-5
Identity = 19/30 (63.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    5 LHELSCLVVDELHMIGDGGRGQILELLLAK 34
            +HEL C+V+DELHM+G+G RGQ+LE L+ K
Sbjct:  269 IHELGCVVIDELHMLGEGDRGQLLEHLITK 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10329.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM15_ECTSI2.610e-1193.94DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
D2VMZ4_NAEGR3.110e-768.75Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A428XJW7_9ACTN5.210e-661.11DEAD/DEAH box helicase n=2 Tax=Actinoplanes sp. AT... [more]
A0A2P2FEU2_9PSEU9.760e-652.38DEAD/DEAH box helicase n=2 Tax=Amycolatopsis lurid... [more]
R7TYW9_CAPTE1.330e-564.71Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
UPI0010547C181.330e-563.64helicase POLQ-like n=1 Tax=Gouania willdenowi TaxI... [more]
UPI001CFEFAF01.330e-566.67uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
UPI001C3220C51.830e-555.26ATP-dependent RNA helicase DbpA n=2 Tax=Amycolatop... [more]
A0A151ZAC4_9MYCE2.500e-561.29Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A6A5BSQ6_NAEFO2.500e-563.33Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..42
e-value: 1.1E-7
score: 33.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10329contigEcto-sp8_S_contig10329:4..129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10329.532.1mRNA_Ecto-sp8_S_contig10329.532.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10329 4..129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10329.532.1 ID=prot_Ecto-sp8_S_contig10329.532.1|Name=mRNA_Ecto-sp8_S_contig10329.532.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=42bp
LSQELHELSCLVVDELHMIGDGGRGQILELLLAKARGERRAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase