prot_Ecto-sp8_S_contig10183.301.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10183.301.1
Unique Nameprot_Ecto-sp8_S_contig10183.301.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length182
Homology
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: D7G590_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G590_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.710e-119
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0
Query:    1 MARTFALVACLVALIAQASSFMIGPGAGAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            MARTFALVACLVALIAQASSFMIGPG GAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRK VDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV
Sbjct:    1 MARTFALVACLVALIAQASSFMIGPGGGAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKHVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A7S1DX23_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DX23_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.400e-60
Identity = 107/181 (59.12%), Postives = 131/181 (72.38%), Query Frame = 0
Query:    4 TFALVACLVALIAQASSFMIGPGAGAAATIRAQRQGAAVSGFTGCNPVCQRDATT---DRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            T  ++  L  +IA AS++++G              G+A +G+ G   + Q   TT    +S L MMRHRKGFKKL  PADQRKALLR LTT+IIRHGRI TT+VRA+AVRK VDHMITL K G LHARRQAM ++YDK LVHALF++  ERYG+R GGYTR++RT PR+GDNAKMA+IELV
Sbjct:   15 TMRILLLLSVMIAGASAYVVG--------------GSAFTGY-GMATLQQAPPTTISRTKSNLDMMRHRKGFKKLGKPADQRKALLRALTTEIIRHGRIKTTLVRARAVRKHVDHMITLGKRGDLHARRQAMSWVYDKNLVHALFDAAPERYGDRNGGYTRVLRTVPRQGDNAKMAVIELV 180          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A7S3P3S4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3S4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.250e-59
Identity = 96/142 (67.61%), Postives = 112/142 (78.87%), Query Frame = 0
Query:   45 FTGCNPVCQRDATTD-----RSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            F G + +     TTD     RS L MMRHRKGFK L  PADQRKALLR LTT++IRHGRI TT+VRAKAVRK VDH+I L K G LHARRQAM ++YDKQLVHALFE+  +RYG++ GGYTR++RT PR+GDNAKMA+IELV
Sbjct:   25 FLGRSVMTTASTTTDSRTAARSELSMMRHRKGFKTLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHIIELGKRGDLHARRQAMAWVYDKQLVHALFEAAPDRYGDQNGGYTRVLRTVPRQGDNAKMAVIELV 166          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A6V2NXL1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXL1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.870e-58
Identity = 96/145 (66.21%), Postives = 112/145 (77.24%), Query Frame = 0
Query:   42 VSGFTGCNPVCQ-----RDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            +S FTG +   +     R A   RS L MMRHR   KKLN PADQRKALLR LTT++IRHGRI TT+VRAKAVRK VDHMI L K G LHARRQA+G++YDK LVH+LFE+  ERY +R GGYTR++RT PR+GDNAKMA+IELV
Sbjct:   22 LSSFTGTSITLEPTYVVRGAPAGRSDLSMMRHRNKLKKLNKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQALGWVYDKDLVHSLFEAAPERYSDRNGGYTRVLRTMPRQGDNAKMAVIELV 166          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A7S2HZN5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HZN5_9STRA)

HSP 1 Score: 187 bits (476), Expect = 7.800e-58
Identity = 91/128 (71.09%), Postives = 106/128 (82.81%), Query Frame = 0
Query:   54 RDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            R  +  R+ L MMRHRK  KKLN PADQRKALLR LTT++IRHGRI TT+VRAKAVRK VDHMI L K G LHARRQA+G++YDK LVH+LFE+  ERY +R GGYTR++RT PR+GDNAKMA+IELV
Sbjct:   40 RGVSNGRADLSMMRHRKKLKKLNKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQALGWVYDKDLVHSLFEAAPERYSDRNGGYTRVLRTMPRQGDNAKMAVIELV 167          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A7S0CE24_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CE24_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.180e-57
Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
Query:    3 RTFALVACLVALIAQASSFMIGPGAGAAATIRAQRQGAAVSGFTGCNPVCQRDATT---DRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            R FAL++ L +LIA +S+F +G                + S F G     Q    T    R  L MMRHRK   KL  PADQRKALLR LTT++IRHGRI TT++RAKAVRK VDHMITL K+GSLH+RRQA+ ++YDK LVHALF++  +RYG+R GGY R++RT PR+GDNAKMA+IELV
Sbjct:    2 RVFALLSILSSLIASSSAFGVGS--------------MSCSSFAGNTVAVQPSYDTYERSRGDLSMMRHRKKLAKLGKPADQRKALLRALTTEVIRHGRIKTTLIRAKAVRKHVDHMITLGKDGSLHSRRQALAWVYDKNLVHALFDAAPDRYGDREGGYCRVLRTMPRQGDNAKMAVIELV 169          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A1Z5J8C0_FISSO (Large subunit ribosomal protein L17 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8C0_FISSO)

HSP 1 Score: 187 bits (475), Expect = 1.300e-57
Identity = 91/124 (73.39%), Postives = 104/124 (83.87%), Query Frame = 0
Query:   58 TDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            T RS L MMRHRKGFK L  PADQRKALLR LTT++IRHGRI TT+VRAKAVRK VDHMI L K G LHARRQAM ++YDK LVH+LFE+  +RYGE+ GGYTR++RT  R+GDNAKMAI+ELV
Sbjct:   49 TGRSELNMMRHRKGFKTLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIELGKRGDLHARRQAMAWVYDKNLVHSLFEAAPDRYGEQNGGYTRVLRTVARQGDNAKMAILELV 172          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: K0TAZ9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAZ9_THAOC)

HSP 1 Score: 187 bits (474), Expect = 1.280e-56
Identity = 98/145 (67.59%), Postives = 110/145 (75.86%), Query Frame = 0
Query:   42 VSGFTGCN-----PVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            VS FTG +         R   +  S+L MMRHRK   KL  PADQRKALLR LTT+IIRHGRI TT VRAKAVRK VDHM+ L K G LHARRQA+G+IYDK LVHALFE+  ERYGER GGYTR++RT PR+GDNAKMA+IELV
Sbjct:   90 VSSFTGTHISTVMEPAARAHHSKSSSLEMMRHRKRVPKLGKPADQRKALLRALTTEIIRHGRIKTTAVRAKAVRKHVDHMVELGKRGDLHARRQALGWIYDKDLVHALFEAAPERYGERNGGYTRVLRTMPRQGDNAKMAVIELV 234          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A448ZH01_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH01_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.410e-56
Identity = 94/138 (68.12%), Postives = 111/138 (80.43%), Query Frame = 0
Query:   45 FTGCNPVCQRD-ATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            FTG +PVC  + A+   + L M+ HRKGFKKL  PADQRKALLR LTT+ IRHGRI TT+VRA+AVRK VDHMI L K G LHARRQAMG++YDKQLVH+LFE+  +RY +R GGY R++RT  R+GDNAKMAIIELV
Sbjct:   23 FTG-SPVCLSERASAPSTQLSMISHRKGFKKLGKPADQRKALLRALTTETIRHGRIKTTLVRARAVRKHVDHMIELGKRGDLHARRQAMGWMYDKQLVHSLFEAAPDRYADRNGGYCRVLRTVARQGDNAKMAIIELV 159          
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Match: A0A7S4HPH3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPH3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.820e-56
Identity = 105/174 (60.34%), Postives = 126/174 (72.41%), Query Frame = 0
Query:    8 VACLVALIAQASSFMIGPGAGAAATIRAQRQGAAVSGFTGCNPVCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRITTTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAERYGERPGGYTRIIRTTPRKGDNAKMAIIELV 181
            +A   A++A AS+F +G  A +A   ++   GAAVS  T     C   A   R  + MMRHRK   KL  PADQRKALLR LTT++IRHGRI TT+VRAKAVRK VDHMI L K G LHARRQA+G++YDK LVH+LFE+  ERY +R GGYTR++RT PR+GDNAKMAIIELV
Sbjct:    4 LAIFAAMVAGASAFGVGAPAFSA---KSSFAGAAVSEST-----CV--ARETRGDMSMMRHRKKVAKLGKPADQRKALLRALTTEVIRHGRIKTTLVRAKAVRKHVDHMIQLGKRGDLHARRQALGWMYDKDLVHSLFEAAPERYSDREGGYTRVLRTMPRQGDNAKMAIIELV 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10183.301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G590_ECTSI2.710e-11998.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1DX23_9STRA4.400e-6059.12Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A7S3P3S4_9STRA3.250e-5967.61Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6V2NXL1_9STRA1.870e-5866.21Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2HZN5_9STRA7.800e-5871.09Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0CE24_9STRA1.180e-5756.04Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A1Z5J8C0_FISSO1.300e-5773.39Large subunit ribosomal protein L17 n=2 Tax=Fistul... [more]
K0TAZ9_THAOC1.280e-5667.59Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448ZH01_9STRA1.410e-5668.12Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4HPH3_9STRA1.820e-5660.34Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 85..181
e-value: 5.3E-34
score: 117.0
IPR000456Ribosomal protein L17TIGRFAMTIGR00059TIGR00059coord: 72..181
e-value: 3.4E-41
score: 138.0
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 46..181
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 99..121
IPR000456Ribosomal protein L17HAMAPMF_01368Ribosomal_L17coord: 70..181
score: 25.657
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10coord: 66..181
e-value: 5.7E-46
score: 157.6
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 66..181
NoneNo IPR availablePANTHERPTHR14413:SF1850S RIBOSOMAL PROTEIN L17, CHLOROPLASTICcoord: 46..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.876
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10183contigEcto-sp8_S_contig10183:397..3682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10183.301.1mRNA_Ecto-sp8_S_contig10183.301.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10183 397..3682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10183.301.1 ID=prot_Ecto-sp8_S_contig10183.301.1|Name=mRNA_Ecto-sp8_S_contig10183.301.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=182bp
MARTFALVACLVALIAQASSFMIGPGAGAAATIRAQRQGAAVSGFTGCNP
VCQRDATTDRSALRMMRHRKGFKKLNLPADQRKALLRGLTTQIIRHGRIT
TTMVRAKAVRKRVDHMITLSKNGSLHARRQAMGYIYDKQLVHALFESGAE
RYGERPGGYTRIIRTTPRKGDNAKMAIIELV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR036373Ribosomal_L17_sf