prot_Ecto-sp8_S_contig10211.346.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10211.346.1
Unique Nameprot_Ecto-sp8_S_contig10211.346.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length117
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10211.346.1 vs. uniprot
Match: D7FZJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ4_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 7.540e-42
Identity = 101/119 (84.87%), Postives = 102/119 (85.71%), Query Frame = 0 
Query:    1 WVALTDWTYVLTLPRECWGVDPPRDGXXXXXXXXXXXXXXXXXXXX--EDGDCGGRESRASAHEGGEASASLTAAAVGLLTFEGIDTFATIRVNGREIGRWSNQFMPATFALSGGILSE 117
            WVALTDWTYVLTLPR CW VDPPRDGXXXXXXXXXXX    XXXXX  EDGDCGGR  RASAHEGGEA     AAAVGLLTFEGIDTFAT+ VNG EIGRWSNQFMPATFALSGGILSE
Sbjct:   80 WVALTDWTYVLTLPRACWVVDPPRDGXXXXXXXXXXXCVDSXXXXXXXEDGDCGGRVRRASAHEGGEA----PAAAVGLLTFEGIDTFATVSVNGEEIGRWSNQFMPATFALSGGILSE 194
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10211.346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZJ4_ECTSI7.540e-4284.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 75..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10211contigEcto-sp8_S_contig10211:4151..4899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10211.346.1mRNA_Ecto-sp8_S_contig10211.346.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10211 4151..4901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10211.346.1 ID=prot_Ecto-sp8_S_contig10211.346.1|Name=mRNA_Ecto-sp8_S_contig10211.346.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=117bp
WVALTDWTYVLTLPRECWGVDPPRDGGGGGGGRGGCVDSAGGGGGSEDGD
CGGRESRASAHEGGEASASLTAAAVGLLTFEGIDTFATIRVNGREIGRWS
NQFMPATFALSGGILSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf