prot_Ecto-sp8_S_contig101566.255.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig101566.255.1
Unique Nameprot_Ecto-sp8_S_contig101566.255.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp8_S_contig101566.255.1 vs. uniprot
Match: D7G8H7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H7_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.420e-65
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MGSSLGVLAAYSAGEGTQPLRQLVYLLLLSVGAAAVTTAACSWLAGDAVQNGGSVGIMVLAIVASLGSTAVFTIDKHNMLLTRAATTAAFDDRERHEGLPHLHEESLMDLKAV 113
            MGSSLGVLAAYSAGEGTQPLRQL+YLLLLSVGAAAVTTAACSWL GD +QNGGSVGIMVLA VASLGSTAVFTIDKHNMLLTRAAT AAFDDRERHEGLPHL EESLMDLKAV
Sbjct:   52 MGSSLGVLAAYSAGEGTQPLRQLLYLLLLSVGAAAVTTAACSWLTGDVLQNGGSVGIMVLATVASLGSTAVFTIDKHNMLLTRAATAAAFDDRERHEGLPHLQEESLMDLKAV 164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101566.255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8H7_ECTSI1.420e-6593.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig101566contigEcto-sp8_S_contig101566:5..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig101566.255.1mRNA_Ecto-sp8_S_contig101566.255.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig101566 5..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig101566.255.1 ID=prot_Ecto-sp8_S_contig101566.255.1|Name=mRNA_Ecto-sp8_S_contig101566.255.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=114bp
MGSSLGVLAAYSAGEGTQPLRQLVYLLLLSVGAAAVTTAACSWLAGDAVQ
NGGSVGIMVLAIVASLGSTAVFTIDKHNMLLTRAATTAAFDDRERHEGLP
HLHEESLMDLKAV*
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