prot_Ecto-sp8_S_contig10216.355.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10216.355.1
Unique Nameprot_Ecto-sp8_S_contig10216.355.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10216.355.1 vs. uniprot
Match: A0A6H5K9K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K3_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.580e-19
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0 
Query:   70 AKKARKSPARNGTNNCKTVSVQSRLKSFPGQGFTISNGKLYCGPCTRELSNDMDTVKTHIGQQKSRKAGSVNRHE 144
            AKK R+SP +NGTNN  T++ Q R++ F  QG  +SNG ++C PC ++LSND DT+KTH G  KSRK GS+  HE
Sbjct:   51 AKKTRRSPGKNGTNNATTITPQERVRKFKNQGLIVSNGHVFCEPCGKQLSNDSDTIKTHCGLAKSRKEGSIILHE 125
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BLAST of mRNA_Ecto-sp8_S_contig10216.355.1 vs. uniprot
Match: A0A7S3EV18_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EV18_9EUKA)

HSP 1 Score: 52.4 bits (124), Expect = 4.530e-5
Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:   88 VSVQSRLKSFPGQGFTISNGKLYCGPCTRELSNDMDTVKTHIGQQK 133
            VSV+ RL+ FPGQG   S G ++C PC  +L N   ++K H+ ++K
Sbjct:  177 VSVEQRLREFPGQGLRNSAGVVFCAPCKEQLPNIKGSIKDHVSRRK 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10216.355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9K3_9PHAE3.580e-1954.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3EV18_9EUKA4.530e-543.48Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10216contigEcto-sp8_S_contig10216:974..1405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10216.355.1mRNA_Ecto-sp8_S_contig10216.355.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10216 974..1405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10216.355.1 ID=prot_Ecto-sp8_S_contig10216.355.1|Name=mRNA_Ecto-sp8_S_contig10216.355.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp
APAASPAAAPALAAATVTAPSGPLSSWTVEKDSNQATDLFAHHLPKPSSQ
ARQRTETHTKRGGSAEGGQAKKARKSPARNGTNNCKTVSVQSRLKSFPGQ
GFTISNGKLYCGPCTRELSNDMDTVKTHIGQQKSRKAGSVNRHE
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