mRNA_Ecto-sp8_S_contig10388.630.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: D7FSY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI) HSP 1 Score: 480 bits (1236), Expect = 1.750e-160 Identity = 230/234 (98.29%), Postives = 231/234 (98.72%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVTGTQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
DRTVKFWDTRTSTPAAVVTLCERAYSMDT+GAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPA TYGNTKLSFAFKCHRV G QSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK
Sbjct: 133 DRTVKFWDTRTSTPAAVVTLCERAYSMDTKGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPATTYGNTKLSFAFKCHRVAGAQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 366
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A835ZCU3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU3_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.060e-72 Identity = 131/238 (55.04%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVT----GTQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
D+T++FWD + P +TL ER Y ++ R +VV TADRK VYNLG+ +++ +S L+YQTRC +IFPDQ G+AVGSIEGRV IEYFSE + +G A TK FAFKCHR T +Q+ V+S+NSIAFH YGTFATAGSDG F+FWDKDSRQRLK + KQ TIS FSPDG L+ YA+SYDWSQGV A P + I +H V DDEIKPR K +K
Sbjct: 139 DKTIRFWDMKQPNPVHTMTLSERVYDLEVRDNWLVVCTADRKNSVYNLGA----NCKLESVAESTLKYQTRCAAIFPDQTGYAVGSIEGRVAIEYFSELPNE----TGVPRALPASQTKRGFAFKCHRETLPQNKSQTGVFSINSIAFHPYGTFATAGSDGTFNFWDKDSRQRLKQFP-KQATTISTAAFSPDGSLYAYAVSYDWSQGVGGAQPGLPHEIKLHVVTDDEIKPRDKPRK 367
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A8J2WTP8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTP8_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.720e-63 Identity = 117/238 (49.16%), Postives = 150/238 (63.03%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVTGTQSS-------VYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPK 1845
D++V+ WD RT P A + L ER Y+MD R ++VV TA+RK+C+Y+L S N P + DSPLR+QTRCV+ FPD++GFA+GSIEGRVGI + + N +FAFKCHR T + +Y+VNSIAFH GTFATAGSDG +++WDKDS+QRL + K TIS FSP GGL+ YA+SYDWS+G E +PQ N I +H V DEI R K
Sbjct: 139 DKSVRAWDCRTPNPVATIPLPERCYAMDVRHPLLVVGTAERKVCIYDLSS--ANWQQPYRVEDSPLRHQTRCVAAFPDREGFAIGSIEGRVGIHHVDPK-----------------NAHRNFAFKCHRETQDARAGQTGLCNIYAVNSIAFHHLGTFATAGSDGVYNYWDKDSKQRLMQFK-KAAQTISTACFSPSGGLYAYALSYDWSRGSESHSPQIPNQIMIHRVQKDEITQRNK 356
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A4S8VY86_AURPU (WD40 repeat-like protein n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8VY86_AURPU) HSP 1 Score: 223 bits (567), Expect = 7.400e-62 Identity = 120/240 (50.00%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPA-PQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRV----TGTQSSVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
D+T+K+WD R TPAA V ER Y+MDTR ++VVATADR + ++NL N P+ P SPL++QTR +S F D GFA+GSIEGR I+Y E+ A F+FKCHR T QS+VYSVNSI+FH +GTF+TAGSDG FHFWDKD++ RLK Y + G +IS FS DG +F YA+SYDW QG NPQ N + +H V DE KPRP KK
Sbjct: 150 DKTIKYWDLRQQTPAASVQCKERVYAMDTRDQLLVVATADRWVEIFNL-----NQPSQPYKQIQSPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEKDASSN-----------------FSFKCHRQNAPNTRDQSNVYSVNSISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGNIFAYAVSYDWHQGYSGNNPQYPNKVMLHPVIGDECKPRPNSKK 366
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A074YVJ3_AURSE (Uncharacterized protein n=1 Tax=Aureobasidium subglaciale (strain EXF-2481) TaxID=1043005 RepID=A0A074YVJ3_AURSE) HSP 1 Score: 221 bits (564), Expect = 1.480e-61 Identity = 117/239 (48.95%), Postives = 152/239 (63.60%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVTGT----QSSVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
D+T+K+WD R TPAA V +R Y+MDTR ++VVATADR + ++NL N Q SPL++QTR +S F D GFA+GSIEGR I+Y E+ ++ +F+FKCHR T QS+VYSVNSI+FH +GTF+TAGSDG FHFWDKD++ RLK Y + G +IS FS DG +F YA+SYDW QG + NPQ N + +H++A DE KPRP KK
Sbjct: 140 DKTIKYWDLRQQTPAATVQCKDRVYAMDTRDQLLVVATADRWVEIFNLAQ--PNSAYKQIQ--SPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEK-----------------DSSSNFSFKCHRQTAPNTRDQSNVYSVNSISFHPIHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGSVFAYAVSYDWHQGYQQNNPQYPNKVMLHSIAPDECKPRPNAKK 356
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A7S3K4J4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J4_9STRA) HSP 1 Score: 221 bits (562), Expect = 4.580e-61 Identity = 115/239 (48.12%), Postives = 151/239 (63.18%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVTG-------TQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKD 1848
D ++ WD RT TPAA +TL ER Y+M +MVV TA+RKI +Y+L +N P +SPLR+QTRC++ FPD+ GFA+GSIEGRV I + + + A + FAFKCHR T T ++Y+VNSI FHK+GTFATAGSDG ++FWDKDS+QRL A+ NTI FSP G L+ YA+SYDWS+G E+ NPQ N I +H V ++EI+ R K+
Sbjct: 149 DNAIRCWDARTPTPAATITLPERCYAMAVNHPLMVVGTAERKILMYDLSR--SNWQQPMRFEESPLRHQTRCIATFPDRDGFAIGSIEGRVAIHHVNIKEAGRN-----------------FAFKCHRDTQENRVGQPTVCNIYAVNSIVFHKFGTFATAGSDGVYNFWDKDSKQRLMAFKAAP-NTIPCASFSPIGNLYAYALSYDWSRGSENYNPQTPNYIMLHHVKEEEIRQRKKN 367
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A4V4KBG8_AURPU (WD40 repeat-like protein n=22 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4V4KBG8_AURPU) HSP 1 Score: 223 bits (567), Expect = 1.170e-60 Identity = 120/240 (50.00%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPA-PQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRV----TGTQSSVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
D+T+K+WD R TPAA V ER Y+MDTR ++VVATADR + ++NL N P+ P SPL++QTR +S F D GFA+GSIEGR I+Y E+ A F+FKCHR T QS+VYSVNSI+FH +GTF+TAGSDG FHFWDKD++ RLK Y + G +IS FS DG +F YA+SYDW QG NPQ N + +H V DE KPRP KK
Sbjct: 255 DKTIKYWDLRQQTPAASVQCKERVYAMDTRDQLLVVATADRWVEIFNL-----NQPSQPYKQIQSPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEKDASSN-----------------FSFKCHRQNAPNTRDQSNVYSVNSISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGNIFAYAVSYDWHQGYSGNNPQYPNKVMLHPVIGDECKPRPNSKK 471
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A4S9BKU6_AURPU (WD40 repeat-like protein n=9 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S9BKU6_AURPU) HSP 1 Score: 223 bits (567), Expect = 1.850e-60 Identity = 120/240 (50.00%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPA-PQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRV----TGTQSSVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
D+T+K+WD R TPAA V ER Y+MDTR ++VVATADR + ++NL N P+ P SPL++QTR +S F D GFA+GSIEGR I+Y E+ A F+FKCHR T QS+VYSVNSI+FH +GTF+TAGSDG FHFWDKD++ RLK Y + G +IS FS DG +F YA+SYDW QG NPQ N + +H V DE KPRP KK
Sbjct: 274 DKTIKYWDLRQQTPAASVQCKERVYAMDTRDQLLVVATADRWVEIFNL-----NQPSQPYKQIQSPLKWQTRTISCFADATGFAIGSIEGRCAIQYVEEKDASSN-----------------FSFKCHRQNAPNTRDQSNVYSVNSISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYP-EVGGSISCTDFSHDGNIFAYAVSYDWHQGYSGNNPQYPNKVMLHPVIGDECKPRPNSKK 490
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: A0A7S4HJS6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HJS6_9EUKA) HSP 1 Score: 218 bits (554), Expect = 2.730e-60 Identity = 118/235 (50.21%), Postives = 151/235 (64.26%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVTGTQSSVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 1854
DRTVK+WD +T P+A + L ERA+ MD R ++VVATADRKI V NL N A DSPL+YQ+RCV+ FPDQQGF +GSIEGRV + + E+ + +FAFKCHR +Y+VN I FH +GTFAT GSDG ++FWDKDSRQRLKA++ K I V F+ DG +F YA+SYDWS+G EH NP+ TN++ +H+V + EIK R KK
Sbjct: 130 DRTVKYWDGKTPNPSATLQLPERAFCMDVRYPLLVVATADRKIIVVNLS----NPTAIFKAVDSPLKYQSRCVACFPDQQGFCLGSIEGRVAVHHVQER-----------------DVTKNFAFKCHREN---QDIYAVNCITFHPTFGTFATTGSDGTYNFWDKDSRQRLKAFN-KASMAIPVGAFNRDGTIFAYAVSYDWSKGSEHYNPR-TNHLLLHSVPEAEIKSRATQKK 338
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Match: F0Y1R3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1R3_AURAN) HSP 1 Score: 217 bits (553), Expect = 5.460e-60 Identity = 117/238 (49.16%), Postives = 145/238 (60.92%), Query Frame = 1
Query: 1153 DRTVKFWDTRTSTPAAVVTLCERAYSMDTRGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPAPTYGNTKLSFAFKCHRVT-------GTQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPK 1845
D+T+K WD R TP A V L ER YSMD +MVVATA+RK+CVY+L + N P + DSPL++QTRCV FPD++GFA+GSIEGRV I + + A + FAFKCHR T + ++Y+VN IAFH GTFATAGSDG F+FWDKDS+QRL A+ + IS FSP G L+ YA+SYDWS+G E P N I +H V DEI R K
Sbjct: 136 DKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCVYDLSN--ANWQRPYRVEDSPLKHQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHKN-----------------FAFKCHRDTQDGRAGQASTCNIYAVNDIAFHNLGTFATAGSDGVFNFWDKDSKQRLMAFK-RADRPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNK 353 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10388.630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10388.630.1 >prot_Ecto-sp8_S_contig10388.630.1 ID=prot_Ecto-sp8_S_contig10388.630.1|Name=mRNA_Ecto-sp8_S_contig10388.630.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=330bp MPHRVHLHEPKRRRFILELLSRHDLSYKSFQTRCLSQLISNNQHFRRVHPback to top mRNA from alignment at Ecto-sp8_S_contig10388:564..4996- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10388.630.1 ID=mRNA_Ecto-sp8_S_contig10388.630.1|Name=mRNA_Ecto-sp8_S_contig10388.630.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4433bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10388:564..4996- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10388:564..4996- >mRNA_Ecto-sp8_S_contig10388.630.1 ID=mRNA_Ecto-sp8_S_contig10388.630.1|Name=mRNA_Ecto-sp8_S_contig10388.630.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10388:564..4996- (Ectocarpus species8 EcLAC_412)back to top |