mRNA_Ecto-sp8_S_contig9934.31797.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9934.31797.1
Unique NamemRNA_Ecto-sp8_S_contig9934.31797.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A6H5JJU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU3_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 3.560e-143
Identity = 198/208 (95.19%), Postives = 202/208 (97.12%), Query Frame = 2 
Query:    2 YAIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            YAIRSMPNPLEFFG+IYCFSSILAGPAFEYKEY NATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVG+GYFPLTGMRSS VAGM IPKRI+NAWITLFFVRMKYFFAWKTADGASVL GFGFQGYGPDGQV GWDGVSNIDIM FETSCNVATNTRAWNKRTQGWLERYVYMRTG+SLTATYFVSAFWHGFYPGYYLFFM
Sbjct:  207 YAIRSMPNPLEFFGYIYCFSSILAGPAFEYKEYANATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGNGYFPLTGMRSSEVAGMPIPKRIMNAWITLFFVRMKYFFAWKTADGASVLGGFGFQGYGPDGQVVGWDGVSNIDIMTFETSCNVATNTRAWNKRTQGWLERYVYMRTGNSLTATYFVSAFWHGFYPGYYLFFM 414
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: D7FYX9_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.210e-94
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 2 
Query:    2 YAIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDG 433
            YAIRSMPNPLEFFG+IYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSS VAGM IPKRI+NAWITLFFVRMKYFFAWKTADGASVL GFGFQGYGPDGQV GWDG
Sbjct:  190 YAIRSMPNPLEFFGYIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSEVAGMPIPKRIMNAWITLFFVRMKYFFAWKTADGASVLGGFGFQGYGPDGQVVGWDG 333
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A8K1CGW1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGW1_PYTOL)

HSP 1 Score: 228 bits (581), Expect = 3.190e-69
Identity = 113/208 (54.33%), Postives = 153/208 (73.56%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLF-QVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI  +P+ LEFFG++Y FS+ LAGPAFE +EY + T+GK +  DGK   +PS+  AA SK   G +C+ LF QVG  Y PL+ +    VA + + ++++  +ITL F + KY+ AWK A+G++VLAGFGF+GY  +G+  GW+GVSN+DI+ FE + ++   +RAWNK TQ WLERYVY RTG+SL ATYFVSAFWHGFYPGYY+FF+
Sbjct:  189 AITELPSLLEFFGYVYSFSTFLAGPAFEIREYLDVTTGKKFIHDGKSK-VPSSVLAAFSKLLVGSVCMGLFAQVGPQY-PLSNLHDPKVAALPVGQQVLTLYITLIFCKAKYYSAWKIAEGSTVLAGFGFEGYTAEGKSRGWNGVSNMDIVGFEFAQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFVSAFWHGFYPGYYIFFL 394
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A2P4X757_9STRA (Lysophospholipid acyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X757_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.500e-69
Identity = 113/207 (54.59%), Postives = 147/207 (71.01%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI+ +P+ LEFFG++Y F++ LAGPAFE +EY + TSGK +  DGK +  PS+  AA SKF  G L +  F V    +PL+ +    VA   +  +I + +ITL F + KY+ AWK A+GA+VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  246 AIQEIPSLLEFFGYVYSFTTFLAGPAFEIREYLDVTSGKKFLVDGK-YKQPSSVLAAFSKFLVGSLLMAAFAVYGPVYPLSNLHDPKVAAQPLFYQIKDLYITLIFCKAKYYSAWKIAEGATVLCGFGFEGFNKDGSSRGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 451
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: M4B542_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B542_HYAAE)

HSP 1 Score: 224 bits (570), Expect = 4.190e-69
Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI  +P+ LEFFG++Y F++ LAGPAFE +EY + TSGK +  DG+ +  PS+  AA SKF  G L + +F V    +PL+ +    VA   +  +I + +ITL F + KY+ AWK A+GA+VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYYLFFM
Sbjct:   56 AIYEIPSLLEFFGYVYSFTTFLAGPAFEIREYLDVTSGKKFLLDGQ-YRQPSSVLAAFSKFLVGSLLMAVFAVYGPMYPLSNLHDPKVAAQPLLFQIRDLYITLMFCKAKYYSAWKIAEGATVLCGFGFEGFEKDGCGRGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 261
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A3M6VA33_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA33_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.290e-68
Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI+ +P+ LEFFG++Y F++ LAGPAFE +EY + T+GK +  +GK +  PS+  AA SKF  G L +  F V    +PL+ +    VA + I  +I   +ITL F + KY+ AWK A+GA+VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYYLFFM
Sbjct:  191 AIQEIPSLLEFFGYVYSFTTFLAGPAFEIREYLDVTTGKKFLLNGK-NKQPSSVLAAFSKFLVGSLLMAAFAVYGPMYPLSNLHDPKVANLPILLQIWKLYITLIFCKAKYYSAWKIAEGATVLCGFGFEGFSKDGSSLGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFM 396
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: D0MV88_PHYIT (Lysophospholipid acyltransferase, putative n=15 Tax=Phytophthora TaxID=4783 RepID=D0MV88_PHYIT)

HSP 1 Score: 224 bits (572), Expect = 2.980e-68
Identity = 110/207 (53.14%), Postives = 146/207 (70.53%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI+ +P+ LEFFG++Y F++ LAGPAFE +EY + TSGK +  DGK +  PS+  AA SKF  G L +  F V    +PL+ +    +A   +  +I + +I L F + KY+ AWK A+GA+VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYY+FFM
Sbjct:  191 AIQEIPSLLEFFGYVYSFTTFLAGPAFEIREYLDVTSGKKFLMDGK-NKEPSSVLAAFSKFLVGSLLMAAFAVYGPMYPLSNLHDPKIAAQPLLYQIRDLYIALIFCKAKYYSAWKIAEGATVLCGFGFEGFNKDGTSRGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYIFFM 396
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BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A662XBI7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBI7_9STRA)

HSP 1 Score: 217 bits (553), Expect = 3.920e-67
Identity = 105/207 (50.72%), Postives = 145/207 (70.05%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI  +P+ +EFFG++Y F++ LAGPAFE +EY + TSGK +  +GK    PS+  AA SKF  G + +  F      +PL+ +    +A + +  ++ + +ITL F + KY+ AWK A+GA+VL+GFGF+G+  DG   GW+GVSN+DI+ FE + ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYY FFM
Sbjct:    1 AISEIPSLVEFFGYVYSFTTFLAGPAFEIREYLDVTSGKKFLLNGKSK-QPSSVLAAFSKFLVGSVLMAAFAAFGPQYPLSNLHDPKIAALPLLWQLKDLYITLIFCKAKYYSAWKIAEGATVLSGFGFEGFNADGTSRGWNGVSNMDILGFEFAQSMRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYFFFM 206
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A484DYF4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYF4_BRELC)

HSP 1 Score: 220 bits (561), Expect = 3.130e-66
Identity = 105/207 (50.72%), Postives = 145/207 (70.05%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI  +P PLEFFG++Y F++ LAGPAFE +EY + TSG+ ++ +GK    PS+  AA SK   G   +  F + +  +PL+ +    +A + +  ++   +ITL F ++KY+ AWK A+G++VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYY FFM
Sbjct:  191 AIYEIPTPLEFFGYVYSFTTFLAGPAFEIREYLDVTSGRKFQLNGKMK-QPSSVLAAFSKLVVGSCLMAAFAMYAPMYPLSNLHDPQIAALPLFAQMRELYITLIFCKVKYYSAWKVAEGSTVLCGFGFEGFHEDGTSRGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLVATYFISAFWHGFYPGYYFFFM 396
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Match: A0A3R7G029_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G029_9STRA)

HSP 1 Score: 219 bits (559), Expect = 6.210e-66
Identity = 107/207 (51.69%), Postives = 145/207 (70.05%), Query Frame = 2 
Query:    5 AIRSMPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNWAAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITLFFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFETSCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYLFFM 625
            AI  +P+ LEF+G+++ F++ LAGPAFE +EY + TSGK +  +GK    PS+  AA SKF  G + +  F +    FPL+ +    VA + +  ++   +ITL F + KY+ AWK A+GA+VL GFGF+G+  DG   GW+GVSN+DI+ FE S ++   +RAWNK TQ WLERYVY RTG+SL ATYF+SAFWHGFYPGYYLFF+
Sbjct:  191 AIDKIPSLLEFYGYVFSFTTFLAGPAFEIREYLDVTSGKKFLLNGKSK-QPSSVLAAFSKFLVGSVLMAAFAIYGPMFPLSNLYDPKVAALPLVWQLKELYITLIFCKTKYYSAWKIAEGATVLCGFGFEGFNEDGSSRGWNGVSNMDILGFEFSQSIRAASRAWNKGTQNWLERYVYTRTGNSLMATYFISAFWHGFYPGYYLFFL 396
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9934.31797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJU3_9PHAE3.560e-14395.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYX9_ECTSI1.210e-9495.83Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A8K1CGW1_PYTOL3.190e-6954.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4X757_9STRA3.500e-6954.59Lysophospholipid acyltransferase (Fragment) n=1 Ta... [more]
M4B542_HYAAE4.190e-6954.11Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VA33_9STRA1.290e-6854.11Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
D0MV88_PHYIT2.980e-6853.14Lysophospholipid acyltransferase, putative n=15 Ta... [more]
A0A662XBI7_9STRA3.920e-6750.72Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A484DYF4_BRELC3.130e-6650.72Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3R7G029_9STRA6.210e-6651.69Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9934contigEcto-sp8_S_contig9934:1489..5491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score284.6
Seed ortholog evalue3.5e-74
Seed eggNOG ortholog2880.D7FYX9
Preferred nameMBOAT1
Model size628
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K13146,ko:K13517,ko:K13519
KEGG ReactionR01318,R02241,R03437,R04480,R09034,R09035,R09036,R09381
KEGG Pathwayko00561,ko00564,ko00565,ko01100,ko01110,map00561,map00564,map00565,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006575,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006658,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0007009,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0008150,GO:0008152,GO:0008354,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009987,GO:0010256,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016411,GO:0016477,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030258,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0036150,GO:0036151,GO:0036152,GO:0040011,GO:0042171,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046486,GO:0047144,GO:0047184,GO:0048232,GO:0048468,GO:0048515,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0061024,GO:0071617,GO:0071704,GO:0071840,GO:0090407,GO:0097164,GO:0098827,GO:1901564,GO:1901576
Exons6
EggNOG free text desc.protein octanoylation
EggNOG OGsCOG5202@1,KOG2704@2759
EC2.3.1.23,2.3.1.51
Cds size612
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9934.31797.1prot_Ecto-sp8_S_contig9934.31797.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9934 1489..5475 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145363.2768304-CDS-Ecto-sp8_S_contig9934:1488..15681681145363.2768304-CDS-Ecto-sp8_S_contig9934:1488..1568Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 1489..1568 -
1681145363.2973893-CDS-Ecto-sp8_S_contig9934:2130..22451681145363.2973893-CDS-Ecto-sp8_S_contig9934:2130..2245Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 2131..2245 -
1681145363.3081274-CDS-Ecto-sp8_S_contig9934:2865..29461681145363.3081274-CDS-Ecto-sp8_S_contig9934:2865..2946Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 2866..2946 -
1681145363.318547-CDS-Ecto-sp8_S_contig9934:3426..35311681145363.318547-CDS-Ecto-sp8_S_contig9934:3426..3531Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 3427..3531 -
1681145363.3292036-CDS-Ecto-sp8_S_contig9934:4402..45161681145363.3292036-CDS-Ecto-sp8_S_contig9934:4402..4516Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 4403..4516 -
1681145363.3404472-CDS-Ecto-sp8_S_contig9934:5358..54751681145363.3404472-CDS-Ecto-sp8_S_contig9934:5358..5475Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9934 5359..5475 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145363.3521473-UTR-Ecto-sp8_S_contig9934:5475..54911681145363.3521473-UTR-Ecto-sp8_S_contig9934:5475..5491Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9934 5476..5491 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9934.31797.1

>prot_Ecto-sp8_S_contig9934.31797.1 ID=prot_Ecto-sp8_S_contig9934.31797.1|Name=mRNA_Ecto-sp8_S_contig9934.31797.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=204bp
MPNPLEFFGFIYCFSSILAGPAFEYKEYDNATSGKAYEKDGKPHPMPSNW
AAALSKFGSGMLCLTLFQVGSGYFPLTGMRSSAVAGMAIPKRIVNAWITL
FFVRMKYFFAWKTADGASVLAGFGFQGYGPDGQVAGWDGVSNIDIMAFET
SCNVATNTRAWNKRTQGWLERYVYMRTGSSLTATYFVSAFWHGFYPGYYL
FFM*
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mRNA from alignment at Ecto-sp8_S_contig9934:1489..5491-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9934.31797.1 ID=mRNA_Ecto-sp8_S_contig9934.31797.1|Name=mRNA_Ecto-sp8_S_contig9934.31797.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4003bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9934:1489..5491- (Ectocarpus species8 EcLAC_412)
TTACGCGATCCGCTCCATGCCCAATCCGCTCGAGTTCTTCGGCTTCATCT
ACTGCTTCTCGTCCATCCTCGCCGGCCCGGCGTTCGAGTACAAGGAGTAC
GACAACGCCACCAGCGGCAAGGCTTACGAGAAGGTGGGGATGGGGGTGGG
ACTTCGTTTGGGGTTCCGGAGGAAGAAAAGGAGGAGGCATGCGTTCCGAC
GGCCCGGGGGCGTATAGGCTGTTCCTGGTACCTTTTGTTGACGTTGTTTT
ACGGAACGTCTTATGGGTAGACACCGTTGCGGGATAGATACAATGACAGG
GAGGTACGAGTGAGAGAGCAACGAGACAGACAGACAGACAGAAAGGGGGG
GGGGGTGTACTCATAGTCGTGCATGCCGTACTCGTTTGACCATTTTCAAG
CGCGCGTGCGGGGGGGTTTCAATACCATGCAGTTGTTGAAGGTTGCGCCT
GCACAATGTGGTTCTGACCCCGGAAGGACTTGGCGGGAAGGGTGCACGGA
CGAGTGCTCCGTCATATGCGTATGCCAAGACACGAATGTATCACGCAGCT
TGCTTGTTCAGAAACGTTTTCAGGGACACAACCTGCGGGGGGGGTGATCG
GTGACGTAGGCGATTGATCACGATTTTCACGCACGCACTCGCGCGCAGTT
AATCTTCCTGCACAAGAAGCTTATCCTTGGTGCTCTCTTTGCTGCTGGGT
TTTGCGGTGATCGCTTTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CCCCTCCCCCTCTCTCTCTCTCCCGGCTCTCTCTGTCTGCCCGTCCCGCT
TCCGTCTCTGTGCCTACCTCTCTGTGCCTACCTCTCTGTGCCTACCTCTT
TGTGTCTGCCTCTTTGTGTCTATCTGTCTTCCTGCCTCTTTTCTTGGCGC
GAATGCGTGGTGTGTGTGGGGATGGGGTACCTTAATTCCTTTTCGGCGCC
TTGTGGGTGGGTCGGGAACAAACAGGACGGCAAGCCGCACCCGATGCCCT
CCAACTGGGCGGCCGCTCTGTCCAAGTTCGGGTCGGGCATGCTCTGCCTC
ACTCTCTTCCAGGTCGGCAGCGGCTACTTTCCGCTCACGGTAAGTGCAAC
TGCATACCACGGTCGCAGTGTGGAATATTCGGTCGTAGTAGCGGCTACAA
ACCCTCACGGCAACGTACCGCGGTCGTAGTAACGGCTACTTTCCGTCCGC
GGTTAGTCCAGCAACACACCACGGTCGTATTGTGCGGAATGTACGGTCGT
AGTAGCGGCTATTTTCCGCTCGCGGTAAGTACAACCAACTAAGCAACATA
CCGCGGTCGTAGTAGCGGCTACTCTCCGCTCGCGGTATGCGCAGCAGTTG
GAGGCGGAAAGATGGCACGCCCCCTAGACCGATTTTCAAAGCTTGGTTGC
TCCACAACCATGATTGTCTGTACCGTACCGTATACCGTACCGTGGTATTC
CGTAGGAGGCGGAGAGATGGCACGCCCCCTAGACCGATTTTCAAAGCGCG
GTTGCTCCACAAACCAAGATTGTGCCAACGCCAACAAACGTGGTTTCGGA
AGCATCTCGTCGAGGGCTTTCCGTAGACGCATCGGGGTCTTTTTCGCACC
CGCTTGGTTGTGGCGCCGTCGAGGTTTGCAAGTCGGCTGGGGTGGGGTCG
TAGTGGTGGTAATAGCTTCGGCTTGGTTCTTGCTTCCATCCTGCATACTC
TGCTACTGCTGTACAAGATCATCGTGACCACGGTGTTGCTCACGTTTGTA
TTTTTTTTTTTTTTGCCATTTTCGTCTGCTCCCGCAGACGCTTGCGAAAG
GGTAACTTGTGCCTATATAGGTGTCCACACGCATGATCTCTGTTGCTAAC
TCGGAGTACTATTTTTTTTTCTCACTTAACAACACAACAAAAGTCGTCTC
TTCCACAGAGCCTGGGATAGTTTCGTTTTTTTTAACGTCTTTTTTGCGTG
TGTGTTGCAGGGAATGCGATCGTCGGCGGTGGCAGGTATGGCTATCCCCA
AGCGGATCGTGAACGCGTGGATCACCCTCTTCTTCGTGCGGATGAAGTAC
TTCTTCGCCTGGAAGGTAATACCGCTGTACACGCATCTGCCATATCTATC
TGTCCTGCATGTATGTGACACCGGTCTTCATGGGGACATTTTTATTTTTT
TTGAGGGGGGTTAAAATCTTTATCTTGGCCAAGATTCGATCCACCAGAGG
ATGGTGTTTTCACTGTTTACTACCCAAGCAAATCTTCTTTCAGAGGTAGG
GCCAAGACTTTGCAAAGGGCCGGCGCTATTTTTTTCGTGCCTTTTCTTTT
GGGATGTGGAGGGTAAACAGCACGGCAGCCGTGCCGTACCGTGCGTGGTA
GCGGGGATCCTGCTTTCGGCTCTCCGTGGTGAGGTGCTTACACGCTGCCA
GCTCTCTTTTTCGCTGATGGTTGATCTTGTTGTTCCTGGCCGCCTGCCTG
GCTGACTCATGCTGCCTGGACCCACCCGCCTTTCTTGTCGCGACGAAATA
AATGCCTTGACTTTGCGTGGCGTGGTGCCGCTTGGTCTTTTTAAGACCGC
CGACGGGGCTTCCGTGCTTGCAGGCTTTGGATTCCAGGGCTACGGGCCTG
ACGGACAAGTCGCCGGCTGGGACGGGGTGAGATGAGAGGCTTGCGCCGAA
ATGATTTTTAAATGTGCAGTACTTTTTTTGAAGTTTTTGGGACAGGGTGA
GATAGATGAGAGAAGCTTCCACGAGTATGAATTGAAGCACGAAGTATTTT
CGAATTTAGGGCTCGGGGTTAGATGAGAGGAGCAGTAGCGTTCGCTGGGG
TTTCGTCTAGGCAAATATGTTGGATAGGATAAGGCATGCAATCGGGGAAG
TTGGGATAGGGTTAGGGAATAGGGTCTGCGTACCCCCTCCCTGCTCTATT
TCCTCATTAACTCACATTATCGCGAAGGCGGTCCGATGAGAGGCTTCCGC
CGAAACGGTTATATATATATTTTTTTCAAGTCGGGGTGCGCCCGGTGGTG
TATTTTGGGGCGATGTCGTGGGTTTTATCATCTGTGTACAACCCTTTCGT
CTGCCTGGCCTTGGTAATTTTGATGGGGTGTTTTCATGCGGATGCGGACT
TCTTTTTACTATTGCGTTGTTTCCATCTGCTTCCGAAGGACATTACTACT
TGCAGAAATGATCACGGTGTTGGTGGTCCGAGCCGATGATCGTTTACCAA
CTTCCCGGGCCCTCCCTCCCCGCCCGCCCCCTCGTTTACGGATTAGGTGA
GCAACATTGACATCATGGCCTTCGAGACCTCCTGCAACGTGGCCACCAAC
ACCCGGGCGTGGAACAAGAGGACCCAGGGCTGGTTGGAGCGCTACGTCTA
CATGCGCACAGGTACGATACGTGATCGCGGGCTCGCGGCGGCCGCGTTCC
CCTGCTCCTGAGGGACAGGCCAAAGGGTTTAGCACCACCGCGGGGTCATG
TCGTCAGCAGGGGTGGGAGTGGTTTTGCTGACCCACCCCCCACCCCCCAC
CCACCGTACGTACAGCGCAGAAGAACGAGATTCTCTCGTTCGGTTATGTT
GTGCCGCGTTTTTTCGGGCCGCTGTCGTCGTCAGGTTGGCAGACGCTTTG
AGTAGGACACGGCCATGGCTCTACATCCTATTCAGGCATTACCAAGAGAG
GAATTCGCGACTTGCTGTTCGTGTGCGCCGTTGCTGTGCTTGTATTTGCG
TCGCTGGGGGGGGTTGCGTTTGCGGAGGGAGCCCCCCCCCCCCCCCCCTC
TTACCGCTATTTAGTGTTGTTTCACTCGCGAAGGGAGGTCTGTGTCTTCT
TTTTTTCTTTTTGCATTTTCGAGTCGTGATGTTACGTGTCCCACACCGTC
GTTTGTCTTCTTCCCCCTGCGCTCGCTCGTTTTTTGTGTTTCGCCTGTTT
TCTGGATATGTGGTTGGGTGCAGGCAGCAGCCTGACCGCCACGTACTTTG
TGTCGGCATTCTGGCACGGATTCTACCCCGGCTACTACCTGTTCTTCATG
TGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9934:1489..5491-

>mRNA_Ecto-sp8_S_contig9934.31797.1 ID=mRNA_Ecto-sp8_S_contig9934.31797.1|Name=mRNA_Ecto-sp8_S_contig9934.31797.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=612bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9934:1489..5491- (Ectocarpus species8 EcLAC_412)
ATGCCCAATCCGCTCGAGTTCTTCGGCTTCATCTACTGCTTCTCGTCCAT
CCTCGCCGGCCCGGCGTTCGAGTACAAGGAGTACGACAACGCCACCAGCG
GCAAGGCTTACGAGAAGGACGGCAAGCCGCACCCGATGCCCTCCAACTGG
GCGGCCGCTCTGTCCAAGTTCGGGTCGGGCATGCTCTGCCTCACTCTCTT
CCAGGTCGGCAGCGGCTACTTTCCGCTCACGGGAATGCGATCGTCGGCGG
TGGCAGGTATGGCTATCCCCAAGCGGATCGTGAACGCGTGGATCACCCTC
TTCTTCGTGCGGATGAAGTACTTCTTCGCCTGGAAGACCGCCGACGGGGC
TTCCGTGCTTGCAGGCTTTGGATTCCAGGGCTACGGGCCTGACGGACAAG
TCGCCGGCTGGGACGGGGTGAGCAACATTGACATCATGGCCTTCGAGACC
TCCTGCAACGTGGCCACCAACACCCGGGCGTGGAACAAGAGGACCCAGGG
CTGGTTGGAGCGCTACGTCTACATGCGCACAGGCAGCAGCCTGACCGCCA
CGTACTTTGTGTCGGCATTCTGGCACGGATTCTACCCCGGCTACTACCTG
TTCTTCATGTGA
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