mRNA_Ecto-sp8_S_contig11183.1545.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig11183.1545.1
Unique NamemRNA_Ecto-sp8_S_contig11183.1545.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: D7FKF0_ECTSI (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF0_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.910e-111
Identity = 175/183 (95.63%), Postives = 176/183 (96.17%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            WANLR+LQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLK       GTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH
Sbjct:  351 WANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLK-------GTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 526
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: A0A6H5KVD1_9PHAE (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD1_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.010e-90
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAF 438
            WANLR+LQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAG  +
Sbjct:  326 WANLRALQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGDGY 471
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: A0A836CA96_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA96_9STRA)

HSP 1 Score: 250 bits (638), Expect = 7.840e-78
Identity = 131/187 (70.05%), Postives = 150/187 (80.21%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCF----DKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            WANLR++QRLVAK+E+ L+V V ER VSG +TIQLET    A+ CF     KV+A  V R+RYLPVKSTSDLFLVQSNLY ++HG+LVMS ERP   TPLIKLG+EF+ VED+L RIPHGVP I +LDHLTVAGDV FG N+TLK       GTVIIVANEGS+IMIPDGTVL+D VVTGNLRILDH
Sbjct:  342 WANLRAIQRLVAKDELHLDVAVHERVVSGTRTIQLETFAGGAMWCFAAHGHKVLACTVPRSRYLPVKSTSDLFLVQSNLYSIKHGNLVMSPERPFRMTPLIKLGQEFSHVEDFLVRIPHGVPNIIELDHLTVAGDVTFGTNITLK-------GTVIIVANEGSIIMIPDGTVLKDKVVTGNLRILDH 521
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: W2PVU9_PHYPN (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVU9_PHYPN)

HSP 1 Score: 204 bits (520), Expect = 1.660e-61
Identity = 104/183 (56.83%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QRLVA++ + +E  V  R V   K +QLET    AI  F   + + V R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   + P++KLG EF S ++YL R  HG+P IT+LDHLTVAGDV FG N+TLK       GTVI+VANEG+ I +PDGTVL + VVTGNLRILDH
Sbjct:  224 WVNLRAIQRLVAQDLIDMEPLVTFRTVRNHKVVQLETAAGEAIHLFKNFIGLKVPRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARTTPTIPIVKLGLEFQSAKEYLARFEHGIPNITELDHLTVAGDVKFGSNITLK-------GTVILVANEGAHIDLPDGTVLENKVVTGNLRILDH 399
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: W7UC11_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC11_9STRA)

HSP 1 Score: 203 bits (516), Expect = 5.830e-60
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERP--DGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR+L  L+ +E++S+++   ER V  LK +QLET   S I+ F  V+ + V R+RYLPVKSTSDLFLVQS+LY V  G L+ +  RP      P+IKLG +F  ++DYL RIP+GVP +  L+HLTVAGDV+FG NVTLK       GTVIIVANEGSVIMIPD TVL D VVTGNLRILDH
Sbjct:  314 WINLRALHALLVEEKLSIDLVTHERVVDRLKILQLETTIGSVIKDFSNVLTMKVPRSRYLPVKSTSDLFLVQSSLYSVSRGMLIPNPGRPYAKDKIPIIKLGEQFVHIQDYLERIPNGVPDLLALEHLTVAGDVVFGANVTLK-------GTVIIVANEGSVIMIPDKTVLEDKVVTGNLRILDH 491
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: K3X633_GLOUD (UTP--glucose-1-phosphate uridylyltransferase n=9 Tax=Oomycota TaxID=4762 RepID=K3X633_GLOUD)

HSP 1 Score: 202 bits (515), Expect = 6.730e-60
Identity = 101/183 (55.19%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QRLVA++ + +E  V  R V  +K +QLET     IQ F   + + V R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  RP  + P++KLG EF S ++Y  R   G+P I +LDHLTVAGDV FG ++TLK       GTVI+VANEG+ I +PDGT+L D VVTGNLRILDH
Sbjct:  307 WVNLRAIQRLVAQDIIDIEPIVSSRTVKSVKVVQLETAAGEGIQFFKNFIGVKVPRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARPIPTIPIVKLGLEFQSAKEYAARFERGIPNIMELDHLTVAGDVKFGSDITLK-------GTVILVANEGAHIDLPDGTILEDKVVTGNLRILDH 482
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: M4BAY1_HYAAE (UTP--glucose-1-phosphate uridylyltransferase n=3 Tax=Peronosporaceae TaxID=4777 RepID=M4BAY1_HYAAE)

HSP 1 Score: 202 bits (515), Expect = 1.060e-59
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QRLVA++ + +E  V  R V   K +QLET    AI  F   + + V+R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   S P++KLG EF SV++YL R  HG+P IT+LDHLTVAGDV FG N+ LK       GTVI+VANEG+ I +P+GTVL + VVTGNLRILDH
Sbjct:  328 WVNLRAIQRLVAQDLIDIEPLVTFRTVKCHKVVQLETAAGEAIHLFKNFIGLKVSRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARITPSIPIVKLGLEFQSVKEYLARFDHGIPDITELDHLTVAGDVKFGSNIKLK-------GTVILVANEGAHIDLPEGTVLENKVVTGNLRILDH 503
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: A0A485LCW4_9STRA (UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCW4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.580e-59
Identity = 101/183 (55.19%), Postives = 129/183 (70.49%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QRLVA++ + +   V  R V   K +QLET    AIQ F   + I V R R+LPVKS+SDLFLVQSNLY ++HGSL+M+ +R   + P++KLGREF + + Y  R  HG+P I +LDHLTVAGDV FG  +TLK       GTVI+VANEG+ I +PDGT+L D VVTG+LRILDH
Sbjct:  290 WVNLRAIQRLVAQDLIDINPIVSYRAVKNNKVVQLETAAGGAIQFFKNFVGIKVTRLRFLPVKSSSDLFLVQSNLYQIKHGSLLMNPDRGLSTIPIVKLGREFQTAQQYSERFEHGIPNILELDHLTVAGDVKFGHGITLK-------GTVILVANEGAKIELPDGTILEDKVVTGDLRILDH 465
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: D0NU40_PHYIT (UTP--glucose-1-phosphate uridylyltransferase n=25 Tax=Peronosporaceae TaxID=4777 RepID=D0NU40_PHYIT)

HSP 1 Score: 197 bits (501), Expect = 7.870e-58
Identity = 101/183 (55.19%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QRLVA++ + +E  V  R V   K +QLET    AI  F   + + V R+R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   + P++KLG +F S ++YL R   G+P IT+LDHLTVAGDV FG N+TLK       GTVI+VANEG+ I +P+GTVL + VVTGNLRILDH
Sbjct:  306 WVNLRAIQRLVAQDLIDMEPLVTFRTVRNHKVVQLETAAGEAIHLFKNFIGLKVPRSRFLPVKSSSDLFLVQSNLYQIKHGSLIMNPARTTPTIPIVKLGLKFQSAKEYLARFELGIPNITELDHLTVAGDVKFGSNITLK-------GTVILVANEGAHIDLPEGTVLENKVVTGNLRILDH 481
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BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Match: A0A067CJP7_SAPPC (UTP--glucose-1-phosphate uridylyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJP7_SAPPC)

HSP 1 Score: 196 bits (499), Expect = 1.100e-57
Identity = 100/183 (54.64%), Postives = 128/183 (69.95%), Query Frame = 1 
Query:    1 WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVMAIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLGREFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGTVIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH 549
            W NLR++QR+VA++ + +   V  R V   K +QLET    AIQ F   + I V R R+LPVKS+SDLFLVQSNLY ++HGSL+M+  R   + P++KLGREF + + Y  R+  G+P I +LDHLTVAGDV FG ++TLK       GTVI+VANEG  I +PDGT+L D VVTGNLRILDH
Sbjct:  290 WVNLRAIQRMVAQDVIDINPIVSYRTVRNHKVVQLETAAGGAIQFFKNFIGIQVPRLRFLPVKSSSDLFLVQSNLYQIKHGSLLMNPSRGLPTIPIVKLGREFQTAQQYAERLERGIPNILELDHLTVAGDVKFGSDITLK-------GTVILVANEGCKIDLPDGTILEDKVVTGNLRILDH 465
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11183.1545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKF0_ECTSI1.910e-11195.63UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A6H5KVD1_9PHAE2.010e-9097.26UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
A0A836CA96_9STRA7.840e-7870.05UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
W2PVU9_PHYPN1.660e-6156.83UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
W7UC11_9STRA5.830e-6058.92UTP--glucose-1-phosphate uridylyltransferase n=2 T... [more]
K3X633_GLOUD6.730e-6055.19UTP--glucose-1-phosphate uridylyltransferase n=9 T... [more]
M4BAY1_HYAAE1.060e-5956.83UTP--glucose-1-phosphate uridylyltransferase n=3 T... [more]
A0A485LCW4_9STRA3.580e-5955.19UTP--glucose-1-phosphate uridylyltransferase n=1 T... [more]
D0NU40_PHYIT7.870e-5855.19UTP--glucose-1-phosphate uridylyltransferase n=25 ... [more]
A0A067CJP7_SAPPC1.100e-5754.64UTP--glucose-1-phosphate uridylyltransferase n=3 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11183contigEcto-sp8_S_contig11183:4337..6229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score334.7
Seed ortholog evalue2.7e-89
Seed eggNOG ortholog2880.D7FKF0
Preferred nameUGP2
Model size552
KEGG rclassRC00002
KEGG koko:K00963,ko:K02987,ko:K17260,ko:K17491
KEGG ReactionR00289
KEGG Pathwayko00040,ko00052,ko00500,ko00520,ko01100,ko01130,ko03010,ko04138,ko04212,ko04530,ko04922,map00040,map00052,map00500,map00520,map01100,map01130,map03010,map04138,map04212,map04530,map04922
KEGG ModuleM00129,M00177,M00179,M00361,M00362,M00549
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0005515,GO:0005536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005985,GO:0005991,GO:0005992,GO:0006011,GO:0006065,GO:0006073,GO:0006077,GO:0006078,GO:0006082,GO:0006091,GO:0006112,GO:0006139,GO:0006464,GO:0006486,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009250,GO:0009267,GO:0009277,GO:0009311,GO:0009312,GO:0009555,GO:0009605,GO:0009628,GO:0009651,GO:0009986,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010494,GO:0010941,GO:0010942,GO:0015980,GO:0016020,GO:0016036,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019103,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0030246,GO:0030312,GO:0030445,GO:0030587,GO:0031154,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0032553,GO:0032557,GO:0032991,GO:0033036,GO:0033037,GO:0033554,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036094,GO:0036211,GO:0036296,GO:0036464,GO:0042221,GO:0042545,GO:0042594,GO:0042802,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043413,GO:0043436,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046351,GO:0046394,GO:0046398,GO:0046483,GO:0046686,GO:0048029,GO:0048229,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051273,GO:0051274,GO:0051641,GO:0051703,GO:0051704,GO:0051716,GO:0051748,GO:0052386,GO:0052543,GO:0052545,GO:0055086,GO:0055093,GO:0055114,GO:0065007,GO:0070085,GO:0070482,GO:0070569,GO:0070727,GO:0071496,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090406,GO:0090702,GO:0097159,GO:0097367,GO:0099120,GO:0120025,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons3
EggNOG free text desc.Utp--glucose-1-phosphate uridylyltransferase
EggNOG OGsCOG4284@1,KOG2638@2759
EC2.7.7.9
Cds size552
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01009,ko03011,ko03400,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143199.2960505-CDS-Ecto-sp8_S_contig11183:4336..44441681143199.2960505-CDS-Ecto-sp8_S_contig11183:4336..4444Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11183 4337..4444 -
1681143199.307619-CDS-Ecto-sp8_S_contig11183:5093..53931681143199.307619-CDS-Ecto-sp8_S_contig11183:5093..5393Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11183 5094..5393 -
1681143199.3159816-CDS-Ecto-sp8_S_contig11183:6085..62291681143199.3159816-CDS-Ecto-sp8_S_contig11183:6085..6229Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig11183 6086..6229 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11183.1545.1prot_Ecto-sp8_S_contig11183.1545.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig11183 4337..6229 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig11183.1545.1

>prot_Ecto-sp8_S_contig11183.1545.1 ID=prot_Ecto-sp8_S_contig11183.1545.1|Name=mRNA_Ecto-sp8_S_contig11183.1545.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=184bp
WANLRSLQRLVAKEEMSLEVNVRERQVSGLKTIQLETCGASAIQCFDKVM
AIVVNRARYLPVKSTSDLFLVQSNLYGVRHGSLVMSAERPDGSTPLIKLG
REFTSVEDYLRRIPHGVPTITQLDHLTVAGDVMFGENVTLKAGGAFLHGT
VIIVANEGSVIMIPDGTVLRDSVVTGNLRILDH*
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mRNA from alignment at Ecto-sp8_S_contig11183:4337..6229-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig11183.1545.1 ID=mRNA_Ecto-sp8_S_contig11183.1545.1|Name=mRNA_Ecto-sp8_S_contig11183.1545.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1893bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11183:4337..6229- (Ectocarpus species8 EcLAC_412)
TGGGCAAACCTGCGCTCGCTGCAACGACTAGTCGCGAAGGAGGAGATGTC
GTTGGAGGTGAACGTGAGGGAGAGGCAGGTCAGCGGGTTGAAGACCATAC
AGCTGGAGACGTGCGGGGCTAGCGCGATCCAGTGTTTCGACAAGGTACTA
CAGTGTACACCAGGTTACAGTTTTGCAGGAACACTGCTGTATCCAATGTA
TGCCGTTACCACTTGATGGTGGGTGGGGATATGCTTCAGTGTTTTTATGT
TTCCATTTCTCATGATGCCTTTGACGCCACCAATTCAGCACTGGTCCTGG
ATGTGTTGTTTGCTTCAGTGCGAAAGCTGTTGATTTTGCTTCCTCCTACA
CAACGTTTTGCTCTCGCACCTGCTAAGTCGAACATCAATTCCTTGAAAAA
AAAATGTGTGGTCTGTGTGCCATTACACGCGTTTTGCATGGGAGGCTAAG
GTAGGCCATTGGAATGTACCGTACATTGTGTAACAACGGGTGTGTGGACT
AGGCGTGAACAGGCGTTTTTCTGCACAACGTTGTACGAAACCGTTTGTTC
CGTAACGGCTATCGTTTTCTTTCGGACACAACACTAGTACGGTACTCCGG
AAGGAGACCGTGTTGAGGGCGTCCAACGAGAAAGACATGAGCCCCCTTTC
CGTCTCGTCCCGCTTCCGTTGCGTTCCGTTCCGTCCCACCCCCTTTCCGT
CCCTTTCCGTCCCATTCCGTCCTGTCCCGCTCCCTTTTCGTCCCGTCTCG
CTCCATTTCCGTCCCGTCTCGCTCCATTTCGTCCCGTCCCGTTCTCTTTC
CCTCCCTATCCGCCCCGTTCCGTCTCTTGGCGCCAGGTTATGGCCATCGT
CGTAAATCGAGCCCGATATTTGCCCGTCAAGTCGACGTCGGACCTCTTCC
TGGTCCAGTCCAACCTGTACGGGGTGCGGCACGGGAGCCTCGTCATGTCG
GCGGAGCGGCCGGACGGCAGCACCCCGCTGATAAAGCTCGGGAGGGAGTT
CACCTCCGTGGAGGACTACTTGCGGAGGATACCACACGGCGTGCCGACCA
TCACGCAGCTTGACCACCTGACGGTGGCGGGGGACGTTATGTTCGGGGAG
AACGTGACGCTAAAGGCGGGTGGTGCATTCTTGCATGTCTGATGCTGGTT
CGCCGTGTTTGGCTCTTTTTTGTTCGAGCGTTTTCCCCGCTGATTTTTCT
GCTGAACGTATGTGTACACAAGGTTTTTGTGCGCGCATTAGTGCGTTGCG
TGTTGGGGAGGGGCTTGCGCCGCGTGGGCCTGCCACAGCACTAACGCTCG
CCGGTTGGCACTTTGTGTGGGAAAGTAAACCTATCCTCGAGCCAACTGCT
GTGGTTTTTGCAGCATAATTGTGCAACATGGCACATACACAGACTCCGCC
TCCGGCGATAGAGTAGCTCGAGCTTGAAAGAACGTTGCCGGGAGAGACCT
CGCGGCTGCCAACTCTCTAGCTCTCACGTGATTCACGTGCGCCGCCTTTT
ATTACCCTTGGTTGCTTTATTTCCCGTCGTCACCACCATGGTCGAGTCAT
TCGCCGACCTCCAATTTGTTTTTTTAAACTAAAATAAAACAAATCTGCAA
ACCACTGCAATAAAAAAATGAAGTTTTGTTTCTGTGTATCTTTATTGTGT
TTTTTGGACCACAAGTCATCTCTTCCATACATGAGAAAGAGTCCGGGATA
GATTGGCAATACATTCATGGTGTGTCTGTTTTTATATCCAACCGTTTATG
TTGTCCCGCGTGCTGCCTCCGCCCGGTCGGTGCAGGGGACGGTCATCATC
GTCGCCAACGAGGGGTCCGTGATCATGATCCCTGACGGGACGGTACTCAG
AGACTCGGTCGTCACCGGGAACTTGCGCATCCTCGATCACTAA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11183:4337..6229-

>mRNA_Ecto-sp8_S_contig11183.1545.1 ID=mRNA_Ecto-sp8_S_contig11183.1545.1|Name=mRNA_Ecto-sp8_S_contig11183.1545.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=552bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11183:4337..6229- (Ectocarpus species8 EcLAC_412)
TGGGCAAACCTGCGCTCGCTGCAACGACTAGTCGCGAAGGAGGAGATGTC
GTTGGAGGTGAACGTGAGGGAGAGGCAGGTCAGCGGGTTGAAGACCATAC
AGCTGGAGACGTGCGGGGCTAGCGCGATCCAGTGTTTCGACAAGGTTATG
GCCATCGTCGTAAATCGAGCCCGATATTTGCCCGTCAAGTCGACGTCGGA
CCTCTTCCTGGTCCAGTCCAACCTGTACGGGGTGCGGCACGGGAGCCTCG
TCATGTCGGCGGAGCGGCCGGACGGCAGCACCCCGCTGATAAAGCTCGGG
AGGGAGTTCACCTCCGTGGAGGACTACTTGCGGAGGATACCACACGGCGT
GCCGACCATCACGCAGCTTGACCACCTGACGGTGGCGGGGGACGTTATGT
TCGGGGAGAACGTGACGCTAAAGGCGGGTGGTGCATTCTTGCATGGGACG
GTCATCATCGTCGCCAACGAGGGGTCCGTGATCATGATCCCTGACGGGAC
GGTACTCAGAGACTCGGTCGTCACCGGGAACTTGCGCATCCTCGATCACT
AA
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