mRNA_Ecto-sp8_S_contig1027.453.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: D8LNH9_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH9_ECTSI) HSP 1 Score: 164 bits (414), Expect = 9.750e-51 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 1 MSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYET 231
MSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE
Sbjct: 1 MSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEV 77
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: D7G352_ECTSI (Phosphatidylinositol transfer protein SEC14 and related proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G352_ECTSI) HSP 1 Score: 160 bits (406), Expect = 6.280e-46 Identity = 78/90 (86.67%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 10 QRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE--TRVVRYLRGRLVEGG 273
QRS HLLLLSWPRWFDWI+RFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE T V + GR+VE G
Sbjct: 298 QRSAHLLLLSWPRWFDWIYRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYESDTEFVWHFLGRIVEVG 387
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: A0A6H5K175_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.710e-43 Identity = 76/85 (89.41%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 7 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYETRVVRYLRGRL 261
P+RSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE V G L
Sbjct: 856 PERSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEAIEVDMRNGAL 940
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: A0A6H5LC05_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC05_9PHAE) HSP 1 Score: 154 bits (389), Expect = 5.330e-42 Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 1
Query: 7 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYET 231
P+RS HL+LLSWPRWFDWI+RFIRPL+SESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE
Sbjct: 523 PERSAHLMLLSWPRWFDWIYRFIRPLISESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEV 597
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: D8LL64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL64_ECTSI) HSP 1 Score: 120 bits (301), Expect = 6.530e-34 Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 1
Query: 109 MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE--TRVVRYLRGRLVEGGALERFRPVL 300
MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE TR VRY+RG + EGGALERFRPVL
Sbjct: 1 MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEGDTRFVRYMRGWIAEGGALERFRPVL 66
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: A0A7S1UMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMG2_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.180e-8 Identity = 35/76 (46.05%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 7 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSK-IDNDQIPKEYGGASEYALGEHPYET 231
P L++ P W F R +L ES K + S S T L K ID++QIPKEYGG+S+YALGEHPYE
Sbjct: 528 PMAMKRAFLVNSPWWLAGAFSGFRSILPESVKVDILS---ESQSVTALRKFIDDNQIPKEYGGSSQYALGEHPYEV 600
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: A0A7S1ZXQ5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZXQ5_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 9.420e-7 Identity = 27/79 (34.18%), Postives = 39/79 (49.37%), Query Frame = 1
Query: 7 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYETRVVR 243
P + + P W + + L ES M S + ++ L +D+DQIPKEYGG+S Y LGEHP E + +
Sbjct: 285 PMNVKRACIANIPFWLAGSYSYANRFLPESVAVSMMSSSKSAAEGGLRDFVDDDQIPKEYGGSSPYKLGEHPLEIELCK 363
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: B8CAC2_THAPS (Phosphatidylinositol/phosphatidylcholine transfer protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAC2_THAPS) HSP 1 Score: 51.2 bits (121), Expect = 2.660e-5 Identity = 27/78 (34.62%), Postives = 44/78 (56.41%), Query Frame = 1
Query: 7 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTAN----SVYETLLSKIDNDQIPKEYGGASEYALGEHPYE 228
P+R+ + +L+ P +F I+R I+PL+ T K+ N ++ + L+ +I IP+EYGG S+Y LG P E
Sbjct: 239 PERAGTIYILNSPPFFQVIWRMIKPLVDPVTLDKVRVVQNNQGHFAIRDALMERIPIQNIPREYGGESQYMLGGAPEE 316
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Match: A0A7S1DB15_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DB15_CYCTE) HSP 1 Score: 50.4 bits (119), Expect = 5.160e-5 Identity = 20/24 (83.33%), Postives = 23/24 (95.83%), Query Frame = 1
Query: 157 IDNDQIPKEYGGASEYALGEHPYE 228
ID+DQIPK+YGG+S YALGEHPYE
Sbjct: 17 IDDDQIPKQYGGSSPYALGEHPYE 40 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1027.453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1027.453.1 >prot_Ecto-sp8_S_contig1027.453.1 ID=prot_Ecto-sp8_S_contig1027.453.1|Name=mRNA_Ecto-sp8_S_contig1027.453.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=100bp MSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLback to top mRNA from alignment at Ecto-sp8_S_contig1027:15841..16794- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1027.453.1 ID=mRNA_Ecto-sp8_S_contig1027.453.1|Name=mRNA_Ecto-sp8_S_contig1027.453.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=954bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1027:15841..16794- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1027:15841..16794- >mRNA_Ecto-sp8_S_contig1027.453.1 ID=mRNA_Ecto-sp8_S_contig1027.453.1|Name=mRNA_Ecto-sp8_S_contig1027.453.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=300bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1027:15841..16794- (Ectocarpus species8 EcLAC_412)back to top |