mRNA_Ecto-sp8_S_contig10197.319.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 2.210e-158 Identity = 260/346 (75.14%), Postives = 262/346 (75.72%), Query Frame = 3
Query: 72 MGKKAKRTTDGTEGPRRPETLRHTRVYGPLVLPDGKGENDAVDLELTSKRVYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSG-SKKKGRSDXXXAFAGAGEEGAPLRGGETVFYK-----------------------------------------------------------------------------GNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG 875
MGKK KRTTDGTE PRR ETLRHTRVYGPLVLPDGKGENDAVDLELTSKR+YQDTILS+DGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXX SKKKGRSDXXX FAGAGEEGAPLRGGETVFYK GNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG
Sbjct: 1 MGKKGKRTTDGTEDPRRSETLRHTRVYGPLVLPDGKGENDAVDLELTSKRIYQDTILSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXSKKKGRSDXXXTFAGAGEEGAPLRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG 346
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE) HSP 1 Score: 385 bits (990), Expect = 3.300e-133 Identity = 207/211 (98.10%), Postives = 208/211 (98.58%), Query Frame = 3
Query: 243 SVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG 875
S+DGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXX KKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG
Sbjct: 22 SIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG 232
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.620e-78 Identity = 127/219 (57.99%), Postives = 154/219 (70.32%), Query Frame = 3
Query: 222 VYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMG-GRRPLACNSNIRIYRYAVGQRFGKHIDESV-DDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
VYQD I +DG L+P EC AWI +GE GFE +FH T E+AHRDNGR+ +HS D+AAA++ R+ FVPA + GR+ CN+NIR+YRY VGQRFGKHIDESV D G TS++T+L+YLNG +GS +G EEG PL GGET+FYKG+YG K+AAS +P G+CLVHGHG +CLLHEGA VTSGVKYLLRTDVMY
Sbjct: 1 VYQDLIFRIDGFLTPAECGAWIDWGEETGFENTFHTATREIAHRDNGRLQVHSPDIAAAIWQRIQPFVPAELSRGRKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNG-------------AGSPVRG------------EEG-PLAGGETLFYKGSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMY 193
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.710e-69 Identity = 117/241 (48.55%), Postives = 150/241 (62.24%), Query Frame = 3
Query: 177 KGENDAVDLELTSKRVYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAG------EEGA--PLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMYG 875
K V L L ++ +Y+D I + +P+EC AWIR+GE GFE FH T E AHRDNGR+ S VA ++ R+ FVP +MGG+ C++NIR+Y+Y GQRFGKHID S D++G S +TVL+YL SG + +GR A G EE PL+GG TVFY+G+YGDKVAAS +P QG+CL+HGHG +CL+HEGA V GVKY+LRTDVMYG
Sbjct: 80 KNNQKMVSLSLRTEGIYRDLIFGIPNFFTPQECRAWIRFGENNGFELQFHNATQEYAHRDNGRLQWESEAVAGVLWERLRAFVPTHMGGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYL---------------SGGEDQGRPSPAEEEAKGGAPLDGLEESLQEPLQGGHTVFYRGSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMYG 305
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA) HSP 1 Score: 218 bits (556), Expect = 5.040e-67 Identity = 115/254 (45.28%), Postives = 156/254 (61.42%), Query Frame = 3
Query: 123 PETLRHTRVYG---PLVLPDGKGENDAVDLELTSKRVYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGA-PLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
P+TL+ T V P ++P+ +G + V L + + +Y+DTI ++ LS ECAAWI +GE +GFE SF +Q E AHRDNGRI++ S +A A F R+ +P G R+ +CN+NIR+Y+Y GQRFG+H+DESV D NG S +TVL+YLNG + S+ + GA E L GGET FY+ ++G +A + P++G L+HGHG QCL HEGA V GVKYLLRTDVMY
Sbjct: 16 PQTLKQTTVVFVKCPPLIPEPRGYSKPVQLNMDKEYLYKDTIYTLTNFLSDSECAAWIEFGEREGFEASFQKQNRECAHRDNGRISIESESIAQAFFLRLNPSLPEKYGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGH---------------NEDNTSETPRSGDGADLEAINTLVGGETKFYRRHHGSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMY 254
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A7S2ZAS2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAS2_9RHOD) HSP 1 Score: 209 bits (533), Expect = 1.670e-63 Identity = 110/235 (46.81%), Postives = 140/235 (59.57%), Query Frame = 3
Query: 168 PDGKGENDAVDLELTSKRVYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
P G V++ + ++ YQD I V+ + REC AWI YGE G +FH ++++AHRDNGRI HS ++AA +F RV +P P C+SNIR+YRY GQRFGKH+DES D ENG S +T+LIYLN EG LRGGETVFYKGNYGDK+A S++PR G+ L+HGHG +C++HEG AV G KY+LRTDVMY
Sbjct: 55 PKGYYGEKMVNVRMKRRQGYQDLIHVVEDFFTERECTAWIEYGERYGSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN---------------------------------HEG--LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 254
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A7S2Z9G1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9G1_9RHOD) HSP 1 Score: 178 bits (452), Expect = 1.320e-52 Identity = 95/196 (48.47%), Postives = 120/196 (61.22%), Query Frame = 3
Query: 285 IRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
+RYG + +FH ++++AHRDNGRI HS ++AA +F RV +P P C+SNIR+YRY GQRFGKH+DES D ENG S +T+LIYLN EG LRGGETVFYKGNYGDK+A S++PR G+ L+HGHG +C++HEG AV G KY+LRTDVMY
Sbjct: 2 LRYGSTE----AFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN---------------------------------HEG--LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 158
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A2R5GIH8_9STRA (Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH8_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.270e-48 Identity = 101/226 (44.69%), Postives = 131/226 (57.96%), Query Frame = 3
Query: 195 VDLELTSKRVYQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDES-VDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVM 869
V L+L V +D I +V LSP ECAAWI +GE +GF + ++ A RDNGRI++H +VAA +F R+ VPA + GR+ + C+ NIR+YRYA GQRFGKHIDES + + S++T+L YLN +EG L GGETVFY GN G K A P QG L+H HG +CL+HEGA V +GVKYLLR+DV+
Sbjct: 105 VKLDLERFAVLRDLIFAVPRCLSPEECAAWIAWGEKRGFASAKQASSAGFAFRDNGRISVHDPEVAAIIFQRLRGVVPAEIDGRKAVGCSPNIRLYRYATGQRFGKHIDESNFEQDLDAWSEFTLLFYLN---------------------------------DEG--LDGGETVFYSGNTGTKEALRVPPAQGLALLHWHGDRCLVHEGANVRAGVKYLLRSDVL 295
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A813GA74_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GA74_POLGL) HSP 1 Score: 171 bits (434), Expect = 1.720e-48 Identity = 105/270 (38.89%), Postives = 145/270 (53.70%), Query Frame = 3
Query: 117 RRPETLRHTRVYGPLVLP--------DGKG-ENDAVDLELTSKRVYQD------TILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMG--GRRPLACNSNIRIYRYAVGQRFGKHIDESVDDEN-GLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
R PE R + P VLP DG G E +A L + ++ I ++D L+ EC WI +GE +GFE + +Q S AHRDNGRI +VA+ ++ R+ FVP +G R+ L C+ IR+YRY GQRFG+H+D S ++ + G ++ +TVLIYLNG G ++ E+ ++GGETVF+K + G K A F P +G CL HGHG C+ HEGA V GVKY+LRTDV+Y
Sbjct: 26 RLPEPDRTIHISAPPVLPPFQESEDTDGAGYEAEAFALPRKMQLMHLSLLTRPVAISAIDNFLTEEECRGWISWGERKGFEEAKQKQNSVFAHRDNGRIEFDGPEVASQIWLRMKPFVPETVGCPPRKALGCSPRIRVYRYTRGQRFGQHVDGSREEPSMGGSTHFTVLIYLNG--------------GDRE--------------EKDLQVKGGETVFWKDHDGKKPALVFPPTRGVCLFHGHGDDCMTHEGAGVEDGVKYVLRTDVVY 267
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Match: A0A812Q5H6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q5H6_9DINO) HSP 1 Score: 170 bits (431), Expect = 4.570e-48 Identity = 105/272 (38.60%), Postives = 144/272 (52.94%), Query Frame = 3
Query: 117 RRPETLRHTRVYGPLVLP--DGKGENDAVDLELTS------KRV---------YQDTILSVDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMG--GRRPLACNSNIRIYRYAVGQRFGKHIDESVDD-ENGLTSQWTVLIYLNGXXXXXXXXXXXXXSGSKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 872
R PE R ++ P+V+P D + E A D S ++V + I ++D L+ EC WI +GE +GFE + + S AHRDNGRI S D+A ++ R+ FVP +G R L C+ IR+YRY GQRFG+H+D S D+ E G + +TVL+YLNG G D + +RGGETVF+K + G + A +F P +G CL HGHG +C+ HEGA V GVKY+LRTDV+Y
Sbjct: 22 RLPEPDRTVQLTVPVVIPPVDFEAEEAAEDSSFASLANGLPRKVQLQHLPLLSHPVRISAIDNFLTEEECLGWISWGERKGFEEAKQKANSVYAHRDNGRIEFSSPDIAYLIWLRIKAFVPDFVGKPARAALGCSPRIRVYRYVKGQRFGQHVDGSRDEPEMGGRTHFTVLVYLNG-------------------GERDP---------KDLQVRGGETVFWKDHDGKRPALAFPPTRGVCLFHGHGDECMTHEGAGVEEGVKYVLRTDVVY 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10197.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10197.319.1 >prot_Ecto-sp8_S_contig10197.319.1 ID=prot_Ecto-sp8_S_contig10197.319.1|Name=mRNA_Ecto-sp8_S_contig10197.319.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=269bp MGKKAKRTTDGTEGPRRPETLRHTRVYGPLVLPDGKGENDAVDLELTSKRback to top mRNA from alignment at Ecto-sp8_S_contig10197:1230..3715- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10197.319.1 ID=mRNA_Ecto-sp8_S_contig10197.319.1|Name=mRNA_Ecto-sp8_S_contig10197.319.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2486bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10197:1230..3715- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10197:1230..3715- >mRNA_Ecto-sp8_S_contig10197.319.1 ID=mRNA_Ecto-sp8_S_contig10197.319.1|Name=mRNA_Ecto-sp8_S_contig10197.319.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=807bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10197:1230..3715- (Ectocarpus species8 EcLAC_412)back to top |