prot_Ecto-sp8_S_contig10231.376.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10231.376.1
Unique Nameprot_Ecto-sp8_S_contig10231.376.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length142
Homology
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: D8LPT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT5_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 5.640e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 86
            MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG
Sbjct:   53 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 138          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A6H5KN34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN34_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.470e-51
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 86
            MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFED RDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG
Sbjct:   61 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDPRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 146          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: D8LB97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB97_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 7.480e-35
Identity = 61/87 (70.11%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKRE-FGGGFG 86
            M+R+YIGNLPMD+ EKD++D+FYK+G+I D+ LK P RPPAFGF+TF+D+RDA+EAVRARDGYD DG RLRVE+SRG+R+ FG G G
Sbjct:    1 MARIYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGYDMDGSRLRVEISRGRRDPFGMGGG 87          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A7S3UTA7_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTA7_HETAK)

HSP 1 Score: 118 bits (295), Expect = 3.950e-31
Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 86
            MSR+YIGNLP+D+ E+++ED+FYKYG+I  + +K P RPPAF FV FED+RDA++AV  RDGYDFDG R+RVE+S G+   GG  G
Sbjct:   22 MSRIYIGNLPIDITEREIEDLFYKYGRIIQISVKNPSRPPAFAFVEFEDARDAEDAVYGRDGYDFDGERIRVEISHGRDRGGGXXG 107          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A7S2B3I3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3I3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 5.170e-31
Identity = 49/77 (63.64%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    3 RLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKR 79
            R+++GNLPMD++E+D+ED+FYKYG+++D+ LK P RPPAF F+TF+D RDAD+AVR RDGY   G RLRVE+ RG+R
Sbjct:    8 RIFVGNLPMDIRERDIEDLFYKYGRMSDIHLKTPSRPPAFAFITFDDRRDADDAVRGRDGYSLGGERLRVEIVRGRR 84          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A7S3LZ23_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZ23_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.070e-31
Identity = 51/82 (62.20%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    2 SRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGG 83
            +R+Y+GNLP+D++E +L+D+FYKYGKI D+ LK P RPPAF F+ F+D RDA +A+R RD Y+FDGYRLRVE S+G R  GG
Sbjct:   14 NRIYVGNLPLDIRESELDDLFYKYGKIRDIDLKTPARPPAFAFIAFDDYRDAQDAIRGRDNYNFDGYRLRVEFSKGDRRAGG 95          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A7S0YR52_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YR52_9CRYP)

HSP 1 Score: 115 bits (288), Expect = 1.650e-30
Identity = 52/86 (60.47%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFG 86
            M+++Y+GNLP+D + +D+ED+F+KYG+I D+ LK P RPPAF FVTFE + DA++A+R RDG DF+G RLRVEMSR     GGGFG
Sbjct:   26 MAKVYVGNLPLDCRVRDIEDLFWKYGRIRDIDLKTPSRPPAFAFVTFESTMDAEDAIRGRDGVDFEGQRLRVEMSRAS---GGGFG 108          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A835YQ88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ88_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.230e-30
Identity = 52/79 (65.82%), Postives = 69/79 (87.34%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKR 79
            M+R+Y+GNLPM+++EKD+ED+FYK+G+I D+ LK P RPPAF FV F+D RDA++AVRARDGY+ DG RLRVE++RG R
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKFGRIRDIDLKTPARPPAFAFVAFDDVRDAEDAVRARDGYEMDGERLRVELARGAR 79          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A836CC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC30_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.570e-30
Identity = 54/84 (64.29%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    1 MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKREFGGG 84
            M+R+Y+GNLPM+++EKD+ED+FYKYG+I D+ LK P RPP+F FV FED RDA++AV  RDGY+ DG RLRVE++RG RE G G
Sbjct:    1 MARVYVGNLPMNVREKDVEDLFYKYGRIRDIDLKTPARPPSFAFVAFEDVRDAEDAVSGRDGYEMDGQRLRVELARGARERGFG 84          
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Match: A0A453FB95_AEGTS (RRM domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453FB95_AEGTS)

HSP 1 Score: 115 bits (287), Expect = 5.100e-30
Identity = 48/76 (63.16%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    4 LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEMSRGKR 79
            +Y+GNLP D++E+++ED+FYKYG+I D+ LK+P RPP + FV FED RDAD+A+  RDGYDFDGYRLRVE++ G R
Sbjct:    9 IYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAHGGR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10231.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT5_ECTSI5.640e-53100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN34_9PHAE1.470e-5198.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB97_ECTSI7.480e-3570.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3UTA7_HETAK3.950e-3161.63Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2B3I3_9STRA5.170e-3163.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3LZ23_9STRA8.070e-3162.20Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0YR52_9CRYP1.650e-3060.47Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A835YQ88_9STRA2.230e-3065.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CC30_9STRA2.570e-3064.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A453FB95_AEGTS5.100e-3063.16RRM domain-containing protein n=1 Tax=Aegilops tau... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 3..73
e-value: 1.6E-21
score: 87.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 4..71
e-value: 1.0E-18
score: 66.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 2..77
score: 18.155
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..83
e-value: 7.1E-25
score: 89.2
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 4..89
NoneNo IPR availablePANTHERPTHR23147:SF140coord: 4..89
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10231contigEcto-sp8_S_contig10231:1404..2153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10231.376.1mRNA_Ecto-sp8_S_contig10231.376.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10231 1404..2989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10231.376.1 ID=prot_Ecto-sp8_S_contig10231.376.1|Name=mRNA_Ecto-sp8_S_contig10231.376.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=142bp
MSRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDS
RDADEAVRARDGYDFDGYRLRVEMSRGKREFGGGFGGGGFGGGGYGGGGG
GYGGGGGGGYGGGGGHGGGGGYGGGMGPPRGGFGGGKCMRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf