prot_Ecto-sp8_S_contig10257.431.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10257.431.1
Unique Nameprot_Ecto-sp8_S_contig10257.431.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10257.431.1 vs. uniprot
Match: A0A835Z6S0_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.690e-7
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    6 GVSVLGLGALNKAEFINRGGEDVLDAFMPRTTR 38
            G+ VLGLGALNKAEFINRGG+D L A  P+ TR
Sbjct:   77 GIQVLGLGALNKAEFINRGGDDTLSAVRPKFTR 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10257.431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z6S0_9STRA3.690e-772.73GH26 domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10257contigEcto-sp8_S_contig10257:258..374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10257.431.1mRNA_Ecto-sp8_S_contig10257.431.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10257 258..374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10257.431.1 ID=prot_Ecto-sp8_S_contig10257.431.1|Name=mRNA_Ecto-sp8_S_contig10257.431.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=39bp
MPVFSGVSVLGLGALNKAEFINRGGEDVLDAFMPRTTR*
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