prot_Ecto-sp8_S_contig10204.335.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10204.335.1
Unique Nameprot_Ecto-sp8_S_contig10204.335.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10204.335.1 vs. uniprot
Match: D7FM36_ECTSI (Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM36_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.940e-47
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0 
Query:    1 GIGARVGETTTGDGDDANTNLLEPTSPPQTFDTRFSSMANLADAENGGLDGLDGSPAGSTDSDRGETPEPLENRADIPGCEESGGSERPHQR 92
            GIGARVGET TGDGDDANTNLLEPTSPPQTFD+RFSSMANLADAENGGLDGLDGSPAGSTDSDRG TPEPLENRADI GCEESGGSERPHQR
Sbjct:  470 GIGARVGETATGDGDDANTNLLEPTSPPQTFDSRFSSMANLADAENGGLDGLDGSPAGSTDSDRGVTPEPLENRADIRGCEESGGSERPHQR 561
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BLAST of mRNA_Ecto-sp8_S_contig10204.335.1 vs. uniprot
Match: A0A6H5L5F9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5F9_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.460e-44
Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0 
Query:    1 GIGARVGETTTGDGDDANTNLLEPTSPPQTFDTRFSSMANLADAENGGLDGLDGSPAGSTDSDRGETPEPLENRADIPGCEESGGSERPHQR 92
            GIGARVG+TT GDGDDA+TNLL+PT PPQTFDTRFSSMANL+DAENGGLDGLDGSPA STDSDRG  PEP ENRAD PGCEESGGSERPHQR
Sbjct:    4 GIGARVGDTTNGDGDDADTNLLDPTGPPQTFDTRFSSMANLSDAENGGLDGLDGSPARSTDSDRGVRPEPHENRADTPGCEESGGSERPHQR 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10204.335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM36_ECTSI2.940e-4795.65Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectoc... [more]
A0A6H5L5F9_9PHAE1.460e-4488.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10204contigEcto-sp8_S_contig10204:5819..6094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10204.335.1mRNA_Ecto-sp8_S_contig10204.335.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10204 5819..6096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10204.335.1 ID=prot_Ecto-sp8_S_contig10204.335.1|Name=mRNA_Ecto-sp8_S_contig10204.335.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=92bp
GIGARVGETTTGDGDDANTNLLEPTSPPQTFDTRFSSMANLADAENGGLD
GLDGSPAGSTDSDRGETPEPLENRADIPGCEESGGSERPHQR
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