mRNA_Ecto-sp8_S_contig9445.30970.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A6H5KIJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIJ3_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 2.250e-157 Identity = 248/314 (78.98%), Postives = 256/314 (81.53%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAES---GARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMW+HRRWFAGKRVVELGAGLGLCG+LASKLCTGGTVVITDGGEEFT++A+DALRANL+KNSCNLLA SPARNGSNAAVG A + GARVALEKLTWGEHEAFL RNGGGSDRTTDGVND D+ RGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPS SSSLR QASA TESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR
Sbjct: 69 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGILASKLCTGGTVVITDGGEEFTNSAMDALRANLIKNSCNLLAHSPARNGSNAAVGCGGDAAAVGAAAAGRGARVALEKLTWGEHEAFLERNGGGSDRTTDGVNDGDN---RGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSPSHEAVAPKDETEEQDPPQPESSGPASSSSLRCQASAPPALPSLVPAPTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 379
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A836C7F5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F5_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.920e-35 Identity = 90/201 (44.78%), Postives = 119/201 (59.20%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGER 605
V + L+GV+PELGQTLASTGLTVW AA+ +A +++ R A + V+ELGAGLGLCG+L +KL GG+VV+TDGG+EFTD AL AL + +N R+ + AA A+E+LTWG+H+AFL+ H+EG FD V+AADVIYE E V PLL TV +L+ + R
Sbjct: 74 VTVELSGVSPELGQTLASTGLTVWTAARHLAHYLFHIRDQIAARTVIELGAGLGLCGILCAKL--GGSVVVTDGGDEFTDEALGALVEQVERN----------RSVTAAAF---------------ECAVERLTWGDHDAFLKA----------------HREG---FDVVIAADVIYEAEAVVPLLSTVTALLQAKPRAR 228
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: W7TPS1_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPS1_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.190e-25 Identity = 91/321 (28.35%), Postives = 131/321 (40.81%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWF-----AGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR*RGSG 950
V + L G ELGQ L TGLT+WRA +++ R++W++R +R++ELG GLGLCG++A++L G VV+TDG + N +KN C VA L WGE++ + E + GFD V+AADVIYEE+ + PLL TV LR G+ ++ FLL++ARRN+SI+RVL A S+GL V D F ++ E++Y M L+ + G
Sbjct: 65 VRVRLHGWKKELGQQLECTGLTMWRAGEDLGRYLWENRAMLFKQGQGRQRILELGCGLGLCGLVAAQLNPKGVVVLTDGDALTMQKVCRNIDENSLKNRCC-------------------------------VAARTLQWGENKKII-------------------SEFKEGFDLVLAADVIYEEKAIGPLLSTVT--ATLRKGQ-------------------------------------------------------------DALFLLSYARRNVSIDRVLAAASSMGLTCEVDDKFSCSAEGEHVYRMRLQRKEEG 272
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A7S3MJ79_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MJ79_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.790e-20 Identity = 95/294 (32.31%), Postives = 118/294 (40.14%), Query Frame = 3
Query: 15 LAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLC---TGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDD 887
L G+ ELGQTL STGLT+WRAA+ + +F+ + +F GK + ELGAGLGL VL KL +GG++VITDG E L L N V N C ES L WGE+E FL D+ F+ V+AADVIYE+ V PLL TV ILR PD F+LAFARRN+SI++V AE GL WR+ D+
Sbjct: 78 LKGIKKELGQTLDSTGLTIWRAAEHLCQFIIDNPPFFRGKTICELGAGLGLVAVLIEKLGYVESGGSLVITDGDEP----TLQLLIENKVDNECFF-------------------------ES------SYLYWGENEDFLSS-----------YPDK--------FEVVIAADVIYEDCQVEPLLDTVAAILR-----------PD------------------------------------------------------GEFILAFARRNVSIDKVHRAAEQRGLEWRIVDE 252
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: M4BI17_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI17_HYAAE) HSP 1 Score: 97.8 bits (242), Expect = 6.820e-19 Identity = 92/310 (29.68%), Postives = 122/310 (39.35%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSL 932
+ I L G+ ++GQTL STGLT+WRA ++ +M++HR FAGK V+ELG+GLGL G+LAS L T VVITDG ++ + + + N V+ RV KL WG D VND+ FD V+ ADVIYE+E V+ L T +L+ P C S+ A S FLLA+ +RN+SI+ VL A S G W P E IY L
Sbjct: 100 IFIRLNGLRRDIGQTLQSTGLTLWRAGDFLSSYMYEHRGRFAGKSVIELGSGLGLIGILASYL-TDVQVVITDGDDDTIELLVANCQLNKVEE---------------------------------RVQCRKLLWGVD--------------LDHVNDK--------FDIVLGADVIYEQEHVASLFETAKHLLK-----------PGRC-------------------------------SVDGSCKAA------------SEFLLAYTKRNVSIDYVLETATSFGFEWEEP------LTDEGIYTFRL 293
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A0P1AJ66_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ66_PLAHL) HSP 1 Score: 96.3 bits (238), Expect = 1.380e-18 Identity = 89/312 (28.53%), Postives = 124/312 (39.74%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDIL-RLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
+ I L G+ ++GQTL STGLT+WRA ++ +M+Q+R FAGK ++ELG+GLGL G+LAS L T VVITDG ++ + L + N V+N RV KL W D + ++D+ FD VV AD+IYE+E V L +T +L R R E +SK S FLLA+ +RN+SI+ VL A+S W P E +Y L+
Sbjct: 72 IIIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYQNRDQFAGKSIIELGSGLGLIGILASYL-TDKKVVITDGDDKTIELLLANCKLNGVEN---------------------------------RVQCRKLLW--------------DVDLEQISDK--------FDIVVGADIIYEQEHVVSLFKTANYLLKRGRCSENLESK-------------------------------------------------------VTSEFLLAYTKRNVSIDYVLDVAQSFDFEWNEP------IGDEGVYTFRLK 266
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: G4YRN5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YRN5_PHYSP) HSP 1 Score: 95.1 bits (235), Expect = 3.450e-18 Identity = 84/297 (28.28%), Postives = 119/297 (40.07%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFE 893
+ I L G+ ++GQTL STGLT+WRA ++ FM+Q+R FAGK V+ELG+GLGL G+LAS L T V+ITDG ++ + + + N V++ RV +KL WG D + D+ FD ++ AD+IYE+E V L T +L+ G RS S FLLA+ +RN+SI+ VL A+S G W P + E
Sbjct: 72 ITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDFMYQNRGRFAGKSVIELGSGLGLIGILASYL-TDEQVLITDGDDDTIELLVANCKLNEVED---------------------------------RVQCQKLLWGVD--------------LDKIQDK--------FDIILGADIIYEQEHVVSLFETAKYLLK--PGRRSGED----------------------------------------------------GGKAASEFLLAYTKRNVSIDYVLNTAKSFGFEWEEPTNDE 258
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A7S4VLM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLM9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.090e-18 Identity = 86/317 (27.13%), Postives = 136/317 (42.90%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKN-SC-NLLAQSPARNGSNAAVGXXXXXXXXXAES-----GARVALEKLTWGEH-----------------EAFLRRNGGGSDRT-TDGVND--EDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAW 872
+ I L G+ E GQ L STGLT+W A+ + RF+ + GK V+ELGAGLGLCG+LA K+ V++TDG + L LR+N+ N C N++++S + + + ++ G VA+ +L WG H F ++G D T ++D +D+ + G D ++ +D+IY EE + PL TVV ++ + + + + + PS S FLLA+ RRN+SI+ VL A+ L+W
Sbjct: 120 ITITLRGIKAENGQLLHSTGLTLWNASHLLCRFLSLNPFLIRGKSVIELGAGLGLCGILAHKIGAQ-NVILTDGDSD----VLKELRSNVKSNVDCSNVISESSFSSSATKSRIHNNNHPSSSTDNVWTCNGKNVAVSQLRWGRHGDIDSIPKKWFSRFSINSTFFAKDGNEIDTTMAQHIDDRRDDNDDDFIGLDVIMGSDIIYTEEVLEPLFDTVVQLMMISSSNKEEDGEKELSPS--------------------------------------------------SLFLLAYTRRNVSIDLVLECAKRHNLSW 381
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A662YF07_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF07_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.620e-18 Identity = 87/311 (27.97%), Postives = 121/311 (38.91%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
V I L G+ ++GQTL STGLT+WRA ++ +M+ +R F GK VVELG+GLGLCG+LAS L T VVITDG ++ + + + N V + +V KL WG ++ FD V+ AD+IYE+E V L +T +LR P H +S+ A S FLLA+ +RN+SI+ VL A S G W P + E +Y L+
Sbjct: 71 VTIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYANRATFVGKSVVELGSGLGLCGILASYL-TDKRVVITDGDDDTVELLVANCKLNDVAD---------------------------------KVECRKLLWGVDLEQIQHK----------------------FDIVLGADIIYEQEHVVSLFQTAQYLLR-----------PGH-------------------------------TSVEGGGQAA------------SVFLLAYTKRNVSIDYVLDTATSFGFEWEEP------TTDEGVYTYRLK 265
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A833WMX4_PHYIN (Lysine methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A833WMX4_PHYIN) HSP 1 Score: 92.0 bits (227), Expect = 3.950e-17 Identity = 90/297 (30.30%), Postives = 119/297 (40.07%), Query Frame = 3
Query: 3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFE 893
+ I L G+ ++GQTL STGLT+WRA ++ +M+Q R FAGK ++ELG+GLGL G+LAS L T VVITDG ++ ++ L AN C L NG G RV KL WG D ED FD V+ AD+IYE+E V L +T +L+ G RS S FLLA+ +RN+SI+ VL A+ G W P + E
Sbjct: 72 ITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSEYMYQDRGRFAGKSIIELGSGLGLIGILASYL-TDKKVVITDGDDD----TIELLVAN-----CKL-------NGV-----------------GDRVECRKLLWG----------------VDLHQIEDK------FDVVLGADIIYEQEHVVSLFKTAKYLLK--PGRRSVGN----------------------------------------------------GGKAASEFLLAYTKRNVSIDYVLDTAKGFGFEWEEPTNDE 258 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig9445.30970.1 >prot_Ecto-sp8_S_contig9445.30970.1 ID=prot_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=283bp MARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTback to top mRNA from alignment at Ecto-sp8_S_contig9445:3719..7208- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig9445.30970.1 ID=mRNA_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3490bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9445:3719..7208- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9445:3719..7208- >mRNA_Ecto-sp8_S_contig9445.30970.1 ID=mRNA_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9445:3719..7208- (Ectocarpus species8 EcLAC_412)back to top |