prot_Ecto-sp8_S_contig102755.456.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102755.456.1
Unique Nameprot_Ecto-sp8_S_contig102755.456.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp8_S_contig102755.456.1 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.130e-44
Identity = 86/91 (94.51%), Postives = 87/91 (95.60%), Query Frame = 0 
Query:    1 HPALALARSLLGGVGAERTANKPPPMRVTRAVALRPLLEACSGPLSGQAGVALEVLVRVIHGSGVGLVFAGDKVGAIGARRRAEDGRDDDE 91
            HPALALARSLLGGVGAERT NKPPPMRVTRAVALRPLLEACSGPLSGQAGVALEVLVRVIHG+GVGLVFAGDKV  IGARRRAE GRDDDE
Sbjct:  522 HPALALARSLLGGVGAERTENKPPPMRVTRAVALRPLLEACSGPLSGQAGVALEVLVRVIHGTGVGLVFAGDKVRGIGARRRAEVGRDDDE 612
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BLAST of mRNA_Ecto-sp8_S_contig102755.456.1 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.950e-41
Identity = 83/93 (89.25%), Postives = 85/93 (91.40%), Query Frame = 0 
Query:    1 HPALALARSLLGGVGAERTANKPPPMRVTRAVALRPLLEACSGPLSGQAGVALEVLVRVIHGSGVGLVFAGDKVGAIGARRRAEDGRDDDESE 93
            HPALAL+RSLLGGVGAERT NKPPPMRVTRAVAL PLLEACSGPLSGQAGVALEVLVRVIHG+GVGLVFAGDKV  IGA RRAE  RDDD SE
Sbjct:  543 HPALALSRSLLGGVGAERTENKPPPMRVTRAVALPPLLEACSGPLSGQAGVALEVLVRVIHGTGVGLVFAGDKVSGIGAGRRAEVCRDDDLSE 635
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102755.456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFJ6_ECTSI1.130e-4494.51DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JFX0_9PHAE1.950e-4189.25DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102755contigEcto-sp8_S_contig102755:184..462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102755.456.1mRNA_Ecto-sp8_S_contig102755.456.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102755 184..463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102755.456.1 ID=prot_Ecto-sp8_S_contig102755.456.1|Name=mRNA_Ecto-sp8_S_contig102755.456.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=93bp
HPALALARSLLGGVGAERTANKPPPMRVTRAVALRPLLEACSGPLSGQAG
VALEVLVRVIHGSGVGLVFAGDKVGAIGARRRAEDGRDDDESE
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