prot_Ecto-sp8_S_contig102783.463.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102783.463.1
Unique Nameprot_Ecto-sp8_S_contig102783.463.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length103
Homology
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BLAST of mRNA_Ecto-sp8_S_contig102783.463.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.640e-45
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0 
Query:    1 QVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALERLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSP 91
            QVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALE+LRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSP
Sbjct:  172 QVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALEQLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSP 262
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BLAST of mRNA_Ecto-sp8_S_contig102783.463.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 2.340e-44
Identity = 89/91 (97.80%), Postives = 90/91 (98.90%), Query Frame = 0 
Query:    2 VPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALERLRDALKRATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPS 92
            VPENEGLDSDTTDSPLPEFLSNPDVRFEV PGDRAALRAALERLRDALK+ATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPS
Sbjct:  612 VPENEGLDSDTTDSPLPEFLSNPDVRFEVAPGDRAALRAALERLRDALKQATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPS 702
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102783.463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB0_ECTSI2.640e-4598.90NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LG27_9PHAE2.340e-4497.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102783contigEcto-sp8_S_contig102783:3..311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102783.463.1mRNA_Ecto-sp8_S_contig102783.463.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102783 3..311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102783.463.1 ID=prot_Ecto-sp8_S_contig102783.463.1|Name=mRNA_Ecto-sp8_S_contig102783.463.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=103bp
QVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALERLRDALK
RATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPSGGTVSGGD
VTG
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