prot_Ecto-sp8_S_contig103049.501.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103049.501.1
Unique Nameprot_Ecto-sp8_S_contig103049.501.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length61
Homology
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: D7FXM7_ECTSI (Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM7_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.390e-34
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGE+
Sbjct:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEI 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7S2XUN8_9STRA (Coatomer subunit epsilon n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUN8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.920e-24
Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPDDL+TLRNHFWLG+YQ+AI+EGS LGRL   L +E+DEF+YRSY+ALGQ+ +VL EV
Sbjct:    1 MAEPDDLYTLRNHFWLGNYQMAISEGSSLGRLRSELALEKDEFVYRSYVALGQYQVVLSEV 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: F0YDB8_AURAN (Coatomer subunit epsilon n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDB8_AURAN)

HSP 1 Score: 92.8 bits (229), Expect = 3.320e-21
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPD+L+TLRN FWLG++ +AIAEG+ L RL + L VERDEF+YRSY+ LGQ+ +V+GEV
Sbjct:    1 MAEPDELYTLRNRFWLGNFSMAIAEGNQLSRLSDVLAVERDEFVYRSYIGLGQYGLVIGEV 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7S2BS69_9STRA (Coatomer subunit epsilon n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BS69_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.460e-20
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPDDL+TLRN+FWLG+YQ A+AEGS L RL + L++E  EFI+RSY+A+GQ +IVL EV
Sbjct:   10 MNEPDDLYTLRNNFWLGNYQRAVAEGSSLSRLSDPLKIECKEFIFRSYIAMGQCNIVLDEV 70          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7R9UFD7_9STRA (Coatomer subunit epsilon n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD7_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.380e-20
Identity = 37/61 (60.66%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M++PD+L+TLRNHF++G+YQLAI+E + L RLP  L+ E+DEF+YRSY+A+GQ  +VLGE+
Sbjct:    1 MADPDELYTLRNHFYVGNYQLAISEATNLNRLPPNLKAEKDEFLYRSYIAMGQPRVVLGEI 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7S2RZ95_9STRA (Coatomer subunit epsilon n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ95_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 8.820e-20
Identity = 39/61 (63.93%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPD+L++LRN FWLG++Q A++EGS L RLPE L++E  EF+YRSY+ALGQ +IVL EV
Sbjct:   13 MTEPDELYSLRNFFWLGAWQRAVSEGSSLTRLPEPLKIESREFVYRSYVALGQHNIVLSEV 73          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7S2F9R0_9STRA (Coatomer subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9R0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.060e-19
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPDDL+TLR  FWLG+YQ    E S L RLPEALR+E  EF+YRSY+A+GQ SIVL E+
Sbjct:    1 MAEPDDLYTLRTLFWLGNYQRVPVEASSLNRLPEALRIEVKEFVYRSYIAMGQHSIVLDEI 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: I0Z459_COCSC (Coatomer subunit epsilon n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z459_COCSC)

HSP 1 Score: 83.2 bits (204), Expect = 1.070e-17
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            MSEPD LF+LRNHF+LG+YQ AIAE S L  L EA ++ERD F+YRSY+ LG + +V+ EV
Sbjct:    1 MSEPDLLFSLRNHFYLGAYQAAIAEASDLEGLSEAEKIERDSFVYRSYIELGSYELVINEV 61          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: A0A7S4A6L7_9STRA (Coatomer subunit epsilon n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6L7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.370e-17
Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    2 SEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            ++PD+L+TLRN FWLGS+Q AI EG  L RL + L++ERDEF+YRSY+  GQ+++V+ EV
Sbjct:    4 TDPDELYTLRNLFWLGSFQQAINEGGRLNRLTDELKIERDEFVYRSYVGQGQYALVISEV 63          
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Match: H3GAC4_PHYRM (Coatomer subunit epsilon n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAC4_PHYRM)

HSP 1 Score: 79.7 bits (195), Expect = 2.140e-16
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLALGQFSIVLGEV 61
            M+EPDDLFTL+N  W+G+YQ A++EG+ L  + EALR ERD ++YR+ LALG FS+VL  V
Sbjct:    1 MAEPDDLFTLKNQLWVGNYQNALSEGAMLTHVSEALRHERDVYVYRAQLALGNFSVVLQNV 61          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103049.501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXM7_ECTSI3.390e-3498.36Coatomer subunit epsilon n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XUN8_9STRA3.920e-2470.49Coatomer subunit epsilon n=1 Tax=Fibrocapsa japoni... [more]
F0YDB8_AURAN3.320e-2163.93Coatomer subunit epsilon n=1 Tax=Aureococcus anoph... [more]
A0A7S2BS69_9STRA4.460e-2065.57Coatomer subunit epsilon n=1 Tax=Dictyocha speculu... [more]
A0A7R9UFD7_9STRA5.380e-2060.66Coatomer subunit epsilon n=1 Tax=Pinguiococcus pyr... [more]
A0A7S2RZ95_9STRA8.820e-2063.93Coatomer subunit epsilon n=1 Tax=Rhizochromulina m... [more]
A0A7S2F9R0_9STRA2.060e-1965.57Coatomer subunit epsilon n=1 Tax=Florenciella parv... [more]
I0Z459_COCSC1.070e-1762.30Coatomer subunit epsilon n=2 Tax=Coccomyxa TaxID=4... [more]
A0A7S4A6L7_9STRA1.370e-1758.33Coatomer subunit epsilon n=1 Tax=Pelagomonas calce... [more]
H3GAC4_PHYRM2.140e-1659.02Coatomer subunit epsilon n=10 Tax=Phytophthora Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..61
e-value: 2.5E-13
score: 52.4
NoneNo IPR availablePFAMPF04733Coatomer_Ecoord: 4..61
e-value: 8.9E-13
score: 48.3
NoneNo IPR availablePANTHERPTHR10805:SF0COATOMER SUBUNIT EPSILONcoord: 1..60
IPR006822Coatomer, epsilon subunitPANTHERPTHR10805COATOMER SUBUNIT EPSILONcoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103049contigEcto-sp8_S_contig103049:197..379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103049.501.1mRNA_Ecto-sp8_S_contig103049.501.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103049 197..379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103049.501.1 ID=prot_Ecto-sp8_S_contig103049.501.1|Name=mRNA_Ecto-sp8_S_contig103049.501.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=61bp
MSEPDDLFTLRNHFWLGSYQLAIAEGSGLGRLPEALRVERDEFIYRSYLA
LGQFSIVLGEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR006822Coatomer_esu