prot_Ecto-sp8_S_contig10265.444.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10265.444.1
Unique Nameprot_Ecto-sp8_S_contig10265.444.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 4.040e-30
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ 60
            RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ
Sbjct:   92 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ 151          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: W7TN96_9STRA (Zinc finger ran-binding domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN96_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.760e-15
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRR---RQVQI 63
            R   +  F  +  CR+ ++ ITAGG GLD  AAS  VFVELP SP WLRQAEDRLHRR   R+VQI
Sbjct:  822 RQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQI 887          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A6N2LV08_SALVM (Helicase C-terminal domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LV08_SALVM)

HSP 1 Score: 72.0 bits (175), Expect = 1.090e-13
Identity = 32/60 (53.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ 60
            R + +S F ++++ ++ ++SITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q
Sbjct:  123 RQNAVSSFQSSDKVKIAIISITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQ 182          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A6N2LUF3_SALVM (Helicase C-terminal domain-containing protein n=2 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LUF3_SALVM)

HSP 1 Score: 70.5 bits (171), Expect = 7.390e-13
Identity = 31/56 (55.36%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    5 LSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ 60
            +S F ++++ ++ ++SITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q
Sbjct:  152 VSSFQSSDKVKIAIISITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQ 207          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A836XNS5_9ROSI (DNA annealing helicase and endonuclease ZRANB n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836XNS5_9ROSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-12
Identity = 31/60 (51.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQ 60
            R + +S F ++++ ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q
Sbjct:  527 RQNAVSSFQSSDKVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQ 586          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A6A6MJY6_HEVBR (Uncharacterized protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MJY6_HEVBR)

HSP 1 Score: 68.2 bits (165), Expect = 7.430e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQV 61
            R S +  F ++   ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q 
Sbjct:  538 RQSAVHSFQSSNEVKIAIIGITAGGIGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 598          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A6J1C2S2_MOMCH (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1C2S2_MOMCH)

HSP 1 Score: 68.2 bits (165), Expect = 7.440e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQV 61
            R S +  F ++   ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q 
Sbjct:  575 RQSAVLSFQSSSEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 635          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A5N6RQ55_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6RQ55_9ROSI)

HSP 1 Score: 68.2 bits (165), Expect = 7.440e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQV 61
            R S +  F ++   ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q 
Sbjct:  567 RQSAVLSFRSSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 627          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A2C9VPB2_MANES (Uncharacterized protein n=3 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VPB2_MANES)

HSP 1 Score: 68.2 bits (165), Expect = 7.440e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQV 61
            R S +  F ++   ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q 
Sbjct:  554 RQSAVLSFQSSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 614          
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Match: A0A067ETM0_CITSI (Uncharacterized protein n=7 Tax=Citrus TaxID=2706 RepID=A0A067ETM0_CITSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.010e-11
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    1 RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQAEDRLHRRRQV 61
            R S +  F  +   ++ ++ ITAGG GLDF++A NVVF+ELP+SP+ + QAEDR HRR Q 
Sbjct:  569 RQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 629          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10265.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJH7_ECTSI4.040e-30100.00Chromatin remodeling complex subunit n=1 Tax=Ectoc... [more]
W7TN96_9STRA7.760e-1559.09Zinc finger ran-binding domain-containing protein ... [more]
A0A6N2LV08_SALVM1.090e-1353.33Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6N2LUF3_SALVM7.390e-1355.36Helicase C-terminal domain-containing protein n=2 ... [more]
A0A836XNS5_9ROSI1.140e-1251.67DNA annealing helicase and endonuclease ZRANB n=1 ... [more]
A0A6A6MJY6_HEVBR7.430e-1250.82Uncharacterized protein n=3 Tax=Hevea brasiliensis... [more]
A0A6J1C2S2_MOMCH7.440e-1250.82DNA annealing helicase and endonuclease ZRANB3 n=1... [more]
A0A5N6RQ55_9ROSI7.440e-1250.82Uncharacterized protein n=1 Tax=Carpinus fangiana ... [more]
A0A2C9VPB2_MANES7.440e-1250.82Uncharacterized protein n=3 Tax=Manihot esculenta ... [more]
A0A067ETM0_CITSI1.010e-1150.82Uncharacterized protein n=7 Tax=Citrus TaxID=2706 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 3..58
e-value: 4.8E-8
score: 33.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..63
e-value: 2.6E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 3..61
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10265contigEcto-sp8_S_contig10265:6237..6425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10265.444.1mRNA_Ecto-sp8_S_contig10265.444.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10265 6237..6425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10265.444.1 ID=prot_Ecto-sp8_S_contig10265.444.1|Name=mRNA_Ecto-sp8_S_contig10265.444.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
RASRLSEFNTNERCRVLVVSITAGGQGLDFTAASNVVFVELPESPAWLRQ
AEDRLHRRRQVQI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase