prot_Ecto-sp8_S_contig102777.459.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102777.459.1
Unique Nameprot_Ecto-sp8_S_contig102777.459.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length110
Homology
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BLAST of mRNA_Ecto-sp8_S_contig102777.459.1 vs. uniprot
Match: D8LPE1_ECTSI (Hpt domain protein, EsV-1-113 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.920e-55
Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 0 
Query:    1 MENVLCVKEAVAMCDNDEKFMIEMIGLMRDDIAECLSLLAVAFNDNDSARTREIAHRVKGQAASMAAKDLMVKSKKVEYAAKNGFCTKTEYLSLVLSMKEFVRCTRDIV 109
            MENVLC++E VAMCDNDE FM EM+ LMR+DI ECLSLLA AFN+N+ ARTRE+AHRVKGQAASMAAKDLM+ SKKVE AAK GFCTKTEYLSLVLSMKEFVRCTRDIV
Sbjct:    1 MENVLCIQETVAMCDNDEIFMKEMVVLMRNDIVECLSLLAEAFNNNNPARTREVAHRVKGQAASMAAKDLMLHSKKVEDAAKIGFCTKTEYLSLVLSMKEFVRCTRDIV 109
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BLAST of mRNA_Ecto-sp8_S_contig102777.459.1 vs. uniprot
Match: Q8QNG6_ESV1K (EsV-1-113 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG6_ESV1K)

HSP 1 Score: 171 bits (432), Expect = 3.600e-53
Identity = 84/108 (77.78%), Postives = 99/108 (91.67%), Query Frame = 0 
Query:    1 MENVLCVKEAVAMCDNDEKFMIEMIGLMRDDIAECLSLLAVAFNDNDSARTREIAHRVKGQAASMAAKDLMVKSKKVEYAAKNGFCTKTEYLSLVLSMKEFVRCTRDI 108
            ME VLCVK A+ MCDNDE+F+ EM+GLMRDDI +CLSLLA AF+DNDS+RTRE+AHRVKGQAA +AAKDL+++SKKVE AAK GFCTKTEYLSLVL+MKEFVRCT+D+
Sbjct:    1 MEKVLCVKGALEMCDNDEEFLKEMVGLMRDDIMKCLSLLAEAFDDNDSSRTREVAHRVKGQAAMLAAKDLLLQSKKVEDAAKIGFCTKTEYLSLVLNMKEFVRCTKDV 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102777.459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPE1_ECTSI1.920e-5583.49Hpt domain protein, EsV-1-113 n=1 Tax=Ectocarpus s... [more]
Q8QNG6_ESV1K3.600e-5377.78EsV-1-113 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036641HPT domain superfamilyGENE3D1.20.120.160coord: 3..107
e-value: 9.2E-13
score: 50.5
IPR036641HPT domain superfamilySUPERFAMILY47226Histidine-containing phosphotransfer domain, HPT domaincoord: 13..107
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainPFAMPF01627Hptcoord: 23..80
e-value: 5.2E-6
score: 26.6
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainPROSITEPS50894HPTcoord: 17..109
score: 11.862

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102777contigEcto-sp8_S_contig102777:171..500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102777.459.1mRNA_Ecto-sp8_S_contig102777.459.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102777 171..500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102777.459.1 ID=prot_Ecto-sp8_S_contig102777.459.1|Name=mRNA_Ecto-sp8_S_contig102777.459.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=110bp
MENVLCVKEAVAMCDNDEKFMIEMIGLMRDDIAECLSLLAVAFNDNDSAR
TREIAHRVKGQAASMAAKDLMVKSKKVEYAAKNGFCTKTEYLSLVLSMKE
FVRCTRDIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036641HPT_dom_sf
IPR008207Sig_transdc_His_kin_Hpt_dom