prot_Ecto-sp8_S_contig10169.281.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10169.281.1
Unique Nameprot_Ecto-sp8_S_contig10169.281.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length224
Homology
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 1.440e-125
Identity = 199/220 (90.45%), Postives = 200/220 (90.91%), Query Frame = 0
Query:    1 MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXX                 A PGHGATA SGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEV+YSQAIQNSSNRRFLLSNC ALVTFTRGRGILLA
Sbjct:    1 MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXXXXXXXXXXXXXXXXXXAAPGHGATAASGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSSNRRFLLSNCEALVTFTRGRGILLA 220          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A1S3XHS6_TOBAC (uncharacterized protein LOC107765292 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3XHS6_TOBAC)

HSP 1 Score: 111 bits (278), Expect = 1.210e-24
Identity = 74/233 (31.76%), Postives = 113/233 (48.50%), Query Frame = 0
Query:    2 FFDLNVPVLRS--------SVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVER------IHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            FFDLN+P   S        +++  R  L  +  E GY  +A N  I G + +  RC++        +   P  AS+V  R          P                          Q +RLTV+++S A A +L +G+  L+SYDVVA  P  Q +FE  C+ S+VD+I++   ++LPF + +    AA+ RG  FE+TYS  I +S  RR ++SN   LV +TRG+ +L +
Sbjct:    3 FFDLNIPYYESDRNITNKTALKATRLKLTIKAMELGYTGIAYNRTIKGVMSESDRCSIPLFPVSSILKLAPSLASSVEFRRKLLNVPVSSPFR------------------------QYTRLTVMVDSSAQASALNSGNPILKSYDVVAVRPLNQLAFEQACQVSEVDIIAIDFSEKLPFRLKQSMVKAAIQRGVYFEITYSSLILDSQMRRQMISNAKLLVDWTRGKNLLFS 211          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A068UKY2_COFCA (Uncharacterized protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068UKY2_COFCA)

HSP 1 Score: 110 bits (275), Expect = 2.950e-24
Identity = 71/233 (30.47%), Postives = 113/233 (48.50%), Query Frame = 0
Query:    2 FFDLNVPVLRS--------SVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFD------PEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            FFDLN+P   S        + + +R  L+ +  E GY  VA N +I G + +  RC+             P  +S+V             P                          Q SRLTVV++ PA A +L +G+  ++SYD+VA  P  Q +FE  C+ S+VD+I++   ++LPF + +    AA+ RG  FE++YS  I ++  RR  +SNC  LV +TRG+ ++++
Sbjct:    3 FFDLNIPYHESDRHVTETTTYKSNRLKLVIKAAELGYTGVAYNRVIKGVMSESDRCSTSLFPLSSLLKHAPSFSSSVKFHRDLLNVPVSTPFR------------------------QYSRLTVVIDCPAQAAALNSGNPVIKSYDIVAVRPINQNAFEQACQTSEVDIIAIDFSEKLPFRLKQSMVKAAVKRGVYFEISYSSLIVDAQVRRQTISNCKLLVDWTRGKNLVIS 211          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A7C9ES22_OPUST (Uncharacterized protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ES22_OPUST)

HSP 1 Score: 106 bits (265), Expect = 1.300e-23
Identity = 68/227 (29.96%), Postives = 117/227 (51.54%), Query Frame = 0
Query:    2 FFDLNVPVL--------RSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            FFDLN+P L        +S+ +++R  L+ +  E GY  +A N  I G + +  RC++      P ++    +       +F    L               G    +   Q +RLTV++E+ A A +L +G+  L+SYD+VA  P  Q  F+  C+ S V++IS+   ++LPF +      AA++RG  FE+TYS  +++   RR L++N   LV +TRG+ ++++
Sbjct:   27 FFDLNIPYLEGDKSIPDKSAKKQNRLRLIIKAMELGYAGIAYNRTIKGAMSESDRCSIPPF---PLSSLLNAAPSLSFAVSFHRRLL---------------GVPPTAPFRQYTRLTVIVETSAQASALNSGNPVLKSYDLVAVRPLNQNCFDHACQSSQVELISINFAEKLPFRLKLPMVKAAIARGVTFEITYSSLMEDVQARRQLIANAKLLVEWTRGKNLIIS 235          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A7S2WPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPG3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.430e-23
Identity = 71/199 (35.68%), Postives = 105/199 (52.76%), Query Frame = 0
Query:   22 LSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            L  L E GY  VA   IIYG+L K   C ++   +  E A+  GS           PS  +    GGG  +             ++RLT+V E P D  S+ +   A ++Y+VVA  P  QR++E+ C+   VDV+SL   +RL F+I +K  DAAL +GA FE+ Y QA+++ S  RFL+S    L   TRG+ ++++
Sbjct:   33 LETLLESGYTTVAATRIIYGKLKKTDGCDIDPRRWMEELAT--GSAQSTTCLPILGPSAAQV---GGGLTL-------------LTRLTLVPEEPDDVPSIQSHKIA-ETYNVVAIQPTSQRTWELACEQHGVDVVSLDCTQRLRFHITRKQVDAALEKGAKFELLYGQAMKDPSAFRFLVSTARQLTHLTRGKHVIMS 212          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A484N9S6_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N9S6_9ASTE)

HSP 1 Score: 107 bits (267), Expect = 3.330e-23
Identity = 74/232 (31.90%), Postives = 110/232 (47.41%), Query Frame = 0
Query:    2 FFDLNVPVLRS--------SVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVER------IHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILL 219
            FFDLN+P L S        S +  R  LL +  E GY  VA N  I G + +  RC++        +   P  +SAV             P                          Q +RLTV+++SPA A  L +G+   +SYDVVA +P  Q +F+  C+ S VDVI++   +++ F + +    AA+ RG  FE+TYS  + ++  RR ++ N   LV +TRGR I+L
Sbjct:    3 FFDLNIPYLESDRLVIDKKSAKSMRLKLLIKAMELGYTGVAYNRTIKGVMSELDRCSIPPFPLSSILKLSPSISSAVKLHRDLLTVPVSAPFR------------------------QYTRLTVMVDSPAQASVLNSGNPITKSYDVVAVMPLNQNAFDQACQISQVDVITIDFSQKMLFRLKQPMVKAAVQRGIYFEITYSSLLTDAQARRQMIPNAKLLVDWTRGRNIIL 210          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: UPI00125DC9EE (uncharacterized protein LOC116003716 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI00125DC9EE)

HSP 1 Score: 107 bits (267), Expect = 3.520e-23
Identity = 71/232 (30.60%), Postives = 111/232 (47.84%), Query Frame = 0
Query:    2 FFDLNVPVLRS--------SVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVER------IHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILL 219
            +FDLN+P   S        +V+  R  L+ +  E GY  VA N  I G + +  RC++        +   P  +SAV             P                          Q +RLTV+++SPA A  L  G+  L+SYD+VA  P  Q +F+  C+ S+VD+I++   ++L F + +    AA+ RG  FE+TYS  + ++  RR ++SN   LV +TRG+ I+L
Sbjct:    3 YFDLNIPYFESDRHVANKNTVKAMRLKLIIKAMELGYTGVAYNRTIKGVMSESDRCSIPLFPLSSILKLAPSISSAVKLHRDLLSVPVSAPFR------------------------QYTRLTVMVDSPAQASVLNVGNPVLKSYDIVAVRPLNQNAFDHACRTSEVDIITIDFSEKLLFRLKQPMVQAAIQRGVYFEITYSSLLIDAQARRQMISNAKLLVDWTRGKNIIL 210          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A834HUK1_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834HUK1_RHOSS)

HSP 1 Score: 105 bits (263), Expect = 1.190e-22
Identity = 75/234 (32.05%), Postives = 116/234 (49.57%), Query Frame = 0
Query:    1 MFFDLNVPVLRSSVE-RDRSA-------LLSQLFEHGYDCVALNTIIYGRLPKQHRCTVER------IHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            +FFDLN+P   S     D+SA       L  +  E GY  VA N  I G + +  RC   +      +   P  +SAV                L     G  A+ P           Q +RLTV ++S A A +L +G+  L++YDVVA  P  Q +FE  CK S+VD+I++   ++LPF + ++    A+  G  FE+TYS+ I ++  RR ++SN   LV +TRG+ ++++
Sbjct:    2 VFFDLNIPYHESDKHVPDKSARKTTRLKLAVKAMELGYTGVAYNRTIKGVMSEHDRCATPKFPLSSVLKLAPSLSSAV---------------KLHRHVLGVPASAPFR---------QYTRLTVAVDSSAQAAALNSGNPILKTYDVVAVKPLSQNAFEQACKASEVDLIAIDFSEKLPFRLKQRLVKDAIEHGVYFEITYSRLIMDAQVRRQMISNAKLLVDWTRGKNLIIS 211          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: UPI000B8B0995 (ribonuclease P protein subunit p30 isoform X1 n=2 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B0995)

HSP 1 Score: 103 bits (256), Expect = 1.410e-22
Identity = 69/232 (29.74%), Postives = 114/232 (49.14%), Query Frame = 0
Query:    3 FDLNVPVL--------RSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVER------IHFDPEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            FDLN+P          +SS ++ R  L+ +  E GY  +A N  I G + +  RCT+        +   P  +S V          F    L               G    S   Q +RLT+++E+ A A +L +G+  L++YD++A  P  Q SF++ C+ S VD+IS+    +LPF +      AA++RG  FE+ YS  +Q+   RR ++SN   LV +T+G+ ++++
Sbjct:    4 FDLNIPYWESDKSVSDKSSKKQTRLKLIVKAIEFGYTGIAYNRTIKGVMSESDRCTISPFSLSSLLKLSPSLSSTV---------CFHRRLL---------------GVPENSAFRQYTRLTMLVETSAQASALNSGNPILKTYDLIAVRPLNQNSFDLACQSSQVDLISIDFADKLPFRLKLPMVKAAIARGVYFEIMYSSLMQDVHVRRQMISNAKLLVEWTQGKNLIVS 211          
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Match: A0A1Q3BTW4_CEPFO (RNase_P_p30 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BTW4_CEPFO)

HSP 1 Score: 105 bits (262), Expect = 1.630e-22
Identity = 71/230 (30.87%), Postives = 109/230 (47.39%), Query Frame = 0
Query:    2 FFDLNVPVLR-----SSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFD------PEAASAVGSRXXXXXXTFREPSLLRATARGGGAAVPGHGATAESGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRFLLSNCGALVTFTRGRGILLA 220
            FFDLN+P L      S+++  R  L ++  E GY  +A N  I G +    RC++  +         P  +S+V             P                          Q +RLTV ++S A AQ L +G+  L++YD+VA  P  Q +F+  C  ++VD+IS+   ++LPF +      AA+ RG  FEV YS  I +   RR ++SN   LV +TRGR ++L+
Sbjct:    3 FFDLNIPYLETTSSSSALKTTRIKLATKAMEFGYTGIAYNRTIKGVMSDHDRCSISLLSLSSLLSLSPSLSSSVNFHRDLLHIPRSSPFR------------------------QYTRLTVCVDSLAQAQVLNSGNPLLKTYDLVAVRPLNQTAFDHACAKAEVDIISINFSEKLPFRLKLPMVKAAIERGVYFEVAYSDLIADVEVRRQMISNAKLLVDWTRGRNLVLS 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10169.281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD2_ECTSI1.440e-12590.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1S3XHS6_TOBAC1.210e-2431.76uncharacterized protein LOC107765292 n=5 Tax=Nicot... [more]
A0A068UKY2_COFCA2.950e-2430.47Uncharacterized protein n=3 Tax=Coffea TaxID=13442... [more]
A0A7C9ES22_OPUST1.300e-2329.96Uncharacterized protein (Fragment) n=2 Tax=Opuntia... [more]
A0A7S2WPG3_9STRA1.430e-2335.68Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A484N9S6_9ASTE3.330e-2331.90Uncharacterized protein n=2 Tax=Cuscuta campestris... [more]
UPI00125DC9EE3.520e-2330.60uncharacterized protein LOC116003716 n=3 Tax=Ipomo... [more]
A0A834HUK1_RHOSS1.190e-2232.05Uncharacterized protein n=2 Tax=Rhododendron TaxID... [more]
UPI000B8B09951.410e-2229.74ribonuclease P protein subunit p30 isoform X1 n=2 ... [more]
A0A1Q3BTW4_CEPFO1.630e-2230.87RNase_P_p30 domain-containing protein n=1 Tax=Ceph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.140coord: 95..220
e-value: 2.9E-17
score: 64.8
IPR002738RNase P subunit p30PFAMPF01876RNase_P_p30coord: 3..219
e-value: 1.1E-27
score: 96.9
IPR002738RNase P subunit p30PANTHERPTHR13031RIBONUCLEASE P SUBUNIT P30coord: 1..219
IPR016195Polymerase/histidinol phosphatase-likeSUPERFAMILY89550PHP domain-likecoord: 21..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10169contigEcto-sp8_S_contig10169:1793..6856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10169.281.1mRNA_Ecto-sp8_S_contig10169.281.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10169 1793..6856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10169.281.1 ID=prot_Ecto-sp8_S_contig10169.281.1|Name=mRNA_Ecto-sp8_S_contig10169.281.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=224bp
MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCT
VERIHFDPEAASAVGSRRRRRRRTFREPSLLRATARGGGAAVPGHGATAE
SGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCK
DSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVTYSQAIQNSSNRRF
LLSNCGALVTFTRGRGILLARYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002738RNase_P_p30
IPR016195Pol/histidinol_Pase-like