mRNA_Ecto-sp8_S_contig10742.1119.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10742.1119.1
Unique NamemRNA_Ecto-sp8_S_contig10742.1119.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A6H5L1L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L9_9PHAE)

HSP 1 Score: 647 bits (1669), Expect = 3.170e-225
Identity = 395/521 (75.82%), Postives = 403/521 (77.35%), Query Frame = 1
Query:    4 SRAPPGFGEWDGGDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AAWGRRRPSPLAPRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRAYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDVALTLSGGGSATANSPLVLLQELEQLELAM--------------AMKVFRCPSLERRLAGLMHICGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDA 1518
            SRAPPGFGEWD GDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AAWGRRRPSPLAPRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRL+GGRPSFGEVLETFR+GKALRA+ASSRAVKETNWTLKECAAAALLSVPPESMRAATK+EIAE VSSVRD+ALTLSGGGSATA++PLVLLQELE                    A +VFRCPSLERRLAGLMHICGLVTLAERG GAVTTNGSLPPAGESRT AWAT R MEDWLVEVGFLEELFGSSMHVEL                                  AVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLV                                               G      R  VLHCREREWEGYGYGLLWLFVQDA
Sbjct:  199 SRAPPGFGEWDDGDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWGRRRPSPLAPRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRLSGGRPSFGEVLETFRIGKALRAHASSRAVKETNWTLKECAAAALLSVPPESMRAATKIEIAESVSSVRDLALTLSGGGSATAHAPLVLLQELEXXXXXXXXXXXXXXXGGEVGANEVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPPAGESRTAAWATPRVMEDWLVEVGFLEELFGSSMHVEL----------------------------------AVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLV-----------------------------------------------GGSVYTARKAVLHCREREWEGYGYGLLWLFVQDA 638          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 8.520e-214
Identity = 347/353 (98.30%), Postives = 349/353 (98.87%), Query Frame = 1
Query:  460 RFGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRAYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDVALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDA 1518
            +FGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALR YASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRD+ALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERG GAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFG SMHVEL KRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDA
Sbjct:  291 KFGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRTYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDLALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGPGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGCSMHVELAKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGDSPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLWLFVQDA 643          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A4D9CWC4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWC4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.540e-28
Identity = 129/443 (29.12%), Postives = 194/443 (43.79%), Query Frame = 1
Query:   67 DVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGFRVCYRP----------PGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWGRRRPSPL---APRPPADYAPDASMYVLAAVNRFGEAGGMATLAQRLTGGR--------PSFGEVLETFRVGKALRAYASSRAVKETNWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDVALTLSGGGSATANSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHI-------CGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHR 1311
            DVGTRV VWW +   Y+  TI  YD   G H + Y+DG++R   M  + F +   P          P                                  XXXXXXXX       P  L   A RPPA +    S  ++A +N F   GG+  L +   G          PS   +     +   LR    ++ +  T + +KE     +L++  E  R  TK ++      + D+ LTL G   A+      ++   +    ++A  + R P LE+RL GL +I         L +L      ++ +  SLPP+             +   L +      ++G++ H+E+  RS  +L FLA  +A+ +  LDLLW++++GKHEAVVR    ++L+L+P LSP  R HLFS +A   F  YT +TL L+YL T  A  A R
Sbjct:  308 DVGTRVKVWWGKDQVYYTGTISSYDECTGQHVVAYDDGDVRKYLMRHKEFEILNGPEKTSVASLPVPSRRSSSGEEDSPSPLAETASPGERRGPSLPTSPPXXXXXXXXXXXXXXWPHSLWLAARRPPASHQ-GVSCLLVAHINLFVNLGGLRVLGRHFYGRGSPLRSSRPPSLAGIRFYLALLHRLRGRLETQPLSVTVFQMKETVPGRVLALEEEDRRGLTKQDLKTLPQQLHDL-LTLLGVSRAS------VISATDSFRFSLACLLLRTPQLEKRLYGLAYIREALSKTAALPSLPS----SLASPPSLPPS------------LLLHLLRKTEVFPTVYGATTHLEILSRSPFLLHFLAAHHALHSHHLDLLWNTSLGKHEAVVRAFHALLLDLLPSLSPALRRHLFSRIASLSFRDYTAETLELLYLTTKAAWCATR 726          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A7S2SST1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SST1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.300e-12
Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1
Query:  778 LEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHE 1140
            ++ LEL  + K+F    LERRL GL +      L E+    V  +G        R +  A   A   WL E  F++E+ G  MH+E+ KRS+ ++ FLA+   V T  LDLLW++T   HE
Sbjct:    6 IDPLELEFSFKMFCASQLERRLQGLAY------LREKAEQIVRADGRHGHMTSPRKIGAAYVAA---WLAEKHFIDEVLGPHMHIEIIKRSDKLIRFLAEMGQVETRHLDLLWTTTTTSHE 117          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A7S3I8R3_9CILI (Hypothetical protein (Fragment) n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3I8R3_9CILI)

HSP 1 Score: 75.9 bits (185), Expect = 4.760e-11
Identity = 47/174 (27.01%), Postives = 78/174 (44.83%), Query Frame = 1
Query:  778 LEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAER--------GSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLV 1275
            LE  EL ++MK    P LE+R+ G+  I   +T A+           G  T   S+      +T  W  + A+ +W+      E +FG   H ++  RS  ++ FL   +  +   +D++W+S  GKHEA    +  ++  +V   SP    + FS +    F +   Q L LV
Sbjct:   59 LESFELELSMKCLNSPYLEKRIYGISEIIEKITYAKNKDEEDQKVARGIYTYQYSI-----FKTAKWLNSAALLEWIDRQNLFEIIFGPRSHPQIVMRSAELIKFLYTNSRFTRDNIDVIWNSAAGKHEAEREALINLIQEVVSCFSPQDLQYFFSKLTSLSFPEIDSQILSLV 227          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A7S2STX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.150e-10
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query:   67 DVGTRVDVWWPRYNSYFRATIERYDPNVGTHTLFYEDGEIRDSDMSKRGF 216
            DVG R+ VWWP+Y +Y+R TI  +DP +G HT+ Y+D ++R  D+  + F
Sbjct:   79 DVGARIQVWWPKYETYYRGTITHFDPGLGKHTVTYDDNDVRVYDLKTKQF 128          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: E9GZ89_DAPPU (Ubiquitinyl hydrolase 1 n=10 Tax=Daphnia TaxID=6668 RepID=E9GZ89_DAPPU)

HSP 1 Score: 72.8 bits (177), Expect = 1.100e-9
Identity = 51/173 (29.48%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  769 LQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHV-ELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVAR---TPFSKYTEQTLHLV 1275
            LQ LE   L M +++ +  S   ++  L  I  ++          T N  +  A E+    W TA  M  WL E   L+ +   S+H  +  ++ E IL F+ K  A++   LD +W+S  GKHEA+V+ +  ++  L    SP +  HLF C      T   K  E+ L L+
Sbjct:  251 LQNLEMFRLKMILRLLQISSFNGKMNALNEINKVIASVASYPHRTTGNSVVTGANETDE-EWLTAERMAGWLKEHRVLQIVLADSLHQPQYVEKLEKILRFVIKEKALTLEDLDRVWASQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQASWTTAGKKQREKLLELI 422          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A1R2CRI8_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CRI8_9CILI)

HSP 1 Score: 72.0 bits (175), Expect = 1.880e-9
Identity = 46/178 (25.84%), Postives = 90/178 (50.56%), Query Frame = 1
Query:  781 EQLELAMAMKVFRCPSLERRLAGLMHICGLV-TLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHR 1311
            + +EL +A+K+ +CP +E++L GL  I  ++  ++E+ S A      L P              +  W+VE   LE +  ++ H E+ KR   +L FLA+   + T  LDL+       H++++  +  V+ ++ P +S   + +L+  +  TP   Y E+ L ++Y F+ +++   R
Sbjct:  326 DSVELGLALKLLKCPYMEKKLKGLSEIKEIIENISEKESSAKRKYKLLNP------------EVLAKWIVENKVLETVVENA-HEEMIKRLSCVLIFLAENKKLKTFHLDLILKYAQNHHDSLLISVYKVITDIAPHISFKLQNYLYKKLTDTPAEDYDEKFLRMIYEFSTRSITRER 490          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: A0A813MIP5_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813MIP5_9BILA)

HSP 1 Score: 65.5 bits (158), Expect = 2.170e-7
Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 1
Query:  970 MEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFSKYTEQTLHLVYLFT 1287
            + DW +E   +E L+G ++HVE+ KRS+ I+ FLA  N ++   LD +W+S   KH A  + +   +++L+  L+ +   +L   +A+    K  EQTL L  L T
Sbjct:  400 LADWFIENNIVEYLYGPNLHVEVIKRSQEIVNFLAFTNRLTEKHLDAIWASAQLKHCA--KPVMETLISLIKHLNINSIKYLSQLIAKLDLVKQNEQTLLLSALLT 503          
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 8.680e-7
Identity = 40/140 (28.57%), Postives = 72/140 (51.43%), Query Frame = 1
Query:  772 QELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGSGAVTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRSEPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFL 1191
            + +E L+L +A+K++ CP +ER+L GL  +   V  AE    +  + GS P           T + + +WL +  F++ LF    H +L +RS  ++ FL +  A++   +D++W++  G  +   R+    VL   PFL
Sbjct:  665 RRVEWLQLDLALKLYSCPFMERKLQGLKVLADAVAAAETPISSSISQGSSPA---------LTPQELVEWLDDNNFVKALFAG--HTQLIRRSGDVVGFLCRERALTGGHVDIIWAAGGGGQDKDRRICVHEVLR--PFL 791          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10742.1119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5L1L9_9PHAE3.170e-22575.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU88_ECTSI8.520e-21498.30Ubiquitin domain-containing protein (Partial) (Fra... [more]
A0A4D9CWC4_9STRA1.540e-2829.12Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SST1_9STRA4.300e-1236.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3I8R3_9CILI4.760e-1127.01Hypothetical protein (Fragment) n=1 Tax=Fabrea sal... [more]
A0A7S2STX3_9STRA6.150e-1046.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
E9GZ89_DAPPU1.100e-929.48Ubiquitinyl hydrolase 1 n=10 Tax=Daphnia TaxID=666... [more]
A0A1R2CRI8_9CILI1.880e-925.84USP domain-containing protein n=1 Tax=Stentor coer... [more]
A0A813MIP5_9BILA2.170e-733.96Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
D8LE96_ECTSI8.680e-728.57Ubiquitin domain-containing protein n=2 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10742contigEcto-sp8_S_contig10742:1274..5006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score667.5
Seed ortholog evalue4.8e-189
Seed eggNOG ortholog2880.D8LU88
Model size1520
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5077@1,KOG1866@2759
EC3.4.19.12
Cds size1518
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10742.1119.1prot_Ecto-sp8_S_contig10742.1119.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10742 1274..5005 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143168.8363018-CDS-Ecto-sp8_S_contig10742:1273..13991681143168.8363018-CDS-Ecto-sp8_S_contig10742:1273..1399Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 1274..1399 +
1681143168.8478591-CDS-Ecto-sp8_S_contig10742:1845..25291681143168.8478591-CDS-Ecto-sp8_S_contig10742:1845..2529Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 1846..2529 +
1681143168.8565898-CDS-Ecto-sp8_S_contig10742:3003..32311681143168.8565898-CDS-Ecto-sp8_S_contig10742:3003..3231Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 3004..3231 +
1681143168.8659215-CDS-Ecto-sp8_S_contig10742:3683..37851681143168.8659215-CDS-Ecto-sp8_S_contig10742:3683..3785Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 3684..3785 +
1681143168.8746939-CDS-Ecto-sp8_S_contig10742:4034..41661681143168.8746939-CDS-Ecto-sp8_S_contig10742:4034..4166Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 4035..4166 +
1681143168.8851123-CDS-Ecto-sp8_S_contig10742:4334..44541681143168.8851123-CDS-Ecto-sp8_S_contig10742:4334..4454Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 4335..4454 +
1681143168.9007442-CDS-Ecto-sp8_S_contig10742:4879..50051681143168.9007442-CDS-Ecto-sp8_S_contig10742:4879..5005Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10742 4880..5005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10742.1119.1

>prot_Ecto-sp8_S_contig10742.1119.1 ID=prot_Ecto-sp8_S_contig10742.1119.1|Name=mRNA_Ecto-sp8_S_contig10742.1119.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=506bp
QSRAPPGFGEWDGGDGLSYDDNDVGTRVDVWWPRYNSYFRATIERYDPNV
GTHTLFYEDGEIRDSDMSKRGFRVCYRPPGWTPPPRRDSSPATGGADTPS
NAESAAAAAAPPGQLQQQQQDAAWGRRRPSPLAPRPPADYAPDASMYVLA
AVNRFGEAGGMATLAQRLTGGRPSFGEVLETFRVGKALRAYASSRAVKET
NWTLKECAAAALLSVPPESMRAATKVEIAECVSSVRDVALTLSGGGSATA
NSPLVLLQELEQLELAMAMKVFRCPSLERRLAGLMHICGLVTLAERGSGA
VTTNGSLPPAGESRTVAWATARAMEDWLVEVGFLEELFGSSMHVELTKRS
EPILAFLAKRNAVSTSQLDLLWSSTVGKHEAVVRVMSPVVLNLVPFLSPH
KRLHLFSCVARTPFSKYTEQTLHLVYLFTVKALEAHRTTKSSPASKPGGD
SPAGPHASAAASSQTGATPAGDGKGGLLRRGQVLHCREREWEGYGYGLLW
LFVQDA
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mRNA from alignment at Ecto-sp8_S_contig10742:1274..5006+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10742.1119.1 ID=mRNA_Ecto-sp8_S_contig10742.1119.1|Name=mRNA_Ecto-sp8_S_contig10742.1119.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3733bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10742:1274..5006+ (Ectocarpus species8 EcLAC_412)
CAGTCGAGGGCACCCCCGGGCTTCGGGGAGTGGGACGGCGGCGACGGGCT TTCCTACGACGACAATGACGTTGGCACGCGAGTCGATGTTTGGTGGCCCC GGTACAACTCGTACTTTCGAGCAACGGTGAGTTAGAAAGAGCGCGCGGTT TAGTGGGCGATGGAAGGGGGGGGCGCTCAGTTCACCGTACGCACAGATAC TTTTTCCTAGCTAAAAATATGTATCCTGCTACGAGGTACCGTGTTGGCGA CCAAATTTGATGTAACCGTGTACATGGCAGGCATAGCAAGTGCTTGGAAG CCGATGAAGTATGCTTGGCAGTTGGCGTTTGGCTACCGAACGCCGTCTCG CAAGCGCGGTGGACCCTCTTTCCGCACTAGAAGTGTTGTGTCTTCTGCCC CGTCGAGGGTGGCAAACTTTGCCTATCAGCACGGGATCGCAAAGTCCATC TGTATCCCCAGCGCGATCCATAACAATTTTGGCACCGCTTTTGTCGGGAG GAGAGTGTTCGTTATGACGCCTGAGTTACGGTCTCGGCCCCCGCTCCCCG CTCCCCGACCCCCTGTGCGCAGATCGAGCGGTACGACCCTAACGTTGGCA CGCACACCCTGTTCTACGAGGACGGCGAGATTCGCGATTCAGACATGTCC AAGCGCGGCTTTCGCGTCTGCTACCGGCCGCCGGGGTGGACGCCCCCGCC CCGACGAGACTCCTCTCCGGCGACAGGCGGCGCTGATACCCCTAGCAACG CGGAGTCGGCGGCGGCGGCGGCGGCACCCCCCGGACAGCTACAGCAGCAG CAGCAAGACGCCGCGTGGGGCCGGAGACGGCCCTCTCCGCTGGCGCCTCG GCCCCCCGCCGACTACGCCCCGGACGCGTCGATGTACGTGCTCGCCGCGG TGAACAGGTTCGGGGAGGCCGGCGGCATGGCGACGCTGGCGCAGCGGCTG ACCGGCGGCCGGCCGTCCTTCGGCGAGGTGCTGGAGACGTTCCGGGTCGG CAAGGCACTGAGGGCGTACGCCTCCTCCAGGGCGGTGAAGGAGACCAACT GGACCCTAAAGGAGTGCGCCGCGGCGGCGCTGCTGTCGGTCCCCCCGGAG TCGATGCGGGCGGCCACCAAGGTCGAGATCGCGGAGTGCGTGTCCAGCGT GAGGGACGTGGCGCTGACCCTCAGCGGCGGTGGCAGTGCCACAGCGAATT CGCCCCTGGTCCTGCTGCAGGAACTGGAGCAGCTGGAGCTGGCGATGGCC ATGAAGGTGGGGATGGGGGGGGGGGGGCTCAACAAGGTGGATGCGGTGTG GTGTGTTTTTCGTCAACCGTTGCGAGCGGCATGCCGCTGTGGCTGCTGCT GCTGCTGGTGCGTGGGACTGGCTGTGCAAGGAAGCGAATCGCTGTCTCTC TCACTGTCTTGGGGCAGAGGCAATGCCTACACCCCGCTCTCCAGGTGTTT CTTTTTCGCTGTCGGCTTTGAATATGGTTTGTGTTGTGCCCCGGCATGCC CCGCTAGTCCCTCCCCCTGTCTCAAACACTTTTTTCGTTCGGCAGAAACT CAATGGCAACCACATTTCGAGACTTCCCCACGTCTTGGGCCTCGTCGCAC GCCGGCCTTCTTTGCCGCTGCAGGATTGCTTTTCGCTTGTGTAATTTGTT ACGGCGTAGAAATGGCAAAACACGAAACCTTTTGAAGAGAGACGTCGTAT ACCGGTTTGAATGAAACCTGTCGGGCGCAGGTGTTCCGATGCCCGTCTTT GGAGAGACGCCTGGCCGGACTGATGCACATATGTGGCCTTGTCACCCTTG CCGAGCGGGGATCGGGGGCGGTTACGACGAACGGGTCGCTCCCTCCCGCG GGCGAGAGCCGGACCGTGGCCTGGGCTACCGCGAGGGCGATGGAGGACTG GCTTGTGGAGGTCGGGTTCCTGGAGGAGCTGTTCGGCTCCAGCATGCACG TGGAGCTTGTGAGTTTGTCTTTGTCTCGTCTTTCAATTTAACAGCGACTG GCTGGGCAGTGAGTGGCGCTGGTTGGAATGCGTGCTGCCTCCTCTTTTTT TTGTTGCTCTTTCTTCCCCCCCCCCCTCCCTCTCTCTCTATCTCTCTCTG TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTCTCTCT TTCTTCTCTCTTTCTCTCTATCTCTCTCCATGTATCTCTATATTTTTCTC CCTCCTGCTGCCTCTCTCCTGCGGCCGTGAGGCGTTACGGGTTCGCGTCA CGGTCCTGATAAAGAGATGTTACTGCTCGCTCGCGGTTTCGTGTCGGTGT GGGTGTGGGTGTGTCGAGCGCTTCTGGCCCTTTCCGTGCTTCCTTCCACC ACCAATTGACGTCCGTTTTCCCCGTTCGCTTCCTCGCCAACCTCGCATGC ATTGCCGAAGACCAAGCGGTCGGAACCCATACTTGCCTTCCTCGCGAAAC GGAACGCCGTGAGCACCAGCCAGCTCGACCTTCTTTGGAGCAGCACCGTT GGCAAGCACGAGGTGGGCACGACCGCAAAACAACACTGCGCGTTGATAAA GGCCTGCGTCCGTCTGGTGGTCGTGAGTACCGCACTACCTGGGGCACAAT GCTGCGCCCGCTAGTCTATGTCTACATTACCAGGTTCCCCGCCGCCCTTC CTACCCCTCGCCCATTTTTCTGGATGCTCCTTAACAAGTGGAAATTTGTT TCCCACGTCTTGGGGTGTGTGTGTGTCGACCTCCCTCCTCTCCGAATTTT TTGTTCCTCAGGCCGTCGTTCGAGTGATGTCTCCGGTGGTCCTCAACTTG GTCCCGTTCCTGTCGCCGCACAAGCGTCTCCATCTCTTCTCGTGCGTGGC CCGGACCCCGTTCTCCAAGTACACGGAGCAGACGCTCCACTTGGTGAGTG GGCGCGGAAACCGAAATCTCGCGACAAACAAGCCTTGAGATATTCACGCG CGCGGCGTGTTTTTTTTTGCTTTGTTGTGGACCTCTGTGGGCGACTGACA CTTGGCTTCTTGTCTGGCCTGCCGCTCTTCCTACGCACGACCGTAATCCC GTCGTGTGAAGGTGTACCTTTTTACAGTCAAAGCCTTGGAGGCGCACAGG ACAACAAAGTCGTCGCCGGCCAGCAAGCCAGGGGGCGATTCTCCTGCGGG CCCTCACGCTTCAGCCGCCGCATCTTCTCAGGTGGGGGTGTTTACACGGC GAGGAAGGCGGTACGCGGGGGTACACAGGGGGGTAGGGGAGGACGAGAGA GAGGAGGGAGGAAGGAGTATGGGTGCAGAAGGCGACGGGGGAAATCGCGA CGCTCGAAAGTGGCACGAGGATAGGTCCTTCTCAATATTTCAATGTGCGA CGAAATGTTTTAGCCTGCTGCGCTCTCCTTTTCACGTGCGCCCCGATACA CCCCCTCCCATCTGTTCTGGCCTGCGGGTTCCGGCGAAAACCCGGCGTGC TCCCTACCAACTACGGATGATGCCTCTGGCAAAACGACTTTCGGCATGCG AGTACCCCCCTGCTGTCAATGGTCTAACAACTAAGGCATGCGAAACATGA GCACGCTCCCCCCCCCCCCCCCTCGCGCCCCCCCCCCCCCCTCCACTCCG CCGCAGACTGGTGCCACGCCAGCGGGTGACGGTAAGGGGGGACTTCTTCG ACGGGGGCAGGTGCTGCACTGCCGCGAGCGAGAGTGGGAGGGCTACGGGT ACGGGCTGCTCTGGCTCTTCGTGCAGGACGCGC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10742:1274..5006+

>mRNA_Ecto-sp8_S_contig10742.1119.1 ID=mRNA_Ecto-sp8_S_contig10742.1119.1|Name=mRNA_Ecto-sp8_S_contig10742.1119.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1518bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10742:1274..5006+ (Ectocarpus species8 EcLAC_412)
CAGTCGAGGGCACCCCCGGGCTTCGGGGAGTGGGACGGCGGCGACGGGCT
TTCCTACGACGACAATGACGTTGGCACGCGAGTCGATGTTTGGTGGCCCC
GGTACAACTCGTACTTTCGAGCAACGATCGAGCGGTACGACCCTAACGTT
GGCACGCACACCCTGTTCTACGAGGACGGCGAGATTCGCGATTCAGACAT
GTCCAAGCGCGGCTTTCGCGTCTGCTACCGGCCGCCGGGGTGGACGCCCC
CGCCCCGACGAGACTCCTCTCCGGCGACAGGCGGCGCTGATACCCCTAGC
AACGCGGAGTCGGCGGCGGCGGCGGCGGCACCCCCCGGACAGCTACAGCA
GCAGCAGCAAGACGCCGCGTGGGGCCGGAGACGGCCCTCTCCGCTGGCGC
CTCGGCCCCCCGCCGACTACGCCCCGGACGCGTCGATGTACGTGCTCGCC
GCGGTGAACAGGTTCGGGGAGGCCGGCGGCATGGCGACGCTGGCGCAGCG
GCTGACCGGCGGCCGGCCGTCCTTCGGCGAGGTGCTGGAGACGTTCCGGG
TCGGCAAGGCACTGAGGGCGTACGCCTCCTCCAGGGCGGTGAAGGAGACC
AACTGGACCCTAAAGGAGTGCGCCGCGGCGGCGCTGCTGTCGGTCCCCCC
GGAGTCGATGCGGGCGGCCACCAAGGTCGAGATCGCGGAGTGCGTGTCCA
GCGTGAGGGACGTGGCGCTGACCCTCAGCGGCGGTGGCAGTGCCACAGCG
AATTCGCCCCTGGTCCTGCTGCAGGAACTGGAGCAGCTGGAGCTGGCGAT
GGCCATGAAGGTGTTCCGATGCCCGTCTTTGGAGAGACGCCTGGCCGGAC
TGATGCACATATGTGGCCTTGTCACCCTTGCCGAGCGGGGATCGGGGGCG
GTTACGACGAACGGGTCGCTCCCTCCCGCGGGCGAGAGCCGGACCGTGGC
CTGGGCTACCGCGAGGGCGATGGAGGACTGGCTTGTGGAGGTCGGGTTCC
TGGAGGAGCTGTTCGGCTCCAGCATGCACGTGGAGCTTACCAAGCGGTCG
GAACCCATACTTGCCTTCCTCGCGAAACGGAACGCCGTGAGCACCAGCCA
GCTCGACCTTCTTTGGAGCAGCACCGTTGGCAAGCACGAGGCCGTCGTTC
GAGTGATGTCTCCGGTGGTCCTCAACTTGGTCCCGTTCCTGTCGCCGCAC
AAGCGTCTCCATCTCTTCTCGTGCGTGGCCCGGACCCCGTTCTCCAAGTA
CACGGAGCAGACGCTCCACTTGGTGTACCTTTTTACAGTCAAAGCCTTGG
AGGCGCACAGGACAACAAAGTCGTCGCCGGCCAGCAAGCCAGGGGGCGAT
TCTCCTGCGGGCCCTCACGCTTCAGCCGCCGCATCTTCTCAGACTGGTGC
CACGCCAGCGGGTGACGGTAAGGGGGGACTTCTTCGACGGGGGCAGGTGC
TGCACTGCCGCGAGCGAGAGTGGGAGGGCTACGGGTACGGGCTGCTCTGG
CTCTTCGTGCAGGACGCG
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