mRNA_Ecto-sp8_S_contig9445.30970.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9445.30970.1
Unique NamemRNA_Ecto-sp8_S_contig9445.30970.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A6H5KIJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIJ3_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 2.250e-157
Identity = 248/314 (78.98%), Postives = 256/314 (81.53%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAES---GARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
            VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMW+HRRWFAGKRVVELGAGLGLCG+LASKLCTGGTVVITDGGEEFT++A+DALRANL+KNSCNLLA SPARNGSNAAVG         A +   GARVALEKLTWGEHEAFL RNGGGSDRTTDGVND D+   RGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPS                           SSSLR QASA           TESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR
Sbjct:   69 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGILASKLCTGGTVVITDGGEEFTNSAMDALRANLIKNSCNLLAHSPARNGSNAAVGCGGDAAAVGAAAAGRGARVALEKLTWGEHEAFLERNGGGSDRTTDGVNDGDN---RGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSPSHEAVAPKDETEEQDPPQPESSGPASSSSLRCQASAPPALPSLVPAPTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 379          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A836C7F5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.920e-35
Identity = 90/201 (44.78%), Postives = 119/201 (59.20%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGER 605
            V + L+GV+PELGQTLASTGLTVW AA+ +A +++  R   A + V+ELGAGLGLCG+L +KL  GG+VV+TDGG+EFTD AL AL   + +N          R+ + AA                  A+E+LTWG+H+AFL+                 H+EG   FD V+AADVIYE E V PLL TV  +L+ +   R
Sbjct:   74 VTVELSGVSPELGQTLASTGLTVWTAARHLAHYLFHIRDQIAARTVIELGAGLGLCGILCAKL--GGSVVVTDGGDEFTDEALGALVEQVERN----------RSVTAAAF---------------ECAVERLTWGDHDAFLKA----------------HREG---FDVVIAADVIYEAEAVVPLLSTVTALLQAKPRAR 228          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: W7TPS1_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPS1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.190e-25
Identity = 91/321 (28.35%), Postives = 131/321 (40.81%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWF-----AGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR*RGSG 950
            V + L G   ELGQ L  TGLT+WRA +++ R++W++R          +R++ELG GLGLCG++A++L   G VV+TDG           +  N +KN C                                VA   L WGE++  +                    E + GFD V+AADVIYEE+ + PLL TV     LR G+                                                             ++ FLL++ARRN+SI+RVL  A S+GL   V D F  ++  E++Y M L+ +  G
Sbjct:   65 VRVRLHGWKKELGQQLECTGLTMWRAGEDLGRYLWENRAMLFKQGQGRQRILELGCGLGLCGLVAAQLNPKGVVVLTDGDALTMQKVCRNIDENSLKNRCC-------------------------------VAARTLQWGENKKII-------------------SEFKEGFDLVLAADVIYEEKAIGPLLSTVT--ATLRKGQ-------------------------------------------------------------DALFLLSYARRNVSIDRVLAAASSMGLTCEVDDKFSCSAEGEHVYRMRLQRKEEG 272          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A7S3MJ79_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MJ79_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.790e-20
Identity = 95/294 (32.31%), Postives = 118/294 (40.14%), Query Frame = 3
Query:   15 LAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLC---TGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDD 887
            L G+  ELGQTL STGLT+WRAA+ + +F+  +  +F GK + ELGAGLGL  VL  KL    +GG++VITDG E      L  L  N V N C                           ES        L WGE+E FL               D+        F+ V+AADVIYE+  V PLL TV  ILR           PD                                                        F+LAFARRN+SI++V   AE  GL WR+ D+
Sbjct:   78 LKGIKKELGQTLDSTGLTIWRAAEHLCQFIIDNPPFFRGKTICELGAGLGLVAVLIEKLGYVESGGSLVITDGDEP----TLQLLIENKVDNECFF-------------------------ES------SYLYWGENEDFLSS-----------YPDK--------FEVVIAADVIYEDCQVEPLLDTVAAILR-----------PD------------------------------------------------------GEFILAFARRNVSIDKVHRAAEQRGLEWRIVDE 252          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: M4BI17_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI17_HYAAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.820e-19
Identity = 92/310 (29.68%), Postives = 122/310 (39.35%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSL 932
            + I L G+  ++GQTL STGLT+WRA   ++ +M++HR  FAGK V+ELG+GLGL G+LAS L T   VVITDG ++  +  +   + N V+                                  RV   KL WG                 D VND+        FD V+ ADVIYE+E V+ L  T   +L+           P  C                               S+     A             S FLLA+ +RN+SI+ VL  A S G  W  P         E IY   L
Sbjct:  100 IFIRLNGLRRDIGQTLQSTGLTLWRAGDFLSSYMYEHRGRFAGKSVIELGSGLGLIGILASYL-TDVQVVITDGDDDTIELLVANCQLNKVEE---------------------------------RVQCRKLLWGVD--------------LDHVNDK--------FDIVLGADVIYEQEHVASLFETAKHLLK-----------PGRC-------------------------------SVDGSCKAA------------SEFLLAYTKRNVSIDYVLETATSFGFEWEEP------LTDEGIYTFRL 293          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A0P1AJ66_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ66_PLAHL)

HSP 1 Score: 96.3 bits (238), Expect = 1.380e-18
Identity = 89/312 (28.53%), Postives = 124/312 (39.74%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDIL-RLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
            + I L G+  ++GQTL STGLT+WRA   ++ +M+Q+R  FAGK ++ELG+GLGL G+LAS L T   VVITDG ++  +  L   + N V+N                                 RV   KL W              D   + ++D+        FD VV AD+IYE+E V  L +T   +L R R  E  +SK                                                         S FLLA+ +RN+SI+ VL  A+S    W  P         E +Y   L+
Sbjct:   72 IIIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYQNRDQFAGKSIIELGSGLGLIGILASYL-TDKKVVITDGDDKTIELLLANCKLNGVEN---------------------------------RVQCRKLLW--------------DVDLEQISDK--------FDIVVGADIIYEQEHVVSLFKTANYLLKRGRCSENLESK-------------------------------------------------------VTSEFLLAYTKRNVSIDYVLDVAQSFDFEWNEP------IGDEGVYTFRLK 266          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: G4YRN5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YRN5_PHYSP)

HSP 1 Score: 95.1 bits (235), Expect = 3.450e-18
Identity = 84/297 (28.28%), Postives = 119/297 (40.07%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFE 893
            + I L G+  ++GQTL STGLT+WRA   ++ FM+Q+R  FAGK V+ELG+GLGL G+LAS L T   V+ITDG ++  +  +   + N V++                                 RV  +KL WG                 D + D+        FD ++ AD+IYE+E V  L  T   +L+   G RS                                                            S FLLA+ +RN+SI+ VL  A+S G  W  P + E
Sbjct:   72 ITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDFMYQNRGRFAGKSVIELGSGLGLIGILASYL-TDEQVLITDGDDDTIELLVANCKLNEVED---------------------------------RVQCQKLLWGVD--------------LDKIQDK--------FDIILGADIIYEQEHVVSLFETAKYLLK--PGRRSGED----------------------------------------------------GGKAASEFLLAYTKRNVSIDYVLNTAKSFGFEWEEPTNDE 258          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A7S4VLM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLM9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.090e-18
Identity = 86/317 (27.13%), Postives = 136/317 (42.90%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKN-SC-NLLAQSPARNGSNAAVGXXXXXXXXXAES-----GARVALEKLTWGEH-----------------EAFLRRNGGGSDRT-TDGVND--EDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAW 872
            + I L G+  E GQ L STGLT+W A+  + RF+  +     GK V+ELGAGLGLCG+LA K+     V++TDG  +     L  LR+N+  N  C N++++S   + +  +            ++     G  VA+ +L WG H                   F  ++G   D T    ++D  +D+ +   G D ++ +D+IY EE + PL  TVV ++ + +  + +    +  PS                                                  S FLLA+ RRN+SI+ VL  A+   L+W
Sbjct:  120 ITITLRGIKAENGQLLHSTGLTLWNASHLLCRFLSLNPFLIRGKSVIELGAGLGLCGILAHKIGAQ-NVILTDGDSD----VLKELRSNVKSNVDCSNVISESSFSSSATKSRIHNNNHPSSSTDNVWTCNGKNVAVSQLRWGRHGDIDSIPKKWFSRFSINSTFFAKDGNEIDTTMAQHIDDRRDDNDDDFIGLDVIMGSDIIYTEEVLEPLFDTVVQLMMISSSNKEEDGEKELSPS--------------------------------------------------SLFLLAYTRRNVSIDLVLECAKRHNLSW 381          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A662YF07_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF07_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.620e-18
Identity = 87/311 (27.97%), Postives = 121/311 (38.91%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 935
            V I L G+  ++GQTL STGLT+WRA   ++ +M+ +R  F GK VVELG+GLGLCG+LAS L T   VVITDG ++  +  +   + N V +                                 +V   KL WG     ++                        FD V+ AD+IYE+E V  L +T   +LR           P H                               +S+     A             S FLLA+ +RN+SI+ VL  A S G  W  P      +  E +Y   L+
Sbjct:   71 VTIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYANRATFVGKSVVELGSGLGLCGILASYL-TDKRVVITDGDDDTVELLVANCKLNDVAD---------------------------------KVECRKLLWGVDLEQIQHK----------------------FDIVLGADIIYEQEHVVSLFQTAQYLLR-----------PGH-------------------------------TSVEGGGQAA------------SVFLLAYTKRNVSIDYVLDTATSFGFEWEEP------TTDEGVYTYRLK 265          
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Match: A0A833WMX4_PHYIN (Lysine methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A833WMX4_PHYIN)

HSP 1 Score: 92.0 bits (227), Expect = 3.950e-17
Identity = 90/297 (30.30%), Postives = 119/297 (40.07%), Query Frame = 3
Query:    3 VCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFTDAALDALRANLVKNSCNLLAQSPARNGSNAAVGXXXXXXXXXAESGARVALEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLRFQASAXXXXXXXXXXXTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFE 893
            + I L G+  ++GQTL STGLT+WRA   ++ +M+Q R  FAGK ++ELG+GLGL G+LAS L T   VVITDG ++     ++ L AN     C L       NG                  G RV   KL WG                 D    ED       FD V+ AD+IYE+E V  L +T   +L+   G RS                                                            S FLLA+ +RN+SI+ VL  A+  G  W  P + E
Sbjct:   72 ITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSEYMYQDRGRFAGKSIIELGSGLGLIGILASYL-TDKKVVITDGDDD----TIELLVAN-----CKL-------NGV-----------------GDRVECRKLLWG----------------VDLHQIEDK------FDVVLGADIIYEQEHVVSLFKTAKYLLK--PGRRSVGN----------------------------------------------------GGKAASEFLLAYTKRNVSIDYVLDTAKGFGFEWEEPTNDE 258          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9445.30970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIJ3_9PHAE2.250e-15778.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7F5_9STRA2.920e-3544.78Putative methyltransferase-domain-containing prote... [more]
W7TPS1_9STRA5.190e-2528.35Nicotinamide N-methyltransferase, putative n=1 Tax... [more]
A0A7S3MJ79_9STRA3.790e-2032.31Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
M4BI17_HYAAE6.820e-1929.68Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0P1AJ66_PLAHL1.380e-1828.53Predicted methyltransferase n=1 Tax=Plasmopara hal... [more]
G4YRN5_PHYSP3.450e-1828.28Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S4VLM9_9STRA8.090e-1827.13Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A662YF07_9STRA8.620e-1827.97Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A833WMX4_PHYIN3.950e-1730.30Lysine methyltransferase n=16 Tax=Phytophthora Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9445contigEcto-sp8_S_contig9445:3719..7208 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score417.9
Seed ortholog evalue3.7e-114
Seed eggNOG ortholog2880.D8LKR9
Model size1688
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2497@1,KOG2497@2759
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-07_004540.1
Cds size849
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9445.30970.1prot_Ecto-sp8_S_contig9445.30970.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9445 4469..7119 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145302.1219172-UTR-Ecto-sp8_S_contig9445:3718..44681681145302.1219172-UTR-Ecto-sp8_S_contig9445:3718..4468Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9445 3719..4468 -
1681145302.2052326-UTR-Ecto-sp8_S_contig9445:7119..72081681145302.2052326-UTR-Ecto-sp8_S_contig9445:7119..7208Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9445 7120..7208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145302.1358073-CDS-Ecto-sp8_S_contig9445:4468..48721681145302.1358073-CDS-Ecto-sp8_S_contig9445:4468..4872Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9445 4469..4872 -
1681145302.147926-CDS-Ecto-sp8_S_contig9445:5752..60801681145302.147926-CDS-Ecto-sp8_S_contig9445:5752..6080Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9445 5753..6080 -
1681145302.1599534-CDS-Ecto-sp8_S_contig9445:6514..66051681145302.1599534-CDS-Ecto-sp8_S_contig9445:6514..6605Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9445 6515..6605 -
1681145302.1852705-CDS-Ecto-sp8_S_contig9445:7093..71191681145302.1852705-CDS-Ecto-sp8_S_contig9445:7093..7119Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9445 7094..7119 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9445.30970.1

>prot_Ecto-sp8_S_contig9445.30970.1 ID=prot_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=283bp
MARFMWQHRRWFAGKRVVELGAGLGLCGVLASKLCTGGTVVITDGGEEFT
DAALDALRANLVKNSCNLLAQSPARNGSNAAVGGGDAAAAAAAESGARVA
LEKLTWGEHEAFLRRNGGGSDRTTDGVNDEDHQEGRGGFDFVVAADVIYE
EEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSPSPAAAAPKDETEEQDP
PQPESSGPAPSSSLRFQASAPPAPPSLSPAPTESTFLLAFARRNISIERV
LGEAESLGLAWRVPDDFEPASASENIYLMSLR*
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mRNA from alignment at Ecto-sp8_S_contig9445:3719..7208-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9445.30970.1 ID=mRNA_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3490bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9445:3719..7208- (Ectocarpus species8 EcLAC_412)
AGGTTTGCATTGCCCTGGCTGGCGTCAACCCGGAGCTGGGACAGACGCTG GCCAGCACCGGGCTGACGGTGTGGAGGGCCGCCCAGGAGATGGCCCGCTT CATGTGGCAGCACAGGTATCTGACACCCATGCGTTTTTTTTTTGCCAGCC TCTCAAGCAGATACTGGGGAATGATCTTTACACTGGAAAAGGTTGTGGGC GAGTATTTTCGGTGACGGTGTTAGCTTAGGATGTGTCTCTGACACTCATC GCATACCATACAAGGGGAGCAGAGGAGGCGATGCACCTTGTGTACGGAAG CAGGCGAGGTCATCTTGATGTTTTCGGTTTCAGGACGGGACGACAGGGCC ATCACCTGGGGAGCTGTTATTGACGGGCGTGCGCAGCAGCACGTTTAGGT ACTCGGGATTGGCCGCCACTTTGGACTACACTCACACCATTGGCAAGCGT GCCAGCACCTGCAGACATGAGAATCGCCGTAGCACCACTTTTGGTTTTGT TCACCGATCAACAGCGACTCAACCCCAACCGCCCCTGCTTCTTTTGCCTT CATGGCATCCCGCTGAAATGACGGGTTGTCGCCTCATCCTGCGCTTTGCG CAGACGGTGGTTCGCAGGCAAACGGGTGGTCGAGCTAGGTGCGGGGTTGG GACTGTGCGGCGTTCTTGCGTCCAAGCTGTGCACCGGCGGAACGGTAGGC GTTGTCGTGCAAGTTTGCTAACGCTGTATGAGATGCTTATCGCTTGCGTG CTGCATGTTGTTCGTTTCCTCTCCGCGGCATCTGTCGAGTAGTAGCCGCG GCCGCGGGCATGAATCTTCACACAGAGCAGTGTCGCTTGGCTGCATTCGA CCGGGGAGAAGGGTTTATTCTGCTCTTGCGGTGTGGTGTAATCGCACGTT GTGTCGACGTGGTTGAAGCTCTCCGATCTGCGTCGTATTCCCTTTTCTTC GCATCGTTCTCGGTTGTATATATATAGATATTTGTTTTTTTATGAAGATG ATGTTCGAATGCCTCGATACACCTAGTCAGCGGGAGGGTCATCGGCTAGC TCGAGGCTGTTCTCTGTCAACCGTGCCCAGGTAAACACAGCTGGACCAAT CGTTTGCCCATGCCGTGACGTGGCATAGGTCGTGATAACGGACGGTGGAG AGGAGTTCACAGACGCGGCCCTGGATGCACTCAGAGCAAACTTGGTAAAG AACTCGTGTAACCTGCTGGCCCAGTCGCCGGCGAGAAACGGCAGCAATGC TGCCGTTGGTGGTGGTGATGCTGCTGCTGCGGCGGCGGCCGAGAGTGGGG CGCGGGTGGCGTTGGAGAAGCTAACGTGGGGAGAGCACGAGGCTTTCTTG CGGCGGAACGGGGGTGGAAGCGACCGAACCACCGACGGCGTCAATGACGA AGATCACCAAGAAGGGCGGGGAGGGTTCGACTTCGTCGTAGCGGCCGATG TTATATGTGAGAAACCATGGACACCGAACGTATCTCGTTGTCCCGCATCG TGATTGGCATGGCTACACACTTCCTGTGACGTTGCCGAGGCCGAGCTGTT TCTGAGGGCGGTGGAGATTGTGGATATGGTGTTCCGCCATGTAGAACGGG AATAGGCCCAAGTGGATGGCGCGGGTTGGGGAATTTGGAGACACACACAA GAAGAGAAAGGGGGATACTTCTATTATTTTTGGTGTTTTTTTACCACGGT CGATAACATGGCGTCATGTTTTTTTCTCTCGTGCACACACACTCGCTTGC TGTATGATTAAAAGGACTCGGTCGACGACTGCCAGGCTTGGTTTCGCAAC ACCAACTTGAATGTGATCGTGGCTCCAACGCTATGAAACAGCGTTGTAAA ATACGGTATACGCTCGCGTCCGCCCCATATCATAGTTATCGACGACGGGG CAGGCGGTGATGTCCCACGACAAGTTTTTCATATTTTTGCAGGAACTGTT CTTGTCGGCGCGCTCATCTAGAGGCGGCGACCCCAAAGCGGGAGATACCG TGCAGTGTACGTGGCTCGAAAGACGCTCTTCTTGCGCGTGCACTGTGGAG GCTCTCTCTCTCGTCTCCGTGCGTCATGCTTCCGTTGTCGGCCCTGGATC CTGGCAATGAAATCATGGATGGCGCGGCCATGGACACAGTACTTTGTCTG GGAGAACCCTCACGTTTACGCTTTCTCGCGTCATTTGAAGGTTTGCGATT TGAGGTTTTGCGTGCGAAGAAGGGCTAGATGAAGAAATGGTATCTGGCTG TACCGACTTGGACCGCCGCGCGCATCGTCCCGTTTTCACTCTCTCCCACG TTTGGCAAAACTTTCGTGACGAAACAAATCCACCAGACGAGGAAGAAGGG GTCAGCCCGCTGCTGCGCACCGTGGTTGACATTCTCAGGCTGAGAGCAGG AGAGCGCAGCGACAGCAAGCACCCCGACCACTGCCCCAGCCCTTCTCCGG CGGCAGCGGCACCGAAAGACGAGACTGAGGAGCAAGACCCGCCGCAGCCC GAGTCGTCAGGGCCAGCACCGTCGTCTTCTCTCCGATTCCAAGCCTCGGC ACCTCCGGCGCCGCCATCCCTTTCTCCTGCTCCGACGGAGTCGACGTTTT TGCTGGCCTTCGCCCGGCGCAACATTTCGATCGAACGCGTCCTGGGGGAG GCGGAGAGCCTCGGCCTCGCGTGGAGGGTGCCCGATGACTTCGAACCCGC CAGCGCCTCCGAGAATATTTATCTCATGAGTCTTCGGTGACGGGGGTCGG GGCGGCCGTTGGTTCGATGCTTGCGAGACAGCGGGAAGGGTTCTACTCTA CGGTTGTGGTTGCGTGTGGCGTAGGTGCTTGGTTGGTGAAGAAATGTTGT TGTTTTGTTGTTGTCCTCGTCTTGCCTCGATTACTATTGTTGAAGCAGTT TGCTAGTTCTGCGTACTGTATCGTTGGTTGGGTGACACAGGTTTGAAATC CCGTAATAGTTGTTGGGTCGTGTATTGTATTACATGGGTGCTCACGAGAG AGCTGGTGGACACAACCACTGAGGTACTGCCGTAATGGCAACATGACGTA ACTGGTCCGTGCGGCACCGCTTTCGCCGTGCCTCGGCGACGAGTCTTCTT TGGCCACTGAACGGGTTCGTGATGTGTATAGGCATGACCCCCTGGGTAGA TGGTGTCAGACGTTAGCCGAAGTTGTCTATACTCTGCTCCGGTTGCGGCC AAGCAACAACCACCGTTCGTTTCTGCGGCTGTAGTGGTGCTTGAAATGCA GGGATATAGGAAGGCGGTGTGCTGAACACTGGTGGCCCTCCTATTTGATT GAAATCTTGAATGCATCGCTAGGCTGTGGCCGTCCGGGTAGACCTTTTTT TATCGGCAACGAACGAATGCTACACATTTCTGAGTCCGTCAAATGCATTG ATGAGAAGGTTTTTGCAGGACGGGGAGGACCAGTGCCCGTCGTGTAGTTG ATTGAATCTTATGAAAATAATGAAAACACATGTAGCCAGG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9445:3719..7208-

>mRNA_Ecto-sp8_S_contig9445.30970.1 ID=mRNA_Ecto-sp8_S_contig9445.30970.1|Name=mRNA_Ecto-sp8_S_contig9445.30970.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9445:3719..7208- (Ectocarpus species8 EcLAC_412)
ATGGCCCGCTTCATGTGGCAGCACAGACGGTGGTTCGCAGGCAAACGGGT
GGTCGAGCTAGGTGCGGGGTTGGGACTGTGCGGCGTTCTTGCGTCCAAGC
TGTGCACCGGCGGAACGGTCGTGATAACGGACGGTGGAGAGGAGTTCACA
GACGCGGCCCTGGATGCACTCAGAGCAAACTTGGTAAAGAACTCGTGTAA
CCTGCTGGCCCAGTCGCCGGCGAGAAACGGCAGCAATGCTGCCGTTGGTG
GTGGTGATGCTGCTGCTGCGGCGGCGGCCGAGAGTGGGGCGCGGGTGGCG
TTGGAGAAGCTAACGTGGGGAGAGCACGAGGCTTTCTTGCGGCGGAACGG
GGGTGGAAGCGACCGAACCACCGACGGCGTCAATGACGAAGATCACCAAG
AAGGGCGGGGAGGGTTCGACTTCGTCGTAGCGGCCGATGTTATATACGAG
GAAGAAGGGGTCAGCCCGCTGCTGCGCACCGTGGTTGACATTCTCAGGCT
GAGAGCAGGAGAGCGCAGCGACAGCAAGCACCCCGACCACTGCCCCAGCC
CTTCTCCGGCGGCAGCGGCACCGAAAGACGAGACTGAGGAGCAAGACCCG
CCGCAGCCCGAGTCGTCAGGGCCAGCACCGTCGTCTTCTCTCCGATTCCA
AGCCTCGGCACCTCCGGCGCCGCCATCCCTTTCTCCTGCTCCGACGGAGT
CGACGTTTTTGCTGGCCTTCGCCCGGCGCAACATTTCGATCGAACGCGTC
CTGGGGGAGGCGGAGAGCCTCGGCCTCGCGTGGAGGGTGCCCGATGACTT
CGAACCCGCCAGCGCCTCCGAGAATATTTATCTCATGAGTCTTCGGTGA
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