mRNA_Ecto-sp8_S_contig9976.31855.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: D8LR41_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR41_ECTSI) HSP 1 Score: 548 bits (1411), Expect = 4.630e-193 Identity = 284/298 (95.30%), Postives = 288/298 (96.64%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGADAQHGYRRVELPDIVRKVLSQVEGLVAKAADERDPPSVVSSNSGRKSKRKRPET 882
VHTTGGVASLVMMILIGPRLGRFSGGMS +TTE+S TLGAF+LWVGWYGFNGCS LYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWG+IAAGLF SQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFM GFSLKYVGLLRISE SERFGADAQHGYRRVELPDIVRKVLSQVEGLVAKAADERDPPS VSSNSGRKSKRKRPET
Sbjct: 206 VHTTGGVASLVMMILIGPRLGRFSGGMSIQTTEESVIIQTLGAFLLWVGWYGFNGCSALYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGVIAAGLFASQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMAGFSLKYVGLLRISEESERFGADAQHGYRRVELPDIVRKVLSQVEGLVAKAADERDPPSFVSSNSGRKSKRKRPET 503
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A6H5L0R3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R3_9PHAE) HSP 1 Score: 358 bits (919), Expect = 4.840e-118 Identity = 184/275 (66.91%), Postives = 219/275 (79.64%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFS-GGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGAD-AQHGYRRVELPDIVRKVLSQVEGLVAKA 807
VH TGG+A+LVM++LIGPRLGRFS GG K QS TLGAF+LWVGWYGFNGCSTLYITG+SHVAAKAMVCT+I A SA LGV ASL+LFQHV P V+NG+LSGLVAI+A CAVVEVEGAF IG ++A+ YLGCSR +++VRIDDMVDA+PVHLANGVWG+IAAGLF SQEGYSASYY++R CCG LYGCG Q++AN+ FVLS+L WVGL T +KY+G+LRIS V ER G D A HG ++P+ + +LS++E L AKA
Sbjct: 217 VHATGGMAALVMVVLIGPRLGRFSDGGAKNKMERQSVIIETLGAFILWVGWYGFNGCSTLYITGNSHVAAKAMVCTSIAAASAALGVACASLILFQHVGPGQVINGLLSGLVAITAGCAVVEVEGAFLIGTIAALNYLGCSRLLELVRIDDMVDASPVHLANGVWGVIAAGLFASQEGYSASYYSERGSMCCGLLYGCGPRQLMANMVFVLSVLVWVGLTTLAISHGVKYMGILRISNVVERMGTDSAAHGGS--DMPEFAKNLLSRIEALAAKA 489
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: D8LR44_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR44_ECTSI) HSP 1 Score: 332 bits (851), Expect = 2.560e-108 Identity = 168/236 (71.19%), Postives = 193/236 (81.78%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFS-GGMSTKTTEQST----LGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRI 693
VHTTGG+A+LVM++L+GPRLGRFS GG K QS LGAF+LWVGWYGFNGCSTLYITGSSHVAAKAMVCT+I A SA LGV SL+LFQHV P V+NG+LSGLVAISA CAVVEVEGAF IG ++A+ YLGCSR +++VRIDDMVDA+PVHLANGVWGMIAAGLF S+EGYSASYY++R CCG LYGCG Q++AN FVLSIL WVGL T +KY+G+LRI
Sbjct: 203 VHTTGGMAALVMVVLVGPRLGRFSDGGAKNKMERQSVIIEALGAFILWVGWYGFNGCSTLYITGSSHVAAKAMVCTSIAAASASLGVACTSLILFQHVGPGQVINGLLSGLVAISAGCAVVEVEGAFLIGTIAALNYLGCSRLLELVRIDDMVDASPVHLANGVWGMIAAGLFASKEGYSASYYSERGRMCCGLLYGCGPRQLMANTVFVLSILVWVGLTTLAISRGVKYMGILRI 438
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A7S1UFZ4_9STRA (Ammonium transporter n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFZ4_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.570e-59 Identity = 117/251 (46.61%), Postives = 159/251 (63.35%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFS-GGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGADA-QHG 735
VH TGGVA+L I GPR GRF G EQ+ LG F+LWVGWYGFNG STLYIT S VAAK MV +TI A +AG + V+ +NG+L GLV+I+ +CAV+E GAF IGL+ V+Y + ++ ++IDD V+AAPVH+ G+WG+IAAGLF +++ YS +YY+DR+E C G YG + + AN+ F++ I+ WVG T + SLK GLLR+++ + G D +HG
Sbjct: 210 VHMTGGVAALSGAIWAGPRNGRFGPNGEVNSLPEQNPIFAALGTFILWVGWYGFNGASTLYITHYSGVAAKVMVVSTIGAAAAGFSSVIFHKFMHNTVDLGAALNGVLGGLVSITGACAVIEPYGAFIIGLIGGVVYQLSAMLLESLKIDDCVNAAPVHMFCGMWGVIAAGLFATEQNYSNAYYSDRAEDCAGIFYGGNGSTLGANICFMICIILWVGATTSVMFGSLKAAGLLRLTDEQQATGMDILEHG 460
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A835ZI90_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI90_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.470e-58 Identity = 110/251 (43.82%), Postives = 149/251 (59.36%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQ-----STLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGADA-QHG 735
VH TGGVA+LV +++GPR GRF + Q +G LW GWYGFNG STL ITG VAAK M+ +T+ GL T +L++ +++P NGILSG VAI+ VV+ EGA IG ++ +IY G S + +RIDD+V+AAPVHL G+WGM A GL + Y +YY DR++ CCG YGCG Q+ A + F+L L W G+ + + KY LR+S+ E G D+ +HG
Sbjct: 213 VHMTGGVAALVGAVMVGPRAGRFGPSGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSTLLITGKGLVAAKVMINSTLSGAIGGLSSTLVALLMNGYIDPAAANNGILSGFVAITGPSGVVQPEGALLIGFIAGLIYQGASNLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEEHNYGRAYYEDRADICCGAFYGCGGNQLAAQIVFILVNLAWTGVTSAIMFTVAKYTVGLRVSKEVEEMGMDSSKHG 463
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.130e-57 Identity = 117/253 (46.25%), Postives = 158/253 (62.45%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLG-VTSASLVLFQ--HVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGAD-AQHG 735
VH TGG A+LV +L+GPR GRF G+ + + S TLG LW+GWYGFNG STL I G VAA+AMV TTI + G+ VTS ++ F+ +V+ NG+L GLVAI+A C+VV EGA IG V+ +Y S + ++IDD+VDA+PVH+ G+WG++AAGL ++ Y SYY++R CCG YGCG Q ANL FV+ +L W G +F+ KY LR+S+ E G D ++HG
Sbjct: 201 VHMTGGTAALVGAVLLGPRSGRFIDGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVGLGEVAARAMVNTTI---AGGVACVTSVTVAYFRIGYVDITAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLAEKDNYGESYYSERQGDCCGAFYGCGGNQFTANLIFVIVVLGWAGFCSFLMFTFAKYTVGLRVSKAIEDAGMDDSKHG 450
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 198 bits (504), Expect = 1.060e-56 Identity = 117/255 (45.88%), Postives = 159/255 (62.35%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQH---VEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWV---GLMTFMTGFSLKYVGLLRISEVSERFGADAQHG 735
VHTTGGV +L ++GPR GRF G + E S TLG +LW GWYGFNG STLYI G S AA+AMV +TI SAG G S+ L+ H ++P NGIL GLV+I+ASC+VV+ EGAF IGL+ VIY + + ++IDD+V+A+PVH+ GVWG++A+GLF S+ Y A+YY+ R +C G YG +Q ANL+F+L++L W G + F + ++GL EV E ++HG
Sbjct: 203 VHTTGGVVALWGAKILGPRTGRFINGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAPAARAMVTSTI---SAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASEAPYGAAYYSARQSKCAGAFYGGDGSQFAANLAFILAVLAWSTTWGCIIFFACDKIPFIGLRVDLEVEEMGMDSSKHG 454
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.450e-56 Identity = 110/251 (43.82%), Postives = 145/251 (57.77%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQ-----STLGAFMLWVGWYGFNGCSTLYITGSSHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGAD-AQHG 735
VH TGGVA+LV +++GPR GRF + Q +G LW GWYGFNG S+LYI G VAAK M+ +T+ GL T + VL ++P NGILSG VAI+A V + EGA IG ++ +IY S+ + +RIDD+V+AAPVHL G+WGM A GL Y YY DRS CCG YGCG +Q+ A + F+L L W G+ + + KY LR+S+ E G D ++HG
Sbjct: 208 VHMTGGVAALVGAVMVGPRFGRFGPNGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSSLYIVGKGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLFCGMWGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHG 458
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 192 bits (489), Expect = 5.340e-53 Identity = 119/288 (41.32%), Postives = 174/288 (60.42%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGS-SHVAAKAMVCTTICATSAGLGVTSASLVLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYA---DRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGADAQ----------------HGYRRVELPDIVRKVLSQVEG 792
VH GG+A+LV I + PR RF G + + +QS TLG +LWVGWY FN ST+ I+G S VAA+A+V TTI ++ L + A +L + + + V NGILSGLVA+++ +V+ EGAF +G+VSA +Y + + ++IDD+VDAAPVH+ G+WGMI GLFT++EG++ +Y A DR+++CCG YGCG + ANL+ + +IL WVGL + + F+++ LR+ E E G D +G R L D V + L+QV+G
Sbjct: 208 VHMVGGIAALVAAIAVKPRKSRFRHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVMGVVSAFLYYASANLLLKLKIDDVVDAAPVHMFCGMWGMIGTGLFTTREGWALTYGAAGGDRADECCGVFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPEDQELLGMDLTRHNSTSGSFNAGGQGGNGGRNGSL-DAVHRALAQVDG 494
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI) HSP 1 Score: 189 bits (479), Expect = 8.510e-52 Identity = 112/250 (44.80%), Postives = 161/250 (64.40%), Query Frame = 1
Query: 1 VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQS----TLGAFMLWVGWYGFNGCSTLYITGS-SHVAAKAMVCTTICATSAGLGVTSASL-VLFQHVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAAPVHLANGVWGMIAAGLFTSQEGYSASYYA---DRSEQCCGWLYGCGTAQILANLSFVLSILCWVGLMTFMTGFSLKYVGLLRISEVSERFGAD 723
VH GGVA+LV I + PR RF G + + +QS TLG +LWVGWY FN ST+ I+G S VAA+A+V TTI SAG+ V S+ +L + + + V NGILSGLVA+++ +V+ EGAF IG++SA Y + + ++IDD+VDAAPVH+ G+WG+I GLFT++EG++ +Y A DR+++CCG YGCG + ANL+ + +IL WVGL + + F+++ LR+ E G D
Sbjct: 157 VHMVGGVAALVAAIAVKPRKSRFRHGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTI-GPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFFYYASANLLLKLKIDDVVDAAPVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCGLFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMD 405 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9976.31855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9976.31855.1 >prot_Ecto-sp8_S_contig9976.31855.1 ID=prot_Ecto-sp8_S_contig9976.31855.1|Name=mRNA_Ecto-sp8_S_contig9976.31855.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=295bp VHTTGGVASLVMMILIGPRLGRFSGGMSTKTTEQSTLGAFMLWVGWYGFNback to top mRNA from alignment at Ecto-sp8_S_contig9976:41..5607+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9976.31855.1 ID=mRNA_Ecto-sp8_S_contig9976.31855.1|Name=mRNA_Ecto-sp8_S_contig9976.31855.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5567bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9976:41..5607+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9976:41..5607+ >mRNA_Ecto-sp8_S_contig9976.31855.1 ID=mRNA_Ecto-sp8_S_contig9976.31855.1|Name=mRNA_Ecto-sp8_S_contig9976.31855.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9976:41..5607+ (Ectocarpus species8 EcLAC_412)back to top |