mRNA_Ecto-sp8_S_contig1117.1538.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: D8LQY3_ECTSI (NAD dependent malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY3_ECTSI) HSP 1 Score: 672 bits (1733), Expect = 6.200e-243 Identity = 338/364 (92.86%), Postives = 342/364 (93.96%), Query Frame = 1
Query: 1 RGAAGSSAEAGEGDGEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM--LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDD 1086
RGAAGSSAEAGEG GEVRWRYHLGVPDRRQELPT+VRDLGKPVLLDPLVNKGTAFLWSE ERFHLRGLLPARMVTMEEQ STR+ GSWDKAARDPN EM LFYRVVMDNFAEMA+VVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYL VVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGR + DIRQLRFVVCGAGSAGMGVVQWL KAMEKHGAPPDEAAGGC VDD
Sbjct: 10 RGAAGSSAEAGEGGGEVRWRYHLGVPDRRQELPTFVRDLGKPVLLDPLVNKGTAFLWSEWERFHLRGLLPARMVTMEEQTSTRE-----------GSWDKAARDPNGEMVQLFYRVVMDNFAEMASVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLHVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRSHNDIRQLRFVVCGAGSAGMGVVQWLFKAMEKHGAPPDEAAGGCPVDD 362
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: D8LQY1_ECTSI (Malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY1_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 2.190e-228 Identity = 328/388 (84.54%), Postives = 334/388 (86.08%), Query Frame = 1
Query: 1 RGAAGSSAEAGEGDGEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDS 1089
RGAAGSS EAGE DGEVRWRYH GVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQ + + + GSWDKAARDPNDEM LFYRVVMDNFAEMA+VVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGR FVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAG + D+
Sbjct: 37 RGAAGSSGEAGEDDGEVRWRYHRGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQTA------KVLEEYREGSWDKAARDPNDEMVQAGLTPDNIRKWEYLKGIQGQNETLFYRVVMDNFAEMASVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGR---------FVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGNFWILDA 409
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A097IUF5_9PHAE (Malic enzyme n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUF5_9PHAE) HSP 1 Score: 620 bits (1598), Expect = 1.290e-217 Identity = 310/378 (82.01%), Postives = 325/378 (85.98%), Query Frame = 1
Query: 31 GEGDGEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDS 1089
G GD E+RWRYH GVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTM EQ + + + G+WDKAARDPNDEM LFY V+++NFAEMA+VVYTPTVGWACLNFSRMFR+ARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLR DKSYLG+NQERLEG+EYLQVVDEFVAA KARWPK LIQFEDFRTEYASKLLERYRY+HLCFNDDIQGTAATALAGIYAGLAATGRPY DIR LRFVVCGAGSAGMGVVQWLCKAMEKHGAP DEAAG + D+
Sbjct: 52 GGGDEEIRWRYHRGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMAEQEA------KVLEEYREGAWDKAARDPNDEMVQAGLTPDNIRKWEYLKGIQGQNETLFYSVLVNNFAEMASVVYTPTVGWACLNFSRMFRVARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLREDKSYLGINQERLEGEEYLQVVDEFVAAAKARWPKVLIQFEDFRTEYASKLLERYRYQHLCFNDDIQGTAATALAGIYAGLAATGRPYSDIRHLRFVVCGAGSAGMGVVQWLCKAMEKHGAPADEAAGNFWILDA 423
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A097IUL3_9PHAE (Malic enzyme n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUL3_9PHAE) HSP 1 Score: 608 bits (1567), Expect = 6.940e-213 Identity = 308/386 (79.79%), Postives = 328/386 (84.97%), Query Frame = 1
Query: 16 SSAEAGEGDG---EVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDS 1089
+++EA E DG E RWRY+ GVPDRRQELP YVRDLGKPVLL+PL+NKGTAFLWSERERFHLRGLLP+RMVTMEEQ + + + G+WDKAARDPNDEM LFYRV+MDNFAEMA+VVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPS +VDAIVVTDGSRILGLGDLGMNGMGIS+GKLDLYVAAAGFHPARVLPCVIDVGTNNK+LR DKSYLGLNQERLEGDEYLQVVDEFVAA KARWPK LIQFEDFRTEYASKLLERYRY+HLCFNDDIQGTAATALAGIYAGLAAT RP+ DIR LRFVVCGAGSAGMGVVQWLCKAMEKHGA PDEAAG + D+
Sbjct: 44 TTSEAVEEDGDAEEKRWRYYRGVPDRRQELPVYVRDLGKPVLLNPLLNKGTAFLWSERERFHLRGLLPSRMVTMEEQTA------KVLEEYREGAWDKAARDPNDEMVQAGLTPDNIRKWEYLKGIQGQNETLFYRVLMDNFAEMASVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSQKVDAIVVTDGSRILGLGDLGMNGMGISVGKLDLYVAAAGFHPARVLPCVIDVGTNNKELREDKSYLGLNQERLEGDEYLQVVDEFVAAAKARWPKVLIQFEDFRTEYASKLLERYRYEHLCFNDDIQGTAATALAGIYAGLAATNRPFSDIRHLRFVVCGAGSAGMGVVQWLCKAMEKHGADPDEAAGKFWILDA 423
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A097IUJ4_9PHAE (Malic enzyme n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUJ4_9PHAE) HSP 1 Score: 598 bits (1541), Expect = 6.290e-209 Identity = 305/401 (76.06%), Postives = 325/401 (81.05%), Query Frame = 1
Query: 4 GAAGSSAEAGEGD--------------GEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDS 1089
G+AGS AG D GE RW+Y+ G+PDRRQELPTYVRDLGK VL DPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQ + + F G+WDKAARDPNDEM LF+RV+MDNFAEMA+VVYTPTVGWACLN+SRMFR+ARGMYFS++DRGHM SIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNN+KLR DKSYLGLNQ RLEGDEYLQ+VDEFVAA+KARWPKALIQFEDFRTEYASKLLERYRY HLCFNDDIQGTAATALAGIYAGL+A RPY DIR LRFVVCGAGSAGMGVV WL KAMEKHGA P+EAAG V D+
Sbjct: 42 GSAGSPTAAGADDDQALDLKGVETTSNGEHRWKYYRGIPDRRQELPTYVRDLGKSVLADPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQT------EKVLGEFREGAWDKAARDPNDEMVSAGLTPDNIRKWEYLKGIQAQNETLFFRVLMDNFAEMASVVYTPTVGWACLNYSRMFRVARGMYFSSRDRGHMTSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNEKLRKDKSYLGLNQARLEGDEYLQIVDEFVAAIKARWPKALIQFEDFRTEYASKLLERYRYDHLCFNDDIQGTAATALAGIYAGLSAMDRPYSDIRDLRFVVCGAGSAGMGVVHWLSKAMEKHGATPEEAAGNFWVLDA 436
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A0A0V8F1_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A0A0V8F1_SACJA) HSP 1 Score: 595 bits (1534), Expect = 1.230e-207 Identity = 297/373 (79.62%), Postives = 314/373 (84.18%), Query Frame = 1
Query: 46 EVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDDS 1089
E RWRYH GVPD RQELPTYVRDLGKPVL DPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQ + + + G+WDKAARDPNDEM L+YRV+MDNFAEMA+VVYTPTVGWACLNFSRMFR+ARGMYFS++D+GHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNN KLR DKSYLGLNQ R+EGDEYLQVVDEFVAAVKARWP LIQFEDFRTEYA KLLERYRY HLCFNDDIQGTAATALAGIYAGLAA G+PY DIR +RFVVCGAGSAGMGV+QWLCKAMEKHGA DEAA + D+
Sbjct: 73 EPRWRYHRGVPDLRQELPTYVRDLGKPVLADPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQTA------KVLEEYREGAWDKAARDPNDEMVSAGLTPDNIRKWEYLTGIQGQNETLYYRVLMDNFAEMASVVYTPTVGWACLNFSRMFRVARGMYFSSRDKGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNPKLRKDKSYLGLNQPRIEGDEYLQVVDEFVAAVKARWPNVLIQFEDFRTEYAYKLLERYRYDHLCFNDDIQGTAATALAGIYAGLAAIGKPYSDIRHMRFVVCGAGSAGMGVIQWLCKAMEKHGADHDEAARNFWILDA 439
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A097IUJ1_9PHAE (Malic enzyme n=3 Tax=Sargassum TaxID=3015 RepID=A0A097IUJ1_9PHAE) HSP 1 Score: 567 bits (1462), Expect = 1.060e-196 Identity = 282/367 (76.84%), Postives = 306/367 (83.38%), Query Frame = 1
Query: 40 DGEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAA 1065
DGE+RWRY+ G PD RQELPTYVR LG VL +P +NKGTAFLWSERERFHLRGLLPARMV+ME+Q + F G+WDKAARDPNDEM L+YRV++DNF EMA+VVYTPTVGWAC+NFSRMFR+ARGMYFS++D+GHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCV+DVGTNN KL DK+YLGLNQ RLEG+EYLQV+DEFVAAVKARWPK +IQFEDFRTEYASKLLERYR+ HLCFNDDIQGTAATALAGIYAGLAA RPY DIR LRFVVCGAGSAGMGVV WL KAMEKHGA P+EAA
Sbjct: 76 DGEMRWRYYKGFPDGRQELPTYVRQLGPAVLANPHINKGTAFLWSERERFHLRGLLPARMVSMEDQTDR------VVEEFREGAWDKAARDPNDEMVSAGLTPDNIRKWEYLTGIQGQNETLYYRVLLDNFEEMASVVYTPTVGWACMNFSRMFRVARGMYFSSRDKGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVVDVGTNNDKLLEDKNYLGLNQRRLEGEEYLQVMDEFVAAVKARWPKVIIQFEDFRTEYASKLLERYRHHHLCFNDDIQGTAATALAGIYAGLAAMDRPYSDIRHLRFVVCGAGSAGMGVVLWLFKAMEKHGAGPEEAA 436
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A097IUI6_9PHAE (Malic enzyme n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUI6_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 1.750e-184 Identity = 271/372 (72.85%), Postives = 300/372 (80.65%), Query Frame = 1
Query: 46 EVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTRQDCQSIACFFSSGSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLVDD 1086
E+RW ++ G ++RQE PT+VRDLG VL +PLVNKGTAF SERERFHLRGLLPARM TMEEQ S + F G+WDKAARDP+DEM L+YRV+MDNF+EMAAVVYTPTVGWACLNFSRMFR+ARGMYFS+ D G MVS+AYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKL LYVAAAGFHP++VLPCVIDVGTNN+KLR D +YLGL+Q RLEGDEYL+VVDEFVAAVK RWPK +IQFEDFRTEYA KLLERYR HLCFNDDIQGTAATALAG+YAGLAA GRPY DIR+LR VVCGAGSAG+GVVQWL KAME+HGA +EA+ V D
Sbjct: 68 ELRWPFYRGFANKRQERPTFVRDLGPAVLSNPLVNKGTAFSRSERERFHLRGLLPARMATMEEQTS------KVLAEFREGAWDKAARDPDDEMVSAGLTPDNIRKWEYITSILSQNETLYYRVLMDNFSEMAAVVYTPTVGWACLNFSRMFRVARGMYFSSHDSGQMVSLAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLALYVAAAGFHPSKVLPCVIDVGTNNEKLRKDPNYLGLDQPRLEGDEYLKVVDEFVAAVKTRWPKVMIQFEDFRTEYAMKLLERYRSDHLCFNDDIQGTAATALAGVYAGLAAIGRPYSDIRRLRLVVCGAGSAGIGVVQWLSKAMEQHGATSEEASRNFWVLD 433
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A6H5L1D4_9PHAE (malic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1D4_9PHAE) HSP 1 Score: 363 bits (932), Expect = 5.410e-122 Identity = 184/232 (79.31%), Postives = 194/232 (83.62%), Query Frame = 1
Query: 286 GSWDKAARDPNDEM-------------------------LFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRAD-------KSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQ 885
GSWDKAARDPNDEM LFYRV++DNFAEMA+VVYTPTVGWACLN SRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVV GSRILGLGD+GMNGMGISIGKLDLYVAAAGFHPARVLPC+ID+GTN+KKL AD K+YLGLNQER +GDEYLQVVDEFVAAVKARWPKALIQ EDFRTEYASKLLERYRYKHLCFNDD+Q
Sbjct: 18 GSWDKAARDPNDEMVHAGLTPDNIRKWEYLKGIQGQNETLFYRVLLDNFAEMASVVYTPTVGWACLNLSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVMGGSRILGLGDVGMNGMGISIGKLDLYVAAAGFHPARVLPCLIDLGTNSKKLLADDRLQRSAKAYLGLNQERPDGDEYLQVVDEFVAAVKARWPKALIQVEDFRTEYASKLLERYRYKHLCFNDDVQ 249
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Match: A0A2P6VLH0_9CHLO (Malic enzyme n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLH0_9CHLO) HSP 1 Score: 369 bits (947), Expect = 6.270e-120 Identity = 188/339 (55.46%), Postives = 230/339 (67.85%), Query Frame = 1
Query: 109 RDLGKPVLLDPLVNKGTAFLWSERERFHLRGLLPARMVTMEEQASTR-------QDCQSIACFFSSGSWDKAAR--------DPNDEMLFYRVVMDNFAEMAAVVYTPTVGWACLNFSRMFRIARGMYFSAKDRGHMVSIAYNWPSHEVDAIVVTDGSRILGLGDLGMNGMGISIGKLDLYVAAAGFHPARVLPCVIDVGTNNKKLRADKSYLGLNQERLEGDEYLQVVDEFVAAVKARWPKALIQFEDFRTEYASKLLERYRYKHLCFNDDIQGTAATALAGIYAGLAATGRPYGDIRQLRFVVCGAGSAGMGVVQWLCKAMEKHGAPPDEAAGGCLV 1080
R G VL DP+ NKGTA ERER LRGLLP R++TME+Q + QD + S G + R +E LFYR++ +NF EMA ++YTPTVGWAC+N+ +++R RGMYFSA DRG M S+ +NWP VDAIVVTDGSRILGLGDLG NG+GI +GKLDLYV A GF+P RVLPCVIDVGTNN+ LR + Y+GL Q RL GD Y ++VDEFV AV RWP+A++QFEDF E+AS LL+RYRY H FNDD+QGTA TA+ G+Y +A G+P + +FVV GAGSAGMGVV + + M KHG P EAA V
Sbjct: 53 RSRGVDVLHDPVFNKGTAHPLVERERLGLRGLLPPRVLTMEQQKARALDRYWHGQDWIDPSQIESGGVAHEHTRKWLYLQELQDRNETLFYRLLCENFVEMAPIIYTPTVGWACINYHKLYRRPRGMYFSANDRGEMASMVWNWPHENVDAIVVTDGSRILGLGDLGTNGLGIPVGKLDLYVGAGGFNPGRVLPCVIDVGTNNEMLRNEPWYMGLKQPRLRGDAYYEIVDEFVQAVMGRWPRAVLQFEDFNIEHASPLLDRYRYSHCVFNDDVQGTAGTAVGGLYGAMAVAGKPPSALADQKFVVLGAGSAGMGVVSMIAQGMVKHGLSPQEAASRFYV 391 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1117.1538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1117.1538.1 >prot_Ecto-sp8_S_contig1117.1538.1 ID=prot_Ecto-sp8_S_contig1117.1538.1|Name=mRNA_Ecto-sp8_S_contig1117.1538.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=364bp RGAAGSSAEAGEGDGEVRWRYHLGVPDRRQELPTYVRDLGKPVLLDPLVNback to top mRNA from alignment at Ecto-sp8_S_contig1117:2314..10939+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1117.1538.1 ID=mRNA_Ecto-sp8_S_contig1117.1538.1|Name=mRNA_Ecto-sp8_S_contig1117.1538.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=8626bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1117:2314..10939+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1117:2314..10939+ >mRNA_Ecto-sp8_S_contig1117.1538.1 ID=mRNA_Ecto-sp8_S_contig1117.1538.1|Name=mRNA_Ecto-sp8_S_contig1117.1538.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1117:2314..10939+ (Ectocarpus species8 EcLAC_412)back to top |