prot_Ecto-sp8_S_contig10207.339.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10207.339.1
Unique Nameprot_Ecto-sp8_S_contig10207.339.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length486
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10207.339.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 3.940e-89
Identity = 349/477 (73.17%), Postives = 355/477 (74.42%), Query Frame = 0 
Query:    9 RGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQPGVLLVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSVYGAAVPGHAMYAAQGYVDPAQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPHHXXHVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLPTXXXXXQQGQQQQPXXXXXXXXXPQTGLLQTPQVPTSLAMTSGYMTAQDFYASQQPQQAIYYPQDPSMQGVAMGYTVQQPHLAHHPHQQAFVVPVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGAGXXXXXXXXXXXXANRGYQSDFPPLN 485
            RGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYD+YRPSFAPYRQLADPGGG GG    XXXXXXXXXXX               AMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ     +  XXXXXXXXX                     APSVYGAAVPGHAMYAAQGYVDPAQAAXXXXXXXXXXXXXX     XXX                                  ++  XXXXXXXXX     XXXXXXXXXXXXXXX  X   P       +GQQQQPXXXXXXX   QTGLLQTPQVPTSLAMTSGYMTAQDFY +QQPQQAIYYPQDPSMQGVAMGYTVQQPHLAHHPHQQAFVVPVQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           GRGAGXXXXXXXXXXXXANRGYQSDFPPLN
Sbjct:  574 RGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLADPGGGGGG-GRGXXXXXXXXXXXQQPQPSPRLLQQHPHAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQMEAQAMXXXXXXXXXXXGG-------------------APSVYGAAVPGHAMYAAQGYVDPAQAAXXXXXXXXXXXXXXAPGVSXXXGST-------------------------------MRGQXXXXXXXXXQPRQHXXXXXXXXXXXXXXXQPXXXXPAAH----RGQQQQPXXXXXXX---QTGLLQTPQVPTSLAMTSGYMTAQDFYGAQQPQQAIYYPQDPSMQGVAMGYTVQQPHLAHHPHQQAFVVPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GRGAGXXXXXXXXXXXXANRGYQSDFPPLN 981
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BLAST of mRNA_Ecto-sp8_S_contig10207.339.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 4.650e-42
Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:   12 RRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 133
            RRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGG RGGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ
Sbjct:  694 RRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGG-RGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 814
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10207.339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC01_9PHAE3.940e-8973.17SUZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LM72_ECTSI4.650e-4298.36R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10207contigEcto-sp8_S_contig10207:4395..6930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10207.339.1mRNA_Ecto-sp8_S_contig10207.339.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10207 4395..6930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10207.339.1 ID=prot_Ecto-sp8_S_contig10207.339.1|Name=mRNA_Ecto-sp8_S_contig10207.339.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=486bp
GGGGGGGGRGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPS
FAPYRQLADPGGGRGGRGGGRDGPGGQQPQPSPRLLQQHPQQQQQHAMMS
AAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQPGVLLVQQQQPWQQHQQ
QMEAQAMAAAAAAAAAAAGGGAPSVYGAAVPGHAMYAAQGYVDPAQAAAA
AAAAAAAAAATGGAAPGASGVAGSTMRGQQQHHHHQPRQQQQQQQQQQPH
HQQHVQHHQQPHAQQPAAHHVQQQQQHLSYIHPQQQQQQPGLLPTTTQQQ
QQGQQQQPQQQPQQQPQPQTGLLQTPQVPTSLAMTSGYMTAQDFYASQQP
QQAIYYPQDPSMQGVAMGYTVQQPHLAHHPHQQAFVVPVQQQQQQTQPQQ
QQQQQQPQHHPYQHHVYPVGAMQQQPVPQQHRQQQQQQQHGNHQQQHHQG
GGGGGGRGAGRGGGGAGGGRGGANRGYQSDFPPLN*
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