prot_Ecto-sp8_S_contig10313.514.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10313.514.1
Unique Nameprot_Ecto-sp8_S_contig10313.514.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length401
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10313.514.1 vs. uniprot
Match: D7G1G8_ECTSI (Kinesin light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G8_ECTSI)

HSP 1 Score: 705 bits (1819), Expect = 1.220e-251
Identity = 362/401 (90.27%), Postives = 367/401 (91.52%), Query Frame = 0 
Query:    1 ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQKPPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGDFLGLLHSFWVAWRAFRVASASIGDIAKRVPTHSVSSGPRFHSSSHTLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAEELNERCLSEATKAFGDVHPVVARVIDQKGSILLAEKDLDGAASWFAEARQIREAFYGKGHALVAPSLQMQAHLEFTAGNKEDASALLKECLTLQEDR 401
            ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQ PPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQG   G L S     RA    +  +G +  +   H  +  P   S   TLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAEELNERCLSEATKAFGDVHPVVARVIDQKG ILLAEKDLDGAASWFAEARQIREAFYGKGHALVAPSLQMQAHLEFTAGNKEDASALLKECLTLQEDR
Sbjct:  212 ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQNPPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGTGSGALESR--IKRALERITGKLGALLLKQGKHRDALHPCAESL--TLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAEELNERCLSEATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARQIREAFYGKGHALVAPSLQMQAHLEFTAGNKEDASALLKECLTLQEDR 608
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BLAST of mRNA_Ecto-sp8_S_contig10313.514.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE)

HSP 1 Score: 650 bits (1676), Expect = 5.700e-221
Identity = 346/448 (77.23%), Postives = 359/448 (80.13%), Query Frame = 0 
Query:    1 ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQKPPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGDFLGLLHSFWVAWRAFRVASASIGDIAKRVPTHSVSSGPRFHSSSHTLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAE-----------------------------------------------ELNERCLSEATKAFGDVHPVVARVIDQKGSILLAEKDLDGAASWFAEARQIREAFYGKGHALVAPSLQMQAHLEFTAGNKEDASALLKECLTLQEDR 401
            ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQK  GFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRH S+TA+VA EATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELV IQG   G L S     RA    +  +G +  +   H  +  P   S   TLIRARQGT+LGPEGSS+LGRSHLPHQDVVDSLCSMAEALM+GNSVDEAE                                                LN+RCLS+ATKAFGDVHPVVARVIDQKG ILLAEKDLDGAASWFAEAR+IREAFYGKGHALVAPSLQMQAHLEFTAG KE ASALLKECL LQEDR
Sbjct:  285 ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQKSAGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHHSTTARVASEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVRIQGAGSGPLESR--IKRALERITGKLGALLLKQGKHMDALNPCAESL--TLIRARQGTNLGPEGSSNLGRSHLPHQDVVDSLCSMAEALMKGNSVDEAEGMYEEAAIILRRLYGDDESLCLETRGIEQLASMMLEAGRADKAGGKSHLNDRCLSKATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARKIREAFYGKGHALVAPSLQMQAHLEFTAGKKEVASALLKECLVLQEDR 728
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10313.514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1G8_ECTSI1.220e-25190.27Kinesin light chain n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KWX2_9PHAE5.700e-22177.23NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13374TPR_10coord: 286..323
e-value: 0.013
score: 15.3
NoneNo IPR availablePFAMPF13424TPR_12coord: 327..399
e-value: 3.8E-9
score: 36.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 271..401
e-value: 4.4E-18
score: 67.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 280..400

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10313contigEcto-sp8_S_contig10313:3..5704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10313.514.1mRNA_Ecto-sp8_S_contig10313.514.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10313 3..5704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10313.514.1 ID=prot_Ecto-sp8_S_contig10313.514.1|Name=mRNA_Ecto-sp8_S_contig10313.514.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=401bp
ILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYE
AARFLQKPPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAK
RDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPAS
RHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQS
LELVSIQGDFLGLLHSFWVAWRAFRVASASIGDIAKRVPTHSVSSGPRFH
SSSHTLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSV
DEAEELNERCLSEATKAFGDVHPVVARVIDQKGSILLAEKDLDGAASWFA
EARQIREAFYGKGHALVAPSLQMQAHLEFTAGNKEDASALLKECLTLQED
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf