prot_Ecto-sp8_S_contig10191.314.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10191.314.1
Unique Nameprot_Ecto-sp8_S_contig10191.314.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length342
Homology
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: D8LHZ2_ECTSI (Denticleless homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ2_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 7.260e-247
Identity = 335/339 (98.82%), Postives = 338/339 (99.71%), Query Frame = 0
Query:    4 PGSSRRGAPAGRHGHGSRYEMSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPPLLS 342
            PGSSRRGAPAGRHG+GSRYEMSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGH VAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGA+SAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETC+EVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPPLLS
Sbjct:   10 PGSSRRGAPAGRHGYGSRYEMSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHFVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAISAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCMEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPPLLS 348          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A6H5JP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP24_9PHAE)

HSP 1 Score: 673 bits (1736), Expect = 2.380e-241
Identity = 324/340 (95.29%), Postives = 330/340 (97.06%), Query Frame = 0
Query:    3 RPGSSRRGAPAGRHGHGSRYEMSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPPLLS 342
            R  SSRRGAPAG HG+GSRY+MSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSS WFSERAAKRLGA SAGVKHGYCRSWGVRQPGVVAQYRAL NCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCV+LSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSA+AW PANRLQRR+LTPVEQVFM HYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQ FLTAGQDGL+KLWDTRYVHHPLQEADPDDESAS PLLS
Sbjct:    3 RTSSSRRGAPAGPHGYGSRYKMSDYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSDWFSERAAKRLGA-SAGVKHGYCRSWGVRQPGVVAQYRALVNCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVILSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSALAWTPANRLQRRLLTPVEQVFMAHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQTFLTAGQDGLIKLWDTRYVHHPLQEADPDDESASLPLLS 341          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A2P6S5R7_ROSCH (Putative transcription factor WD40-like family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6S5R7_ROSCH)

HSP 1 Score: 102 bits (254), Expect = 1.980e-20
Identity = 90/323 (27.86%), Postives = 124/323 (38.39%), Query Frame = 0
Query:   18 HGSRYEMSDYVMGLASP----GAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADPDDES 335
            HGSR     Y+  LAS     GA       P   + F K + + H+VA   E G L + DTR +                      FS  A+ R  A    V       W V Q           N +FD+ W+ DD +I  A  D  ++V D +      VL GH GSVK++S +P +  +++SG+RDGSFA+WD R                           N L    + P   V   H T    P+  RS                 G+    ++TSV  + D     TAG  D +VK WDTR +   + +  P  ES
Sbjct:   19 HGSRVPKRSYIDCLASDFSEIGAIAAEHNGPPMAISFGKTSRNSHIVAMSDEDGYLSLFDTRRK----------------------FSASASHRENADRTKVY-----DWVVHQ-----------NAVFDICWIKDDTQIVTASGDQTVKVWDIQEKKCTAVLVGHTGSVKSLSPHPTNPEIIVSGSRDGSFALWDMRCNS---------------------TSKNTLAELCICPTAVVNGAHLT----PRAKRSRR---------------GKAAPRSITSVLNLKDEVSIATAGAVDSVVKFWDTRSLKSIVTQTCPHMES 263          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A4Y1R8X6_PRUDU (Transducin/WD40 repeat-like superfamily protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R8X6_PRUDU)

HSP 1 Score: 97.8 bits (242), Expect = 4.330e-19
Identity = 86/334 (25.75%), Postives = 126/334 (37.72%), Query Frame = 0
Query:   18 HGSRYEMSDYVMGLASP----GAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVV----AEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADPDDESASPPLLS 342
            HG R     Y+ GLAS     GA       P   + F K   +  +VA   E G L + DTR +                  +S  F E A K                        V  + A  N +FDV W+ DD +I  A  D  I+V D +      +L GH GSVK++  +P +  +++SG+RDGSFA+WD R       K +   +     A    A  +  A R++R                                          G+  + ++TSV ++ D     TAG  D +VK WDTR + + + +  P  ES    +LS
Sbjct:   72 HGFRAPKRPYINGLASDFNEIGAIAAEHNGPPMAISFGKTCKNSDIVAMSDEDGYLSLFDTRRKF----------------SASASFQENADKTK----------------------VCDWVAHQNAVFDVCWIKDDTQIMTASGDQTIKVWDIQEKKCTAILMGHTGSVKSLCPHPTNPEIIVSGSRDGSFALWDMRCNSSS--KNIHGEIAICSTAVVKGAHLFPRAKRVRR------------------------------------------GKAASMSITSVLYLKDEVSIATAGAVDSIVKFWDTRSLKNVVTQTSPHLESTEKSVLS 323          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: M5XBK0_PRUPE (Uncharacterized protein n=8 Tax=Prunus TaxID=3754 RepID=M5XBK0_PRUPE)

HSP 1 Score: 95.1 bits (235), Expect = 6.290e-18
Identity = 84/327 (25.69%), Postives = 123/327 (37.61%), Query Frame = 0
Query:   18 HGSRYEMSDYVMGLASP----GAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVV----AEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADPDDES 335
            HG R     Y+ GLAS     GA       P   + F K   +  +VA   E G L + DTR +                  +S  F E A K                        V  + A  N +FDV W+ DD +I  A  D  I+V D +      +L GH GSVK++  +P +  +++SG+RDGSFA+WD R       K +   +     A    A  +  A R++R                                          G+  + ++TSV ++ D     TAG  D +VK WDTR + + + +  P  ES
Sbjct:   19 HGFRAPKRPYINGLASDFHEIGAIAAEHNGPPMAISFGKTCKNSDIVAMSDEDGYLSLFDTRRKF----------------SASASFQENADKTK----------------------VCDWVAHQNAVFDVCWIKDDTQIMTASGDQTIKVWDIQEKKCTAILMGHTGSVKSLCPHPTNPEIIVSGSRDGSFALWDMRCNSSS--KNIHGEIAICSTAVVKGAHLFPRAKRVRR------------------------------------------GKAASMSITSVLYLKDEVSIATAGAVDSIVKFWDTRSLKNVVTQTSPHLES 263          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A388LAS4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LAS4_CHABU)

HSP 1 Score: 95.5 bits (236), Expect = 6.460e-18
Identity = 84/301 (27.91%), Postives = 113/301 (37.54%), Query Frame = 0
Query:   38 PCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAG-QDGLVKLWDTRYVHHPLQEADPDDESAS 337
            P    +P + L FSK    G L+A   E G + I DTR                   R   + +E   K        VK              VAQ+ A  N IFDV W   D  +  A  D  +R+ D ET  E  V++GH GSVK++S +P       SG+RDGS  +WD R  +   +                       Q     P E +   H +         S  R     KG   G         +VT+V ++ D     TAG  DG+VK WD R   HP+ +  P  E +S
Sbjct:   70 PAGSNTPPFGLAFSKVKQGGALLAVADEEGFVSIHDTR-------------------RRFPFVNETRGKD------DVK--------------VAQWIAHNNAIFDVAWTRADTVLLTASGDQSVRMWDVETRKETAVMKGHTGSVKSLSVSPTQQDCFASGSRDGSVMLWDVRCGEAYSINN---------------------QESFFRPFEVIVDAHLS---------SKTRKHRRRKGSVQG-----DPKQSVTAVLYLYDENLLATAGASDGVVKFWDVRNTKHPVMQT-PHSEGSS 295          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A2C9U7Y3_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9U7Y3_MANES)

HSP 1 Score: 94.7 bits (234), Expect = 8.390e-18
Identity = 74/298 (24.83%), Postives = 126/298 (42.28%), Query Frame = 0
Query:   41 EGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADPDDESAS 337
            E +P   + F+K + + H++A   E G L + DTR         N P    Q +     +S+++                          ++ + A  N IFD+ W+ +D  +  A  D  I+V D +      VL GH GS+K+I  +P ++ +++SG+RDGSFA+WD R +                      A  NR     +TP   +   H +  +  ++ R                   +  + ++TSV ++ DG    TAG  D +VK WDTRY+   + +A P  +S++
Sbjct:   44 EETPPLAISFAKSSKNSHVLAVSDEDGYLSLFDTRK--------NFPPYASQQE-----YSDKSR-------------------------ISDWEAHQNAIFDICWIKEDTNLLTASGDQTIKVWDAQKQKCTGVLMGHTGSIKSIYCHPTNSDLLVSGSRDGSFAMWDLRCKN---------------------ASKNRRTEACITPTTMIRRAHLSP-QSKRVRRK------------------KAASMSITSVLYLKDGISIATAGAVDSIVKFWDTRYLKAQVTQACPRPKSST 263          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: UPI000870AF94 (denticleless protein homolog n=1 Tax=Pyrus x bretschneideri TaxID=225117 RepID=UPI000870AF94)

HSP 1 Score: 94.0 bits (232), Expect = 1.560e-17
Identity = 84/327 (25.69%), Postives = 121/327 (37.00%), Query Frame = 0
Query:   18 HGSRYEMSDYVMGLASP----GAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRV----VAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADPDDES 335
            HG R     YV GL S     GA       P  ++ F K     H++A   E G L + DTR++      H                 E A K                        V  + A  N +FD+ W+ DD +I  A  D  I+V D +      +L GH GSVK++  +P +  V++SG+RDGSFA+WD R       K +   V     A    A     A R++RR                                          +  + ++TSV ++ D     TAG  D +VK WDTR + + + +  P  ES
Sbjct:   19 HGFRARKRRYVNGLESDFYEIGAIAAEHNGPPMSISFGKTWKSSHIIAMSDEDGYLSLFDTRSKFSASASHQ----------------ENADKTK----------------------VCDWVAHHNTVFDICWIKDDTQIMTASGDQTIKVWDIQEKKCTAILMGHTGSVKSLCPHPTNPEVIVSGSRDGSFALWDMRCTSSS--KNMQGEVSICSTAVVKGAHIVPRAKRVRRR------------------------------------------KAVSMSITSVLYLKDEVSIATAGAVDSVVKFWDTRSLKNVVTQTCPQPES 263          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A0K9RSK0_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RSK0_SPIOL)

HSP 1 Score: 92.8 bits (229), Expect = 3.840e-17
Identity = 74/290 (25.52%), Postives = 120/290 (41.38%), Query Frame = 0
Query:   43 SPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEADP 331
            +P  ++ F+K   + H++    E G +  +DTR +                       +  A ++  A  A                +V+++ A  N ++D+ W  DD  +  A AD  I++ D E      +L+GHEGSVK++S +P ++ +V+SG+RDGSFA+WD R                + +  M W          +T  EQV   H +  +               K   +        + TVTSV ++ D     TAG  D +VK WDTR +  P  +A P
Sbjct:   57 TPPMSVSFAKTIRNAHILGVTDEDGYVNFIDTRLK----------------------LNPSATEQENAEKA----------------IVSRWVAHENSVYDICWTKDDTSVLTASADHTIKLWDVEQKKCYGLLKGHEGSVKSVSCHPTNSDLVVSGSRDGSFALWDLR---------------CKPHQGMEW----------ITSTEQVKGAHASAKQ---------------KRSRNKKAASPLPSRTVTSVLYLKDEISIATAGAVDSVVKFWDTRNLRAPAAQASP 268          
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Match: A0A251S822_HELAN (Putative coatomer beta' subunit (COPB2), WD40 repeat, conserved site n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S822_HELAN)

HSP 1 Score: 90.9 bits (224), Expect = 8.660e-17
Identity = 76/288 (26.39%), Postives = 121/288 (42.01%), Query Frame = 0
Query:   43 SPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWFSERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMPDGQKFLTAGQ-DGLVKLWDTRYVHHPLQEA 329
            SP   L F K + + H++A   E G + + +TR         N P     +  +S   +E+A K                          ++ A  N +FD+ W+ DD  +  AC D  I+V D++    +  L GH GSVK+ISA+P ++ +++SG+RDGSFA+WD R                  + +    P       +L  ++ V   H               M  +VK         +  + +VTSV +M D     TAG  D ++K WDTR +  P+ +A
Sbjct:   52 SPPMALSFCKTSKNAHILAVTGEDGYVCLYNTRV--------NFP-----SSSTSAENAEKARK-------------------------CEWLAHDNAVFDLCWIKDDTNLLTACGDHSIKVWDSQERKCLFALTGHTGSVKSISAHPSNHDIIVSGSRDGSFALWDLR-----------------SFKSTRAHPNTFEYYHILRTIKTVQGAH---------------MSSSVKTRGRN---SKAASMSVTSVLYMKDEVSIATAGAVDSVIKFWDTRNLKAPITQA 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10191.314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHZ2_ECTSI7.260e-24798.82Denticleless homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JP24_9PHAE2.380e-24195.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6S5R7_ROSCH1.980e-2027.86Putative transcription factor WD40-like family n=2... [more]
A0A4Y1R8X6_PRUDU4.330e-1925.75Transducin/WD40 repeat-like superfamily protein n=... [more]
M5XBK0_PRUPE6.290e-1825.69Uncharacterized protein n=8 Tax=Prunus TaxID=3754 ... [more]
A0A388LAS4_CHABU6.460e-1827.91Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2C9U7Y3_MANES8.390e-1824.83Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
UPI000870AF941.560e-1725.69denticleless protein homolog n=1 Tax=Pyrus x brets... [more]
A0A0K9RSK0_SPIOL3.840e-1725.52Uncharacterized protein n=1 Tax=Spinacia oleracea ... [more]
A0A251S822_HELAN8.660e-1726.39Putative coatomer beta' subunit (COPB2), WD40 repe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 169..209
e-value: 3.0E-4
score: 30.1
coord: 127..166
e-value: 0.62
score: 18.3
coord: 282..318
e-value: 2.2E-4
score: 30.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 174..209
e-value: 0.066
score: 14.1
coord: 291..318
e-value: 3.9E-4
score: 21.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 176..211
score: 11.444
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 293..320
score: 12.046
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 280..338
e-value: 2.3E-7
score: 32.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 31..259
e-value: 1.2E-19
score: 72.5
NoneNo IPR availablePANTHERPTHR22852LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEINcoord: 130..333
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 134..218
score: 12.526
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 286..327
score: 10.206
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 44..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10191contigEcto-sp8_S_contig10191:68..6940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10191.314.1mRNA_Ecto-sp8_S_contig10191.314.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10191 68..6941 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10191.314.1 ID=prot_Ecto-sp8_S_contig10191.314.1|Name=mRNA_Ecto-sp8_S_contig10191.314.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=342bp
ACRPGSSRRGAPAGRHGHGSRYEMSDYVMGLASPGAFPCPEGSPTYNLQF
SKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRSSGWF
SERAAKRLGAVSAGVKHGYCRSWGVRQPGVVAQYRALANCIFDVEWLHDD
GRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVVLSGA
RDGSFAVWDTRLQQGRPVKKLMNRVVAEEYSAMAWAPANRLQRRMLTPVE
QVFMVHYTEDRDPKIPRSYVRMDETVKGGFDGMVCGRPCASTVTSVQWMP
DGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPPLLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf