mRNA_Ecto-sp8_S_contig98136.31601.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: UPI000C77EF11 (importin-4-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C77EF11) HSP 1 Score: 109 bits (272), Expect = 1.860e-24 Identity = 69/187 (36.90%), Postives = 100/187 (53.48%), Query Frame = 1
Query: 1 ELMVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIMKGECAARTWRRRRAGWRS--RLSRTRCCLSMLEKSCPTLA-------FASYFV--LHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
E++ EE EH +VI++LD +T +LK CK VT G EKIV+ + IMK ECA + + G + + P L FA YF+ L ++ E SFA+GA+AD ++PL L+ F +LP+F + +D E D RNNAV GLGE++LWGG+++ HY +L
Sbjct: 754 EMIEEESEHSVVISSLDGITEMLKHCKLGVTSLPGIPEKIVTSVTKIMKKECACQD-KEEEEGLEEDEEAEQDEMLFEYAGEVLPNLGRAMTPDGFAPYFMGLLQMLLKKTKKQCSTAERSFAVGALADCMEPLQGRLESFKQFVLPVFQDSVKDEETDVRNNAVYGLGEMVLWGGEIMVPHYNQIL 939
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A2J7RQ70_9NEOP (Uncharacterized protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RQ70_9NEOP) HSP 1 Score: 92.4 bits (228), Expect = 1.340e-18 Identity = 60/187 (32.09%), Postives = 100/187 (53.48%), Query Frame = 1
Query: 1 ELMVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM--KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLA-------FASYF--VLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
EL+ +EE +V+ ALDA + LLK+ K V EG GH + I++CI+ +M K EC + + + P L FA Y +L A ++ + SFA+G +++S++PL + F+P LLP+F++++RD D+ RNNA+ G+GE++L G + + HY+ +L
Sbjct: 295 ELIRTDEERTVVMTALDAYSELLKEIKGPVLEGEGHRDAIINCIKDVMTYKTECQDKGDEDGANSDDPEAEQDEMVIEYAGDIVPNLGKAMTPDDFAQYLGQLLPLFANRMKKQCTVAQRSFAVGTLSESMEPLGPRIGQFVPQLLPLFLQVSRDESDEVRNNAIFGIGEMVLHGKEALFPHYSEIL 481
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: UPI000B8EB301 (importin-4-like isoform X1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=UPI000B8EB301) HSP 1 Score: 91.3 bits (225), Expect = 3.720e-18 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1
Query: 1 ELMVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM--KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLA-------FASYF-VLHRAAANPAQED-QETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
EL+ +EE +V+ ALDA T +LK+ + V EG GH + I +C++ +M K EC + + P L FA YF VL AN ++ + SFA+G +++S++PL + F+P LLP+F+E++RD D+ RNNA+ G+GE+ L G + V HY +L
Sbjct: 749 ELIHTDEERSVVMRALDAYTEVLKEIRGPVLEGEGHRDAIFNCVKDVMTYKTECQGEEDEDGVNMDDPEAEQDEMLIEYAGDIVPVLGKAMAPDDFAQYFRVLLPLFANRTKKHCTVAQRSFAVGTLSESLEPLGPNIGQFVPQLLPLFLELSRDESDEVRNNAIYGIGEMALHGKEAVFPHYLEIL 935
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A6L2PE60_COPFO (Importin N-terminal domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PE60_COPFO) HSP 1 Score: 89.7 bits (221), Expect = 1.290e-17 Identity = 58/187 (31.02%), Postives = 98/187 (52.41%), Query Frame = 1
Query: 1 ELMVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM--KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLA-------FASYFVLHRAAANPAQEDQET--ETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
EL+ +EE +V+AALDA + LLK+ K V EG GH + I++C++ +M K +C + + + P L F YF L Q T + SF++G +++S++PL + F+P LLP+F+++++D D+ RNNA+ G+GE++L G + HY+ +L
Sbjct: 813 ELIHTDEERTVVMAALDAYSELLKEVKGPVLEGEGHRDAIINCVKDVMSCKTQCQDIADDDESNSDDPEAEQDEMLVEYAGEIVPNLGKAMTPDDFTQYFSLLLPLFTSRMRKQCTVSQRSFSVGTLSESMEPLGSRIGQFVPQLLPLFLQLSKDESDEVRNNAIFGIGEMVLHGKDSLFPHYSEIL 999
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A067R1N6_ZOONE (Importin-4 (Fragment) n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R1N6_ZOONE) HSP 1 Score: 87.0 bits (214), Expect = 1.140e-16 Identity = 62/194 (31.96%), Postives = 98/194 (50.52%), Query Frame = 1
Query: 1 ELMVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM---------KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLA-------FASYF-VLHRAAANPAQED-QETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
EL+ +EE +V+ ALDA T +LK+ + V EG GH + I +C++ +M + EC + + P L FA YF VL AN ++ + SFA+G +++S++PL + F+P LLP+F+E++RD D+ RNNA+ G+GE+ L G + V HY +L
Sbjct: 1120 ELIHTDEERSVVMRALDAYTEVLKEIRGPVLEGEGHRDAIFNCVKDVMTYNNVMFLLQTECQGEEDEDGVNMDDPEAEQDEMLIEYAGDIVPVLGKAMAPDDFAQYFRVLLPLFANRTKKHCTVAQRSFAVGTLSESLEPLGPNIGQFVPQLLPLFLELSRDESDEVRNNAIYGIGEMALHGKEAVFPHYLEIL 1313
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A553N9V2_TIGCA (Importin N-terminal domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N9V2_TIGCA) HSP 1 Score: 85.1 bits (209), Expect = 5.360e-16 Identity = 57/196 (29.08%), Postives = 85/196 (43.37%), Query Frame = 1
Query: 31 IVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIMKGECAARTWRRRRAGWRSRLSRTRCC----------------------------LSMLEKSCPTLAFASYF--VLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
+V LD + LLK+C + V G+ E I C++++MK ECA ++ CC L L + AF+ YF +L + +E SF G++AD +KPL LDP++ L PIF+ + D EDD RNNA+ GLGE+ G + Y+ +L
Sbjct: 1031 VVSMCLDQLAYLLKECLSGVAGIPGYPEMITQCVRLVMKSECAC-------------MATESCCDRDCKCEPEDENIQSEQDEVLFEYAGEVLPALGNAMNPTAFSPYFAGMLPHLLKKTKKSCTVSERSFGAGSLADCMKPLQGALDPYIKTLFPIFLTLLNDDEDDVRNNAIFGLGELAFRSGPAMYDKYSTIL 1213
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A7R9JDK5_TIMCA ((California timema) hypothetical protein n=1 Tax=Timema californicum TaxID=61474 RepID=A0A7R9JDK5_TIMCA) HSP 1 Score: 80.5 bits (197), Expect = 2.090e-14 Identity = 48/173 (27.75%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 16 EEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM--KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLAFASYFVLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
+EE +V+AALD LL + K V EG GH + I++CI+ +M K EC + ++ +L A N ++ ++ SF++G +++ ++PL + F+P LLP+F+++ +D D+ RNNA+ G+GE++L G + + ++ +L
Sbjct: 759 DEERGVVMAALDVYCDLLTEVKRPVLEGEGHRDAIINCIKDVMTYKTECQDKE----------------------DEGSDDPEAEQDEMLIECAGNIKKQCTVSQRSFSVGTLSECMEPLGPRVAQFVPQLLPLFLQLAKDESDEVRNNAIFGVGEMVLHGKEALYPYFPEIL 909
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A7R9I593_9NEOP (Hypothetical protein n=2 Tax=Timema TaxID=61471 RepID=A0A7R9I593_9NEOP) HSP 1 Score: 78.2 bits (191), Expect = 1.310e-13 Identity = 52/174 (29.89%), Postives = 91/174 (52.30%), Query Frame = 1
Query: 16 EEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIM--KGECAARTWRRRRAGWRSRLSRTRCCLSMLEKSCPTLA-------FASYF--VLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVV 504
+EE +V+AALD LL + K V EG GH + I++CI+ +M K EC + + + P+L FA YF +L A ++ ++ SF++G +++ ++PL + F+P LLP+F+++ +D D+ RNNA+ G+GE++L G + +
Sbjct: 716 DEERGVVMAALDVYCDLLTEVKRPVLEGEGHRDAIINCIKDVMTYKTECQDKE---DEGSDDPEAEQDEMLIECAGNIVPSLGKAVTPDDFAIYFGNLLPLFLAKTKKQCTMSQRSFSVGTLSECMEPLGPRVAQFVPQLLPLFLQLAKDESDEVRNNAIFGVGEMVLHGKEAL 886
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: UPI00083C8E7D (importin-4-like n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083C8E7D) HSP 1 Score: 77.0 bits (188), Expect = 3.310e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 19 EEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIMKGECAARTWRRR----RAGWRSRLSRTRCC---LSMLEKSCPTLAFASYF--VLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
+E + I+ LDA T LLK+ K+ V G GH E I++CI +M G+ + + +L C LS K P F YF VL + E + SFA+G I++ L + F+ LLP +++T D + RNNA+ G+GE++L G V HYT +L
Sbjct: 766 DERAVAISGLDAYTELLKEIKSDVLIGEGHKEAIMNCITDVMLGKTECQDQEETDDLDTEAEQDQLL-VECSGDVLSNFGKVIPPEDFELYFQTVLPMLLERLKKNKSEAQRSFAVGTISECFSGLKHKVAGFVCQLLPTLLKLTDDPSAEVRNNAIYGIGELVLHGKDAVYMHYTDIL 943
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Match: A0A310SA27_9HYME (Importin-4 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=A0A310SA27_9HYME) HSP 1 Score: 77.0 bits (188), Expect = 3.420e-13 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 19 EEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIMKGECAARTWRRR----RAGWRSRLSRTRCC---LSMLEKSCPTLAFASYF--VLHRAAANPAQEDQETETSFAIGAIADSIKPLARVLDPFLPHLLPIFVEMTRDAEDDCRNNAVCGLGEVILWGGQVVEQHYTAVL 528
+E + I+ LDA T LLK+ K+ V G GH E I++CI +M G+ + + +L C LS K P F YF VL + E + SFA+G I++ L + F+ LLP +++T D + RNNA+ G+GE++L G V HYT +L
Sbjct: 1240 DERAVAISGLDAYTELLKEIKSDVLIGEGHKEAIMNCITDVMLGKTECQDQEETDDLDTEAEQDQLL-VECSGDVLSNFGKVIPPEDFELYFQTVLPMLLERLKKNKSEAQRSFAVGTISECFSGLKHKVAGFVCQLLPTLLKLTDDPSAEVRNNAIYGIGELVLHGKDAVYMHYTDIL 1417 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig98136.31601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig98136.31601.1 >prot_Ecto-sp8_S_contig98136.31601.1 ID=prot_Ecto-sp8_S_contig98136.31601.1|Name=mRNA_Ecto-sp8_S_contig98136.31601.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=174bp MVEEEEHQIVIAALDAMTVLLKQCKNAVTEGAGHCEKIVSCIQMIMKGECback to top mRNA from alignment at Ecto-sp8_S_contig98136:36..563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig98136.31601.1 ID=mRNA_Ecto-sp8_S_contig98136.31601.1|Name=mRNA_Ecto-sp8_S_contig98136.31601.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=528bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98136:36..563+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig98136:36..563+ >mRNA_Ecto-sp8_S_contig98136.31601.1 ID=mRNA_Ecto-sp8_S_contig98136.31601.1|Name=mRNA_Ecto-sp8_S_contig98136.31601.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=522bp|location=Sequence derived from alignment at Ecto-sp8_S_contig98136:36..563+ (Ectocarpus species8 EcLAC_412)back to top |