prot_Ecto-sp8_S_contig103190.522.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103190.522.1
Unique Nameprot_Ecto-sp8_S_contig103190.522.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp8_S_contig103190.522.1 vs. uniprot
Match: D7G7G0_ECTSI (Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G0_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.260e-21
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0 
Query:    2 FHKAIAIYNESGRFQQAGKMLQEVGEIYEAEGMTDDAVNSLQQASEYLA 50
            F KAIAIYNESGRFQQAGKMLQEVGEIYEAEGMTDDAVNSLQQASEYLA
Sbjct:  102 FLKAIAIYNESGRFQQAGKMLQEVGEIYEAEGMTDDAVNSLQQASEYLA 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103190.522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7G0_ECTSI1.260e-2197.96Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14938SNAPcoord: 2..49
e-value: 4.9E-11
score: 42.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..50
e-value: 7.6E-10
score: 40.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103190contigEcto-sp8_S_contig103190:320..469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103190.522.1mRNA_Ecto-sp8_S_contig103190.522.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103190 320..469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103190.522.1 ID=prot_Ecto-sp8_S_contig103190.522.1|Name=mRNA_Ecto-sp8_S_contig103190.522.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=50bp
IFHKAIAIYNESGRFQQAGKMLQEVGEIYEAEGMTDDAVNSLQQASEYLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf