prot_Ecto-sp8_S_contig10288.480.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10288.480.1
Unique Nameprot_Ecto-sp8_S_contig10288.480.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length233
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10288.480.1 vs. uniprot
Match: D8LIG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG5_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 5.110e-110
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0 
Query:    1 MKTAALSLVALTCSCANAFTVSPAALRTQARGRSNTATSSTSLRMGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTPAPAKASKTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAAAPKPQGNINNLPKAL 232
            MKTAALSLVALTCSCANAFTVSPAALRTQARGRSNTATSSTSLRMGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTPAPAKA+KTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAAAPKPQGNINNLPKAL
Sbjct:    1 MKTAALSLVALTCSCANAFTVSPAALRTQARGRSNTATSSTSLRMGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTPAPAKAAKTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAAAPKPQGNINNLPKAL 232
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BLAST of mRNA_Ecto-sp8_S_contig10288.480.1 vs. uniprot
Match: A0A7S2V2P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2P5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.580e-29
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0 
Query:   40 STSLRMGWSL---KEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPT--NPSLYKTWTEKYGYGRFFPVYVDKSG 144
            STSL MG +     + +F+PSE WL +YLGE GLRY M+KT +E+  EGDY LL+++FGQTSNN  R++LK    AKA+  T       ++W  K+GYGRFFP YVDKSG
Sbjct:   32 STSLNMGGASVGGSDEEFVPSETWLADYLGENGLRYAMNKTPQELETEGDYPLLDRLFGQTSNNGARLELKKVARAKANSLTAEQEEEKQSWLSKFGYGRFFPAYVDKSG 141
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BLAST of mRNA_Ecto-sp8_S_contig10288.480.1 vs. uniprot
Match: A0A835YMI2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.430e-22
Identity = 51/108 (47.22%), Postives = 64/108 (59.26%), Query Frame = 0 
Query:   45 MGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTPAP 152
            M  +L+  DF+PSE ++ +YLG+ G+RY M KT +E+  EGDY   E IFGQTSNNA +M+LK +    A         K W  KYGY R FP YVD SG      AP
Sbjct:   34 MKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAP 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10288.480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIG5_ECTSI5.110e-11099.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2P5_9STRA2.580e-2953.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YMI2_9STRA3.430e-2247.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..232
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.725

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10288contigEcto-sp8_S_contig10288:1793..6483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10288.480.1mRNA_Ecto-sp8_S_contig10288.480.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10288 1793..6483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10288.480.1 ID=prot_Ecto-sp8_S_contig10288.480.1|Name=mRNA_Ecto-sp8_S_contig10288.480.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=233bp
MKTAALSLVALTCSCANAFTVSPAALRTQARGRSNTATSSTSLRMGWSLK
EADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNN
AERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSGLSDDTP
APAKASKTVAPKKAPAKKAAAKAAPRAAAVKASSRPAAKSAPKAKAAPKK
AAPKAAPKKAAPKVVAAAPKPQGNINNLPKAL*
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