prot_Ecto-sp8_S_contig10157.258.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10157.258.1
Unique Nameprot_Ecto-sp8_S_contig10157.258.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length535
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10157.258.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 654 bits (1688), Expect = 7.890e-224
Identity = 437/531 (82.30%), Postives = 445/531 (83.80%), Query Frame = 0 
Query:   17 ARKDFKIYMNKLLEHSTALETFRPDKHHSDVGDTGSGVPAWGPSLGMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSRYREEKHAWPRAGAVTPPRPRPPPNFSWMAEPGSPASRCRRGGGGVSGGG--ARKSLSSADFASSPAPAAGGPRIEGGRLSEDLGMDDGGRSWGAEEEEG--DADAWKAQWSRRLSRGPIHSEYQDRFPWPPRSAFLGTAGDDAFNDAPPAPHPRGRRAPARGGGSDRRQWGSAVARGRGGSEPPRGRA---------AEGYPRDGGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGRLPGGDLDTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEQTSGLEVIGHRTSRASSVYDEKEWEAGRGSEADGGWPSRAADVGGSSVAAGATLVGRAGDVAAAEVWRGEAVGRGEVTMMSGGRTLDFSSQQSILTEYMDEYAWPSTLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARK 534
            ARKDFKIYM+KLLEHSTAL+TFRPDK HSD GDTGSGVPAWGPSLGMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSR+REEKHAWPRAGAVTPPRPRPPPNFSWMAEPGSPASR              ARKSLSSAD ASSPAPAAGGPRI+GGRLS DLGMDDGGRSWGAEEEEG  DADAWKAQWSRRLSRGPIHSEYQDRFPWPPRSAFLGT  DDAFN APP PHPRGRRA ARG G                                 A GYPRDGGGVG XXXXXXXXXXXX                   AGTGRLPGGDL+ AGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SEQTSGLEVIGHRTSRASSVYDEKEWEAGRGSEADGGWPSRAADVGGSS+A GATL+G AGDVAAAEVWRGEAVGRGEVT MSGGRTLDFSSQ SILTEYMDEYAWPS+LPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARK
Sbjct:    3 ARKDFKIYMDKLLEHSTALDTFRPDKRHSDAGDTGSGVPAWGPSLGMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSRFREEKHAWPRAGAVTPPRPRPPPNFSWMAEPGSPASRXXXXXXXXXXXXXXARKSLSSADLASSPAPAAGGPRIKGGRLSADLGMDDGGRSWGAEEEEGEEDADAWKAQWSRRLSRGPIHSEYQDRFPWPPRSAFLGTVDDDAFNGAPPPPHPRGRRASARGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYPRDGGGVGGXXXXXXXXXXXXVDTAAAGRGGEGSPSDGRRAGTGRLPGGDLEMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSEQTSGLEVIGHRTSRASSVYDEKEWEAGRGSEADGGWPSRAADVGGSSMAGGATLIGSAGDVAAAEVWRGEAVGRGEVTTMSGGRTLDFSSQ-SILTEYMDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARK 532
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10157.258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI7.890e-22482.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10157contigEcto-sp8_S_contig10157:439..5716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10157.258.1mRNA_Ecto-sp8_S_contig10157.258.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10157 439..5716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10157.258.1 ID=prot_Ecto-sp8_S_contig10157.258.1|Name=mRNA_Ecto-sp8_S_contig10157.258.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=535bp
MLSGRAGCSQPHAIEQARKDFKIYMNKLLEHSTALETFRPDKHHSDVGDT
GSGVPAWGPSLGMSEEGGSVGEARGSPPAGAAVDVTMPPFSPSRYREEKH
AWPRAGAVTPPRPRPPPNFSWMAEPGSPASRCRRGGGGVSGGGARKSLSS
ADFASSPAPAAGGPRIEGGRLSEDLGMDDGGRSWGAEEEEGDADAWKAQW
SRRLSRGPIHSEYQDRFPWPPRSAFLGTAGDDAFNDAPPAPHPRGRRAPA
RGGGSDRRQWGSAVARGRGGSEPPRGRAAEGYPRDGGGVGGEERRRRRPS
SSSVDTAAAGRGGEGSPGGGRRAGTGRLPGGDLDTAGGSGGRGGGGGGGG
ESGGGAAAVAPFVAGKRGDDRKEGARQQAWRRGGSAVGSPPPSEQTSGLE
VIGHRTSRASSVYDEKEWEAGRGSEADGGWPSRAADVGGSSVAAGATLVG
RAGDVAAAEVWRGEAVGRGEVTMMSGGRTLDFSSQQSILTEYMDEYAWPS
TLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARK*
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