prot_Ecto-sp8_S_contig102119.347.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102119.347.1
Unique Nameprot_Ecto-sp8_S_contig102119.347.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length68
Homology
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BLAST of mRNA_Ecto-sp8_S_contig102119.347.1 vs. uniprot
Match: D8LCD2_ECTSI (CBM_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 6.480e-26
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 
Query:    1 GLFDGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGNFRISINVPNFARV 50
            GLF+GADSLLYCGGFNGWDGEEDGVTMPMMP GDEGNFRISINVPNFARV
Sbjct:  121 GLFEGADSLLYCGGFNGWDGEEDGVTMPMMPAGDEGNFRISINVPNFARV 170
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BLAST of mRNA_Ecto-sp8_S_contig102119.347.1 vs. uniprot
Match: A0A835YX15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX15_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.900e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:    9 LLYCGGFNGWDGEEDGVTMPMMPVGDEGNFRISINVPNFAR 49
            L YCGG+NGWDGEE  V +P++   D G ++ SI +PNFA+
Sbjct:   46 LFYCGGYNGWDGEETPVMVPLLRQRD-GRYKASITIPNFAK 85
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BLAST of mRNA_Ecto-sp8_S_contig102119.347.1 vs. uniprot
Match: A0A1X6PBW0_PORUM (CBM_25 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBW0_PORUM)

HSP 1 Score: 50.1 bits (118), Expect = 2.120e-5
Identity = 31/67 (46.27%), Postives = 37/67 (55.22%), Query Frame = 0 
Query:    1 GLFDGADSLLYCGGFNGWDGEEDGVTMPMMPVGD--EGNFRISINVPNFARVSKCFGGVLSQAFGGV 65
            GLF   D + Y GGFNGW  E D  T  + P      G++R+S+ VPNFARV   F  V   A GGV
Sbjct:  101 GLFTEDDVVCYAGGFNGWSSETD-TTPLLFPAQSLFNGSYRVSVVVPNFARVLD-FAFVQDAAAGGV 165
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102119.347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCD2_ECTSI6.480e-2696.00CBM_25 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YX15_9STRA2.900e-653.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X6PBW0_PORUM2.120e-546.27CBM_25 domain-containing protein n=1 Tax=Porphyra ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102119contigEcto-sp8_S_contig102119:1..204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102119.347.1mRNA_Ecto-sp8_S_contig102119.347.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102119 1..204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102119.347.1 ID=prot_Ecto-sp8_S_contig102119.347.1|Name=mRNA_Ecto-sp8_S_contig102119.347.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=68bp
GLFDGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGNFRISINVPNFARV
SKCFGGVLSQAFGGVLA*
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