mRNA_Ecto-sp8_S_contig95781.31216.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig95781.31216.1
Unique NamemRNA_Ecto-sp8_S_contig95781.31216.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 1.410e-88
Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 1 
Query:    1 DGAHRSPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRS 585
            DGAHRS                       VNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVD+LLR+GADET PDRNGQQPADRVGHCMELGDV+LGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRS
Sbjct:  158 DGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRS 352
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 5.690e-30
Identity = 81/187 (43.32%), Postives = 104/187 (55.61%), Query Frame = 1 
Query:   16 SPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--AASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 570
            S L++ A  GHV  +R +I HG DV+A +   V ALH A A NKV+A+ VLL AGA+ +  S S  T LH+A+  +   E+A                          A+ AG+QG  E+VD+LLR GADET    NG + AD +G  +   D +   E   V +LLANAPADRAWRRR  LVLCRA
Sbjct:  162 SALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRI-PEEFEGVRKLLANAPADRAWRRRCSLVLCRA 347
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 5.080e-28
Identity = 79/190 (41.58%), Postives = 106/190 (55.79%), Query Frame = 1 
Query:   16 SPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLG-HEVVLVHELLANAPADRAWRRRGLLVLCRA-WLR 579
            S L+ AA  G   VLRA++ HGVDVN   + +  +LH+A   N+V A+ VL+EAGA ++       TP  L +      E+A+                      AA  AGRQG   +VD+LLR GADET  + +G+  A+ VGH +E     L   ++  V +LL NAPADRAWRRRGLLVLCRA W++
Sbjct:  158 SVLDFAAQKGDACVLRAILQHGVDVNRRTDGYT-SLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF-LDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIK 345
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.370e-27
Identity = 79/190 (41.58%), Postives = 104/190 (54.74%), Query Frame = 1 
Query:   16 SPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLG-HEVVLVHELLANAPADRAWRRRGLLVLCRA-WLR 579
            S L+LAA  G   VLRA++ HGVDVN   + +  +LH+A   N+V A+ VL+EAGA ++       TP   A       E+A+                      AA  AGRQG   +VD+LLR GADET  + +G+  A+ VGH +E     L   +V  V +LL NAP DRAWRRRG LVLCRA W++
Sbjct:  109 SVLDLAAQKGDACVLRAILQHGVDVNRRTDGYT-SLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCH-EAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIK 296
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 5.170e-25
Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 1 
Query:   76 HGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 570
            HG DVNA  N  + AL +A AF+K  A+ VL EAGA+I+  + + STPLH+AS ++  + + +                       A+ AG  G+AE+VD+LLR+GADET    NG   AD V    E  D  L  +V  V +LLA APADRAWRRRG L+L RA
Sbjct:  546 HGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQA-NGSTPLHVAS-QEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDS-LAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.460e-22
Identity = 94/188 (50.00%), Postives = 111/188 (59.04%), Query Frame = 1 
Query:   22 LELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGH----CMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRAW 573
            L+ AAS   V +LR +I HG++VN     F  ALH A   N+  A+ VL+ AGADIQ  + S S PL              XXXXXXXXXXXXXXXXXXXXXX A    R+GS ++V +LLR GADETI  + G+  ADR+G       E GD            LL  APADRAWRRRGLLVLC A+
Sbjct:  174 LDFAASSQDVEILRMLIDHGMEVNLAA-AFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARS------LLTRAPADRAWRRRGLLVLCHAY 354
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 9.160e-20
Identity = 72/200 (36.00%), Postives = 104/200 (52.00%), Query Frame = 1 
Query:    1 DGAHRSPLELAASGGHVGVLRAMIH-HGVDVNAGDNLFVPALHLAVAFN-----KVKAVKVLLEAGADI--QGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVG--HCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 570
            +G+  SPLE+AA  GH  VL+A++     +V+  ++L   ALH   +F+     K  AV+VLL AGAD+  +G + S +TPLHLA  +  +    +                       A    R     +V++LLR GADE +P+ +G  PAD VG     +L D     +   +H +LA APADR+WRRRG LVL R+
Sbjct:  242 NGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLR---GSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.490e-16
Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 1 
Query:  331 AASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 570
            A   AGRQG+AE+V+ LLR GADETI +  G +  D +G  +E  D  L  +V  V ELLANAPADRAWRRRG L++CRA
Sbjct:  250 AGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDR-LTEDVERVRELLANAPADRAWRRRGYLIMCRA 328
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.520e-16
Identity = 66/188 (35.11%), Postives = 88/188 (46.81%), Query Frame = 1 
Query:    7 AHRSPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPA-LHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGHCMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCR 567
            A R+ L  AA  G +G +RA++   VDVN      V + LH A    K   +  L+ AGA  +    +  TPL LA++   +   A                       A   A  QG A  V  LLR GADET+ D +G  PA  +G   E   +    ++VL+ E+L  APADRAWRRRG LV+ R
Sbjct:    2 ADRTHLHRAAQRGDIGAVRALVQ-AVDVNLRGGWRVESPLHAASRAGKPDVIACLVGAGAHTEVRDRNNDTPLLLAAWLGHATAIA------KLLASGARVDADGIPRSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSE--SLERAEDIVLIREMLRRAPADRAWRRRGWLVMLR 180
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BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.910e-16
Identity = 72/190 (37.89%), Postives = 95/190 (50.00%), Query Frame = 1 
Query:   22 LELAASGGHVGVLRAMIHHGVDVN--AGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRS----TPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGH-CMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 570
            + +A   GHVGV++A + HGVD +  A       ALH A   N+ +AV+VLLEAGAD    S   S    TPL LA+ +  S E A+                       A++    G  E+VD+LLR GA ET  +++G  PA+      +   D        LV  LLA APADRAWRRRG +V+ RA
Sbjct:  171 INVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPL-LAAAESMSNE-ALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALV--LLARAPADRAWRRRGWVVMLRA 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95781.31216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYD0_ECTSI1.410e-8886.15Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FKL4_ECTSI5.690e-3043.32Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNU3_9PHAE5.080e-2841.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI1.370e-2741.58Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE5.170e-2543.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI2.460e-2250.00Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LQN0_ECTSI9.160e-2036.00Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5KXK5_9PHAE1.490e-1657.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H9_ECTSI1.520e-1635.11Ankyrin repeat domain protein n=2 Tax=Ectocarpus T... [more]
D7FSI6_ECTSI1.910e-1637.89Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95781contigEcto-sp8_S_contig95781:1..585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score278.9
Seed ortholog evalue1.8e-72
Seed eggNOG ortholog2880.D7FYD0
Model size585
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Cds size585
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145319.7522607-CDS-Ecto-sp8_S_contig95781:0..5851681145319.7522607-CDS-Ecto-sp8_S_contig95781:0..585Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig95781 1..585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95781.31216.1prot_Ecto-sp8_S_contig95781.31216.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig95781 1..585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig95781.31216.1

>prot_Ecto-sp8_S_contig95781.31216.1 ID=prot_Ecto-sp8_S_contig95781.31216.1|Name=mRNA_Ecto-sp8_S_contig95781.31216.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=195bp
DGAHRSPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHLAVAFNKV
KAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVILLDHGADVNAQ
NDDDKTPLHFAASYAGRQGSAELVDVLLRQGADETIPDRNGQQPADRVGH
CMELGDVVLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRS
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mRNA from alignment at Ecto-sp8_S_contig95781:1..585+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig95781.31216.1 ID=mRNA_Ecto-sp8_S_contig95781.31216.1|Name=mRNA_Ecto-sp8_S_contig95781.31216.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=585bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95781:1..585+ (Ectocarpus species8 EcLAC_412)
GATGGGGCTCACAGGTCGCCGTTAGAACTCGCCGCTTCGGGAGGGCACGT
AGGCGTCTTGAGAGCGATGATCCACCACGGGGTCGACGTCAACGCCGGCG
ACAACTTGTTCGTGCCGGCCCTACATCTGGCGGTGGCTTTCAACAAGGTG
AAGGCCGTCAAGGTGCTCCTCGAGGCGGGAGCCGACATCCAAGGACACAG
CTTCAGCCGAAGCACGCCCCTCCACCTCGCTTCCTTCAAGCAGCCGAGCG
TCGAGTCTGCGGTGATCCTGTTGGACCATGGCGCGGACGTAAACGCGCAA
AACGATGACGACAAGACGCCCCTGCACTTCGCCGCCAGCTACGCCGGGCG
GCAAGGTAGCGCGGAGCTGGTAGACGTGCTGCTGAGGCAGGGTGCGGACG
AGACCATCCCCGACCGCAACGGCCAGCAGCCCGCCGACAGAGTTGGGCAC
TGCATGGAACTCGGCGACGTAGTGCTAGGACACGAGGTTGTGCTCGTGCA
CGAGCTGTTGGCGAACGCCCCGGCAGATAGGGCGTGGCGCCGCCGGGGCT
TGCTGGTCTTGTGCCGTGCTTGGCTCCGGAGGTCG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig95781:1..585+

>mRNA_Ecto-sp8_S_contig95781.31216.1 ID=mRNA_Ecto-sp8_S_contig95781.31216.1|Name=mRNA_Ecto-sp8_S_contig95781.31216.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=585bp|location=Sequence derived from alignment at Ecto-sp8_S_contig95781:1..585+ (Ectocarpus species8 EcLAC_412)
GATGGGGCTCACAGGTCGCCGTTAGAACTCGCCGCTTCGGGAGGGCACGT
AGGCGTCTTGAGAGCGATGATCCACCACGGGGTCGACGTCAACGCCGGCG
ACAACTTGTTCGTGCCGGCCCTACATCTGGCGGTGGCTTTCAACAAGGTG
AAGGCCGTCAAGGTGCTCCTCGAGGCGGGAGCCGACATCCAAGGACACAG
CTTCAGCCGAAGCACGCCCCTCCACCTCGCTTCCTTCAAGCAGCCGAGCG
TCGAGTCTGCGGTGATCCTGTTGGACCATGGCGCGGACGTAAACGCGCAA
AACGATGACGACAAGACGCCCCTGCACTTCGCCGCCAGCTACGCCGGGCG
GCAAGGTAGCGCGGAGCTGGTAGACGTGCTGCTGAGGCAGGGTGCGGACG
AGACCATCCCCGACCGCAACGGCCAGCAGCCCGCCGACAGAGTTGGGCAC
TGCATGGAACTCGGCGACGTAGTGCTAGGACACGAGGTTGTGCTCGTGCA
CGAGCTGTTGGCGAACGCCCCGGCAGATAGGGCGTGGCGCCGCCGGGGCT
TGCTGGTCTTGTGCCGTGCTTGGCTCCGGAGGTCG
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