mRNA_Ecto-sp8_S_contig10169.279.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: D7FVG9_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG9_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 1.570e-7 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 1 IAKELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAA 183
I +ELL GADPA V+ A+H AA +G + +I ML AKAP ++ G +G TPLG AA
Sbjct: 136 IVRELLDGGADPAMVDTYDLTAMHFAAGKGRVELIDMLAAKAPATLHRAGRDGFTPLGKAA 196
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: T0R1T5_SAPDV (TKL protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1T5_SAPDV) HSP 1 Score: 55.8 bits (133), Expect = 3.340e-7 Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 IAKELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAAREGHPDAVSFLL 219
IA+ELL AGA + + DG +H AA+ G V+++LL KAP+A++ +GLT + AAR GH D V LL
Sbjct: 2017 IAEELLHAGARLCQ-DLDGNTPLHLAATFGQGSVVELLLTKAPDAVDVANKDGLTAMAIAARNGHTDIVERLL 2088
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: A0A3M7REX2_BRAPC (Ankyrin repeat-containing (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7REX2_BRAPC) HSP 1 Score: 54.3 bits (129), Expect = 1.050e-6 Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 10 ELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAAREGHPDAVSFLLANGAS 234
EL AG+DP K DG A+HCAASRG L +++L+ + +++ N TP+ AA G +A + LL G++
Sbjct: 207 ELFAAGSDPNKHEKDGLTALHCAASRGHLECMKILIEQCKTSVDIMDNNNCTPIFYAATLGQVNACNLLLKYGSN 281
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: A0A2U1LQL7_ARTAN (Potassium channel n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LQL7_ARTAN) HSP 1 Score: 52.0 bits (123), Expect = 7.580e-6 Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 7 KELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAAREGHPDAVSFLLANGAS 234
K L+ AGADP K NFDG +H AAS+G +++ + E +N G TPL +A + GH D S L+ GAS
Sbjct: 1227 KNLIRAGADPNKKNFDGRSPLHLAASKGH-EDCRIVFTEGVE-VNISDRYGNTPLLEAIKSGHDDIASLLIKEGAS 1300
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: UPI00201E7578 (uncharacterized protein LOC124119968 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E7578) HSP 1 Score: 50.8 bits (120), Expect = 1.880e-5 Identity = 27/77 (35.06%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 IAKELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAAREGHPDAVSFLLANGA 231
+ + L++ GAD + V+ G+ +H A GD+ ++ +L+ IN G + LTP+ +AA EGH D V L++ GA
Sbjct: 452 VVELLVSEGADVSLVSDRGYNTLHLACLGGDMETVKYVLSLNVVDINSRGGSSLTPVMEAAEEGHRDVVELLVSEGA 528
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: A0A556TQS6_BAGYA (Cyclin-L1 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556TQS6_BAGYA) HSP 1 Score: 50.4 bits (119), Expect = 2.630e-5 Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 1
Query: 7 KELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGMNGLTPLGDAAREGHPDAVSFLLANGAS 234
K L+ G ++ GW AIH AA +G L ++Q LL + +N+ G TPL + G+ D +LL NGAS
Sbjct: 167 KGLVDCGVPVDCIDPRGWTAIHLAAFKGHLALLQFLLHASEMDVNYPDFFGCTPLHRSCMGGNKDTAEYLLQNGAS 242
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Match: A0A812Q781_9DINO (ANK1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q781_9DINO) HSP 1 Score: 48.9 bits (115), Expect = 9.260e-5 Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 1
Query: 67 IHCAASRGDLVVIQMLLAKAPEA-INHFGMNGLTPLGDAAREGHPDAVSFLLANGA 231
+HCAA++GDL ++ +L+ +A + M GLTPL A R+G P AV LLA GA
Sbjct: 494 LHCAAAKGDLDLLALLVRFVRDAELEVVNMQGLTPLALACRKGQPGAVRMLLAAGA 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10169.279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10169.279.1 >prot_Ecto-sp8_S_contig10169.279.1 ID=prot_Ecto-sp8_S_contig10169.279.1|Name=mRNA_Ecto-sp8_S_contig10169.279.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=80bp IAKELLTAGADPAKVNFDGWLAIHCAASRGDLVVIQMLLAKAPEAINHFGback to top mRNA from alignment at Ecto-sp8_S_contig10169:605..844- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10169.279.1 ID=mRNA_Ecto-sp8_S_contig10169.279.1|Name=mRNA_Ecto-sp8_S_contig10169.279.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=240bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10169:605..844- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10169:605..844- >mRNA_Ecto-sp8_S_contig10169.279.1 ID=mRNA_Ecto-sp8_S_contig10169.279.1|Name=mRNA_Ecto-sp8_S_contig10169.279.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=240bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10169:605..844- (Ectocarpus species8 EcLAC_412)back to top |