mRNA_Ecto-sp8_S_contig980.31583.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig980.31583.1
Unique NamemRNA_Ecto-sp8_S_contig980.31583.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D8LJ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ57_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 7.800e-164
Identity = 309/375 (82.40%), Postives = 318/375 (84.80%), Query Frame = 1
Query:    1 MKLRDVLLSRVLTFLAACCAVQAHPFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECDTTKIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGPDDGDKSTAAA-ANDVPAPTS-SXXXXXXXXXXXXXXXXAGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGKTGGGGTGPSPIPESNSWTVRKKEAPKQQHQQ 1119
            MKL  +LLS VL FLAACCAVQA PFPD+ TW+KHCDEIPD+ATLTAGGTLTFLGTIECDTTKIIEI GNTVIRSHESL TAGIALLVHPGAELTIRAPTINMKKGK         SMQDQQPILRVLGSVDFQVTSWVKEH+EG PVDDHGI+SVEGEG VRSDKAI FTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMH KSNIASDSAA TVE LSPQTSD TPXXXXXXXXXXXXXXXXXX                          ANDVPAPTS +XXXXXXXXXXXXXXXX   NVGN+PAAGASTADSMTTRARE R+RGSTVSENGKTG GGTGPSPIPESNSWTVRKKEA KQQHQQ
Sbjct:    1 MKLFYMLLSGVLAFLAACCAVQARPFPDEKTWVKHCDEIPDEATLTAGGTLTFLGTIECDTTKIIEITGNTVIRSHESLDTAGIALLVHPGAELTIRAPTINMKKGK---------SMQDQQPILRVLGSVDFQVTSWVKEHLEGAPVDDHGIISVEGEGMVRSDKAILFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHAKSNIASDSAAPTVEDLSPQTSDPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDVPAPTSPAXXXXXXXXXXXXXXXXXXXNVGNSPAAGASTADSMTTRAREGRDRGSTVSENGKTGSGGTGPSPIPESNSWTVRKKEASKQQHQQ 366          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D8LNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC7_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 2.630e-64
Identity = 176/372 (47.31%), Postives = 220/372 (59.14%), Query Frame = 1
Query:    1 MKLRDVLLSRVLTFLA-ACCAVQAHPFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECDTT-KIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPP-FSTAAGP---DDGDKSTAAAANDVPA---PTSSXXXXXXXXXXXXXXXXAGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGK---TGGGGTGPSPIPESNSWT 1080
            M L  VLL  +L FLA A    QA PF D  TWI+ CD+IP  ATL AG TLT L +I+C    K I + G+TV+RSH  + T G+AL VHPGA+LTIRAPT+ MK+ +            D QPILRV GS+ F+VT W+ EH++GT +D HG+V+ EG+G++ S   I +TA SV+VADPAAA++KEAD   TSMP DP L RKL   H KSN   DSA    + +S  T+++ P                   T PNR   FST A P   DDGDK TAAA+   P    P ++X   XXXXXXXXXXXX             S A+ MT++ARE R     V+++GK    GGGG   SPIP SN+WT
Sbjct:    1 MHLPKVLLYGILAFLAYAIPGTQARPFGDGPTWIRSCDDIPAKATL-AGTTLTILSSIDCSANPKTIVVTGDTVVRSHAPMNTMGVALKVHPGAKLTIRAPTVMMKRRE-----------MDNQPILRVFGSIQFEVTRWLPEHLDGTLMDKHGVVAFEGQGSLESRNTIRYTAASVVVADPAAADQKEADLTATSMPTDPELRRKLDNRHAKSNRERDSATAVAKDMS--TTNTAPTATVGDVADNKSSSSA--TTAPNRAAAFSTVADPNDNDDGDK-TAAASEATPTSSTPATAXAAPXXXXXXXXXXXXXXXXXXXXXXXXXSMAEFMTSKAREARA----VNDHGKKAGAGGGGERSSPIPVSNTWT 351          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D7G9B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B0_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 7.670e-64
Identity = 144/312 (46.15%), Postives = 181/312 (58.01%), Query Frame = 1
Query:   58 AVQAHPFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECDTTKIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAAT--TVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGPDDGDK---STAAAANDVPAPTSSXXXXXXXXXXXXXXXX---AGENVGNNPAAGASTADSM 969
            +  A PF D  TWI+ C +IP  ATLT GGTLT L  I C T K I I G+TVIRSH +L T G+ L+VH GA +TIRAPT+ M+K +    Q          P+LRV GSV+F+VT+WV EH+EGT  D+HGIVS EG+G VRS  AI +T+ +VIVA+PAAA KKEADP ET+MP DP L RKLA MH + ++ ++   T   +  ++P    +T                   A  PNR PFS+ A PDD      ++ AAAN  P P S+  X                A  NVGNNPA+G S AD M
Sbjct:   45 STSARPFGDGDTWIRTCADIPAAATLT-GGTLTLLRDIHCATLKTIHITGDTVIRSHSALNTMGVGLVVHSGARVTIRAPTVLMQKTETMRGQ----------PVLRVQGSVEFEVTNWVPEHLEGTLADNHGIVSCEGQGLVRSKMAILYTSSAVIVANPAAAFKKEADPVETAMPTDPDLRRKLAIMHARMSMDNNEDVTGNNLSSINPDPPAAT---------VVADAKSSSPAAAPNRKPFSSVAAPDDSXXXXXNSPAAANPGPGPASAATXATAGSSPSSAVDPKALAPANVGNNPASGMSIADFM 336          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 4.780e-57
Identity = 188/424 (44.34%), Postives = 232/424 (54.72%), Query Frame = 1
Query:    1 MKLRDVLLSRVLTFLA-ACCAVQAHPFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIEC-DTTKIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQ-----------------------------------------DQQPILRVLGSVDFQVTSWVKEHVEGTPV-------------------DDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGPDDGDKSTAAAANDVPAPTSSXXXXXXXXXXXXXXXXAGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGK---TGGGGTGPSPIPESNSW 1077
            M L  VLL  +L FLA A   +QA PF D  TWI+ CD+IP +ATL AG TLT L +I+C D  K I + G+TV+RSH  + T GIAL VH GA+LTIRAPT+ MK+ +       +L +                                          D QPILRV G+V F VT W+ EH++GT V                   D  G+V+ EG+G++ S   I +TA SV+VADPAAA++KEAD   +SMP DP L RKL   H KSN   DSAA T   +     +    XXXXXXXXXXXXXXXXX    +          DDGDK TA+A+   PA +  XXXXXXXXXXX        +VG NPA+GAS A+ MT +AR  R    TV+++GK    GGG  G SPIP SNSW
Sbjct:    1 MHLPKVLLYGILAFLACAMSGIQARPFGDGPTWIRSCDDIPTEATL-AGTTLTILSSIDCGDNPKTIVVTGDTVVRSHAPMNTMGIALKVHAGAKLTIRAPTVVMKRREIKVFYSLRLRLSHTSGTVVISSWCSFPLYISMKAISPLPCARVRRCYTVRLKMDNQPILRVFGNVQFDVTRWLPEHLDGTLVSSKAMIEQPAKDFAAMCSMDKDGVVAFEGQGSLESRNTIRYTATSVVVADPAAADQKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATAATVGEVADEKFSSXXXXXXXXXXXXXXXXXXXXXS----------DDGDK-TASASEATPASSXXXXXXXXXXXXXAADPSTRADVGTNPASGASMAEFMTGKARHAR----TVNDHGKKAVAGGGXEGSSPIPVSNSW 408          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 5.540e-57
Identity = 166/343 (48.40%), Postives = 210/343 (61.22%), Query Frame = 1
Query:   73 PFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECDTT-KIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPP-FSTAAGPDDGDKSTAAAANDVPAPTSSXXXXXXXXXXXXXXXXAGE--NVGNNPAAGASTADSMTTRAREVRERGSTVSENGK---TGGGGTGPSPIPESNSWT 1080
            PF D  TWI+ CD+IP +ATL AG TLT L +I+C    K I + G+TV+RSH  + T G+AL VHPGA+LTI APT+ MK+ +            D QPILR  GS+ F+VT W+ EH++GT +D HG+V+ EG+G++ S   I +TA SV+VADPAAA++ EA+   TSMP DP L R+L   H KSN   DSAA   + +S  T+++ P       XXXXXXXXXXX   PNR   FST A P+                   XXXXXXXXXXX          +VGNNPA+GAS A+ MT +ARE R     V+++GK    GGGG   SPIP SNSWT
Sbjct:   39 PFGDGPTWIRSCDDIPAEATL-AGTTLTILSSIDCGANPKTIVVTGDTVVRSHAPMNTMGVALKVHPGAKLTICAPTVMMKRRE-----------MDNQPILRAFGSIHFEVTRWLPEHLDGTLMDKHGVVAFEGQGSLESRNTIRYTATSVVVADPAAADQNEANLTATSMPTDPELRRRLDIRHAKSNRERDSAAAAAKDMS--TTNTAPTATVGEVXXXXXXXXXXXX--PNRAEAFSTVADPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAADPSTRADVGNNPASGASMAEFMTGKAREARA----VNDHGKKAGAGGGGEVSSPIPVSNSWT 361          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D8LNB1_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.290e-52
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1
Query:   64 QAHPFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECDTT-KIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTP 705
            QA PF D  TWI+ CD+IP +ATL AG TLT L +I+C    K I + G+TV+RSH  + T G+AL VH GA+LTIRAPT+ MK+           S  + QPILRV GS+ F+VT  + EH++GT +D HG+V+ EG+G++ S   I +TA SV+VADPAAA++ EA+   TSMP DP L R+L   H KSN   DSAA   + +S  T++S P
Sbjct:    5 QARPFGDGPTWIRSCDDIPAEATL-AGTTLTILSSIDCGANPKTIVVTGDTVVRSHAPMNTMGVALKVHHGAKLTIRAPTVMMKR-----------SEMNNQPILRVFGSIQFEVTRRLPEHLDGTLMDKHGVVAFEGQGSLESRNTIMYTATSVVVADPAAADQNEANLTATSMPTDPELRRRLNIRHAKSNRERDSAAAADKDMS--TTNSAP 205          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: A0A6H5KKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.610e-36
Identity = 121/288 (42.01%), Postives = 154/288 (53.47%), Query Frame = 1
Query:  241 TAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGPDDGDKSTAAAANDVPAPTSSXXXXXXXXXXXXXXXXAGE--------------------------NVGNNPAAGASTADSMTTRAREVRERGSTVSENGK 1026
            T GIAL VH GA+LTIRAPT+ MK+ +            D QPILRV G+V F VT W+ EH++GT +D+HG+V+ EG+G++ S   I +TA SV+VADPAAA++KEAD   +SMP DP L RKL   H KSN   DSAA T + +S  T+++ P             XXXXX              PD+GD     AA     P SS     XXXXXXXX   A                             VGNNPA+GAS A+ MT +AR+ R     V+++GK
Sbjct:    3 TMGIALKVHAGAKLTIRAPTVVMKRRE-----------MDNQPILRVFGNVQFDVTRWLPEHLDGTLMDEHGVVAFEGQGSLESRNTIRYTATSVVVADPAAADQKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATAKGMS--TTNTVPTATVGEVADDKSSXXXXXXNXXXXXXXXXXXAPDEGDDGDNTAAAPKATPASSTHATAXXXXXXXXAETAANPTTRADVATTSLPVRRYXXXXXXXXXXVGNNPASGASMAEFMTGKARQARA----VNDHGK 273          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: A0A6H5K3Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q0_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.980e-29
Identity = 93/218 (42.66%), Postives = 120/218 (55.05%), Query Frame = 1
Query:  427 VEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGP---DDGDKSTAAAANDVPAPTSSXXXXXXXXXXXXXXXX-AGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGKTGG-GGTGPSPIPE 1065
            V  +  D+HGIVS EG+G  RS  AI +T+ +VIVA+P+AA K+EADPAET+MP DP L RKL  MH +S + +D      E ++  T  S                    A+  NR PFS+ A P   DDGD  + AAAN VPA T++                 A  NVGNNPA+G S AD    +ARE R+ GS V+  G+ GG GG GPS +P+
Sbjct:    2 VSDSQADNHGIVSCEGQGFFRSKMAILYTSSAVIVANPSAAFKREADPAETAMPTDPELRRKLNIMHARSRMNND------EDVTGNTLSSINLDPPSATVVADAKSSSPAASL-NRKPFSSVASPNDNDDGDDKSPAAANSVPASTATAAPSGSSPPSAADLKTSAPANVGNNPASGMSKADFFMDKARESRDVGSAVNVGGEKGGDGGRGPSTVPQ 212          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: A0A6H5KH58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH58_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 9.600e-29
Identity = 145/411 (35.28%), Postives = 180/411 (43.80%), Query Frame = 1
Query:  241 TAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSM-----------------------------------------------------------------QDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANK---------------------------------------------------------------KEADPAETSMPADPHLLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPXXXXXXXXXXXXXXXXXXATFPNRPPFSTAAGPDDGDKSTAAAANDVPAPTSSXXXXXXXXXXXXXXXXAGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGKTG---GGGTGPSPIPESNSWT 1080
            T GIAL V PGA+LTIRAPT+ MK+ +ASAHQ E++                                                                    D QPILR  GS+ F+VT W+ EH++GT +D HG+V+ EG+G++ S   I FTA SV+VADPAAA++                                                               KEAD   +SMP DP L RKL   H KSN   DSAA T   +     +   XXXXXXXXXXXXXXXXXX    +          DDGDK TA A+    A +++     XXXX          +VG NPA+GAS A+ MT +AR  R    TV+++GK     GGG G SPIP SNSWT
Sbjct:    3 TMGIALKVQPGAKLTIRAPTVMMKRREASAHQHEQVETTSTILLKTYPIVYFVANNFWCRFKNVYSLRFIVFLSAVNFNEGNLPPPCARARRCCPISNIVRRKMDDQPILRAFGSIHFEVTRWLPEHLDGTLMDKHGVVAFEGQGSLESRTTIRFTATSVVVADPAAADQRKIQKATSHLHLAITSWRARSLDKNMLQESCPCTAVRMTKSLTPSFSLYPPPTLHAHRNNQLQKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATAATVGEVADEXXXXXXXXXXXXXXXXXXXXXXXXXS----------DDGDK-TAPASEATLASSTATATPAXXXXGTAADPSTRADVGTNPASGASMAEFMTGKARHAR----TVNDHGKKAVADGGGEGSSPIPASNSWT 398          
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Match: D7FMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 3.730e-28
Identity = 78/179 (43.58%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   73 PFPDKMTWIKHCDEIPDDATLTAGGTLTFLGTIECD-TTKIIEII-GNTVIRSHESLYTAGIALLVHPGAELTIRAPTINMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDDHGIVSVEGEGTVRSDKA-IFFTARSVIVADPAAANKKEADPAETSMPADPH 600
            P  D  T I++C +IP  AT+ AGG L FLG I+C  T+K IE + G+T IRS  S+ T G+ L+VHP A LTI+APT+++ + +A         MQD  P+L +LGS+DFQVT+W+++  +GT +D+ G+V V  +G V +D + + +TA SV+V+    A+K  ADP  +S  A  H
Sbjct:   23 PTYDTATVIRNCGDIPPKATVHAGGALKFLGDIDCGKTSKTIEFMSGDTEIRSPTSITTMGLTLIVHPAARLTIQAPTVSLARTEA---------MQDD-PVLVLLGSIDFQVTTWLEQPFDGTMLDERGVVWVGDQGVVLADNSKVTYTATSVVVS----ASKNVADPVASSEEASFH 187          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig980.31583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LJ57_ECTSI7.800e-16482.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNC7_ECTSI2.630e-6447.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G9B0_ECTSI7.670e-6446.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5J3_9PHAE4.780e-5744.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB6_ECTSI5.540e-5748.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB1_ECTSI1.290e-5249.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KKU9_9PHAE1.610e-3642.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q0_9PHAE3.980e-2942.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH58_9PHAE9.600e-2935.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMM4_ECTSI3.730e-2843.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig980contigEcto-sp8_S_contig980:6945..10163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1120
Hectar predicted targeting categorysignal peptide
Exons5
Cds size1119
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145347.1066256-CDS-Ecto-sp8_S_contig980:6944..71331681145347.1066256-CDS-Ecto-sp8_S_contig980:6944..7133Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig980 6945..7133 +
1681145347.121747-CDS-Ecto-sp8_S_contig980:8103..82621681145347.121747-CDS-Ecto-sp8_S_contig980:8103..8262Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig980 8104..8262 +
1681145347.1359925-CDS-Ecto-sp8_S_contig980:8593..86861681145347.1359925-CDS-Ecto-sp8_S_contig980:8593..8686Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig980 8594..8686 +
1681145347.1520443-CDS-Ecto-sp8_S_contig980:9098..92121681145347.1520443-CDS-Ecto-sp8_S_contig980:9098..9212Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig980 9099..9212 +
1681145347.1685305-CDS-Ecto-sp8_S_contig980:9599..101631681145347.1685305-CDS-Ecto-sp8_S_contig980:9599..10163Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig980 9600..10163 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig980.31583.1prot_Ecto-sp8_S_contig980.31583.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig980 6945..10163 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig980.31583.1

>prot_Ecto-sp8_S_contig980.31583.1 ID=prot_Ecto-sp8_S_contig980.31583.1|Name=mRNA_Ecto-sp8_S_contig980.31583.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=373bp
MKLRDVLLSRVLTFLAACCAVQAHPFPDKMTWIKHCDEIPDDATLTAGGT
LTFLGTIECDTTKIIEIIGNTVIRSHESLYTAGIALLVHPGAELTIRAPT
INMKKGKASAHQGEKLSMQDQQPILRVLGSVDFQVTSWVKEHVEGTPVDD
HGIVSVEGEGTVRSDKAIFFTARSVIVADPAAANKKEADPAETSMPADPH
LLRKLAAMHTKSNIASDSAATTVEYLSPQTSDSTPPAAAAATQQLADDKS
SSSATFPNRPPFSTAAGPDDGDKSTAAAANDVPAPTSSPAAPSTPSSAAS
PIAAAGENVGNNPAAGASTADSMTTRAREVRERGSTVSENGKTGGGGTGP
SPIPESNSWTVRKKEAPKQQHQQ
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mRNA from alignment at Ecto-sp8_S_contig980:6945..10163+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig980.31583.1 ID=mRNA_Ecto-sp8_S_contig980.31583.1|Name=mRNA_Ecto-sp8_S_contig980.31583.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3219bp|location=Sequence derived from alignment at Ecto-sp8_S_contig980:6945..10163+ (Ectocarpus species8 EcLAC_412)
ATGAAACTCCGTGACGTGCTGCTGTCTCGCGTGCTGACCTTCCTCGCCGC CTGCTGCGCGGTACAAGCTCACCCCTTCCCCGACAAGATGACGTGGATCA AGCACTGCGACGAGATCCCGGATGATGCCACCCTGACCGCTGGAGGAACC CTGACGTTCCTCGGCACCATCGAGTGCGACACGACCAAGGTGAGAGAAAA AGACGCACTTCTTCTTTGAACCCCTCGGGAGAGGTCATCATTCTCAACAG CTGCATGCAGCAGGAGCAGCAGCAGCAGAAGCAGTGCTTCGGAGAAGTTT TTGGGGCAGAACGAAGAAGAAGAAGCGTGAGTGTTGTGCAGGTTTGGGTC TTGGCAGGAGGAGGAGGAGCCGTTGGCCTGTGCTGCATGATCCTCGTTGC CAGTTCGTAGGCACTGCTGCTGTAGCGGCGCCGTTGCGCGGAGCCCGCGA CCAAGATTCTGCTTCCTGCCCGAGTGTGAAGGCAGGATCCGGCTTCTTTG GCTCGAACTCGACCGCGGTTGGCTGCGATACCGTTTCGAAAATTGTGAGA TCATACTTCTGCTGCTGAGCGCACGAGCGAGGGCTCGCGCTTCTATACAG CTGTGTATTTCCTCGGATCCGCTAACTTTTCTAGCATCCGATGTGTGCGT GTGTAGCCACCTCTACCGGCCAACCGCTGCGTGTGTGTGCGCGCGCACCT TGCATGTAAGACTACTACTACTGTATTTGTGTATGCAGCAGAAAACCACC ACTCCTGTCCATGAGGTTGTCGGGTCGGTTGCCTTTGGATCCTGTTCGAC TGTGGGTATATCTCGAATGGGTAGTCTTTCTGTGAGTGTATTTTTTCTCT AAATGGTGATTGCTATCGGGCCACTACTTGTGTAGTTCGAAGTATAATTT TCTCTTGCAAGAAGCAAGTGTCAGGATCCTCTCAGGTTCGCCTCACGCAA AGTGCATGATCAACATCTTCTTCATGAATGACTCAAGTAGGGACAAAAAA GAGCTGCATCGGATGGATACAGCAGTAGACTACTATTGCTTTGTGCTTCG CACTCTCGCGACCATGTCTGGAGGGTAAAATATACATAAATACCCACCGG ATATATGCAAACAAATGTATTTAACCGTCGATTTTCCTTTATTTCTTGGT TGTACACAGATCATCGAAATTATCGGCAACACGGTCATCCGCTCTCACGA GTCGCTGTACACCGCGGGGATCGCACTGCTTGTACACCCCGGAGCGGAGC TGACGATCAGAGCACCGACCATCAACATGAAAAAGGGCAAGGCAAGTGCA CATCAGGGTGAAAAATTAGTCTACCCACCATTGCAACGGTACCGGAGAGT ACCCGCCCCATCCTATGCAACATATATGATATACACCTGCCAGGTCACCT GGAGAAGAAGCCTACCCGTTTGTCACGTAAAATTTTGCGGTAACATAATC TTCCTGGTACATGATTTGCTTGTTTGAGAAAGACCATCGCCGCGTGTGTG CAATAAATTGGGGTGGAAGTCTCTCTCTCTCTCTCTCTGTGTCTCCCACT TCCTGTTGTTGTGGTTGGCGATAACTGGAGGAGTAAATCCTGACCCCCCC CCCCTCCGTTCGCTACACCCGTTGACTACGAACGAACCCGATTTGACAGA GCATGCAAGACCAACAACCCATCCTACGTGTGCTAGGAAGCGTGGACTTC CAGGTCACCAGCTGGGTGAAGGAGCATGTTGAGGGAACTCCGGTGAGCAC AGAGTGACGGTCGTACATCCCGATCAATATTGGGCGTCATGGCACGGTGC CTTGAATTGCCCCCCTCCTTCCAAGAAGTAAGATGGTTTAGGGCGATTAA AAAATGAAGTTTGTCTCAACCGTACAAAAAACTGGACGACTACCGTCGTA GCCCCCCAGCTGGAACTGGCCCCGTGAGGTAGTTTTTGTGCAATGAGCTA CGTGTTGTTTTCGAGACGCACACCGTGCAAACTTCATTTTCTGTACCGCC CCTACGTGAGAAACACCGCCACCACCACTCATATAAAAAATAACAAGATA GAACAACAACAACGTGAAAACAATATTGACAACAACAACAACAACAACAA CAATTGACTTCTGCTCCTCCTGCTGCTGCTGCTGCTGCTTTATCACGTGC CCAGGTGGACGACCATGGAATCGTCTCGGTTGAAGGTGAAGGAACGGTGC GTTCCGACAAGGCCATCTTCTTCACCGCGAGGTCCGTCATCGTTGCCGAC CCTGCCGCGGCCAACAAGGTACTGTGCTACGTTATTTTTTTTCGGGCGGA AGACATACAGTAGTAGATTATTTATTTCAGTTGTGTTTTGTTTGGCAGAA ACCTTTTTTTCCGGAGCAAGTTCATAGGGGCGGGTTGGTCCTCATTGTTG ACTGCAGCATATTACCATGAGGACGGTCGTTCCATTTTCTTCGAAGTTGT GACATTCCTCCCTGACATGCTCCAAGAATTGTTTCGAGGAATACCAGCCC CAGCTCCAAACGGAGAGTCTCACCTGTTGGTACCGCTGATGCAGTACGAA GAAGGCACTGACTGGCCTACCCACGCCCTCTCTTTCTCTCCCTCGCTCTT TCTCTCCGTCTGCTCTTCCCCCCCACGCACCGCGCCCACCCACAGACAAC AACAGAAAGAGGCCGACCCTGCAGAGACTTCGATGCCTGCAGACCCGCAC CTGCTCCGTAAGCTGGCCGCCATGCATACCAAGAGCAACATTGCAAGCGA CTCCGCCGCCACCACTGTCGAGTACCTTTCTCCGCAGACCTCCGACTCTA CTCCTCCTGCTGCTGCTGCCGCCACCCAACAACTCGCCGACGACAAGTCG TCCTCCTCGGCCACGTTCCCTAACCGCCCGCCATTCTCCACTGCCGCTGG TCCTGACGACGGCGACAAGAGCACCGCCGCTGCTGCCAACGACGTTCCCG CACCTACTTCTTCTCCCGCCGCTCCCTCCACGCCTTCTTCTGCCGCCAGC CCTATCGCTGCGGCTGGCGAGAACGTCGGCAACAACCCCGCCGCGGGTGC GTCCACGGCCGACTCCATGACGACCAGGGCCCGTGAGGTTCGAGAGCGCG GCAGCACCGTCAGCGAAAACGGTAAGACCGGCGGAGGGGGCACGGGCCCT TCGCCGATTCCCGAGTCCAACTCGTGGACTGTCCGCAAGAAGGAGGCACC GAAGCAGCAGCATCAACAA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig980:6945..10163+

>mRNA_Ecto-sp8_S_contig980.31583.1 ID=mRNA_Ecto-sp8_S_contig980.31583.1|Name=mRNA_Ecto-sp8_S_contig980.31583.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1119bp|location=Sequence derived from alignment at Ecto-sp8_S_contig980:6945..10163+ (Ectocarpus species8 EcLAC_412)
ATGAAACTCCGTGACGTGCTGCTGTCTCGCGTGCTGACCTTCCTCGCCGC
CTGCTGCGCGGTACAAGCTCACCCCTTCCCCGACAAGATGACGTGGATCA
AGCACTGCGACGAGATCCCGGATGATGCCACCCTGACCGCTGGAGGAACC
CTGACGTTCCTCGGCACCATCGAGTGCGACACGACCAAGATCATCGAAAT
TATCGGCAACACGGTCATCCGCTCTCACGAGTCGCTGTACACCGCGGGGA
TCGCACTGCTTGTACACCCCGGAGCGGAGCTGACGATCAGAGCACCGACC
ATCAACATGAAAAAGGGCAAGGCAAGTGCACATCAGGGTGAAAAATTAAG
CATGCAAGACCAACAACCCATCCTACGTGTGCTAGGAAGCGTGGACTTCC
AGGTCACCAGCTGGGTGAAGGAGCATGTTGAGGGAACTCCGGTGGACGAC
CATGGAATCGTCTCGGTTGAAGGTGAAGGAACGGTGCGTTCCGACAAGGC
CATCTTCTTCACCGCGAGGTCCGTCATCGTTGCCGACCCTGCCGCGGCCA
ACAAGAAAGAGGCCGACCCTGCAGAGACTTCGATGCCTGCAGACCCGCAC
CTGCTCCGTAAGCTGGCCGCCATGCATACCAAGAGCAACATTGCAAGCGA
CTCCGCCGCCACCACTGTCGAGTACCTTTCTCCGCAGACCTCCGACTCTA
CTCCTCCTGCTGCTGCTGCCGCCACCCAACAACTCGCCGACGACAAGTCG
TCCTCCTCGGCCACGTTCCCTAACCGCCCGCCATTCTCCACTGCCGCTGG
TCCTGACGACGGCGACAAGAGCACCGCCGCTGCTGCCAACGACGTTCCCG
CACCTACTTCTTCTCCCGCCGCTCCCTCCACGCCTTCTTCTGCCGCCAGC
CCTATCGCTGCGGCTGGCGAGAACGTCGGCAACAACCCCGCCGCGGGTGC
GTCCACGGCCGACTCCATGACGACCAGGGCCCGTGAGGTTCGAGAGCGCG
GCAGCACCGTCAGCGAAAACGGTAAGACCGGCGGAGGGGGCACGGGCCCT
TCGCCGATTCCCGAGTCCAACTCGTGGACTGTCCGCAAGAAGGAGGCACC
GAAGCAGCAGCATCAACAA
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