prot_Ecto-sp8_S_contig101831.303.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig101831.303.1
Unique Nameprot_Ecto-sp8_S_contig101831.303.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length66
Homology
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BLAST of mRNA_Ecto-sp8_S_contig101831.303.1 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 9.770e-36
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 VSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDK 66
            VSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDK
Sbjct:   11 VSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDK 76
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BLAST of mRNA_Ecto-sp8_S_contig101831.303.1 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.520e-16
Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 0 
Query:    1 VSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDK 66
            ++ + D+QSYA+T+A L+ + P EILLHDG R RVL+ K+V AFH+ ++S  RVLFVSRQYFDQDK
Sbjct:   83 ITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDES--RVLFVSRQYFDQDK 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101831.303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJX0_ECTSI9.770e-36100.00MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A836CNW6_9STRA1.520e-1660.61Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig101831contigEcto-sp8_S_contig101831:335..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig101831.303.1mRNA_Ecto-sp8_S_contig101831.303.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig101831 335..532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig101831.303.1 ID=prot_Ecto-sp8_S_contig101831.303.1|Name=mRNA_Ecto-sp8_S_contig101831.303.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=66bp
VSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKS
CCRVLFVSRQYFDQDK
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