prot_Ecto-sp8_S_contig1017.284.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1017.284.1
Unique Nameprot_Ecto-sp8_S_contig1017.284.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length369
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1017.284.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 2.410e-58
Identity = 104/113 (92.04%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:  255 VYIEGIGGNVVMLDSSNDGGTLLLGDSFSDEVEPADYTSVAISPNGTIFYGLNQGTGDLFQHARTPDGDLGSVVCSVATAEPDAYNRLLPSPDGNHIFVADGERLLTFEVRGQ 367
            VYIEG+ GNVVMLDSSN+GGTLLLG+SFSDEVEPADYTSVAISPNGTIFYGLNQ TGDLFQHARTPDGDLGSV+CSVAT EPDAYNRLLPSPDGNHIFVADGERLLTFEV  Q
Sbjct:    9 VYIEGLSGNVVMLDSSNNGGTLLLGNSFSDEVEPADYTSVAISPNGTIFYGLNQATGDLFQHARTPDGDLGSVICSVATGEPDAYNRLLPSPDGNHIFVADGERLLTFEVGDQ 121
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1017.284.1 vs. uniprot
Match: D7FLQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ2_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 3.610e-33
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 0 
Query:  255 VYIEGIGGNVVMLDSSNDGGTLLLGDSFSDEVEPADYTSVAISPNGTIFYGLNQGTGDLFQHARTPDGDL 324
            VYIEG  GNVVML+S NDGGTLLLGDSFSDEVE ADYTSVAISPNGTIFYGLNQ TGDLFQHARTPDGDL
Sbjct:    9 VYIEGWTGNVVMLNSYNDGGTLLLGDSFSDEVEAADYTSVAISPNGTIFYGLNQATGDLFQHARTPDGDL 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1017.284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4X3_ECTSI2.410e-5892.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLQ2_ECTSI3.610e-3391.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 123..368
e-value: 2.3E-10
score: 42.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..368
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.518
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 158..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1017contigEcto-sp8_S_contig1017:5104..10095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1017.284.1mRNA_Ecto-sp8_S_contig1017.284.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1017 5104..10095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1017.284.1 ID=prot_Ecto-sp8_S_contig1017.284.1|Name=mRNA_Ecto-sp8_S_contig1017.284.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=369bp
MMTGTARLLGYRGATALLFTYGWTARLAAAQCTFSNATSSVLTGGNTPYD
RLAITPDGLTLISTSIDEGPDPVYAFRSFNVNPNGQLTLVSEYIYDSQDD
SLYASPVTTSLDGINVYIILPILSKIYSFETSDISSDINQDDIGASADFL
YLGMTSSDTLLVAVDGGEIYRFERKSNGHLQYFDQVSEAAITAATADPTG
DYVVLASSYRVVKVFNVGASVGQDELTGSIQSVSKILTKIFKPSYIAVSP
TSVGVYIEGIGGNVVMLDSSNDGGTLLLGDSFSDEVEPADYTSVAISPNG
TIFYGLNQGTGDLFQHARTPDGDLGSVVCSVATAEPDAYNRLLPSPDGNH
IFVADGERLLTFEVRGQV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf