mRNA_Ecto-sp8_S_contig101537.249.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig101537.249.1
Unique NamemRNA_Ecto-sp8_S_contig101537.249.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: A0A553N8D1_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N8D1_TIGCA)

HSP 1 Score: 169 bits (427), Expect = 2.840e-45
Identity = 92/168 (54.76%), Postives = 119/168 (70.83%), Query Frame = 1 
Query:   25 GQNEANDIGKDMKMMSSMGYGFRTEL-DHSPHELFVE-MDELEGEEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFG-LKRSMSQRSIQGLLDDGKKA 519
            G  E  +  K++  M    YG + ++ DHSPH+LFVE MDEL+GEEW+E +RWIKYEED E    RWGK HV+SL+FHSLINLRL +E    +LD+ ARD+P + +RVVE+ S  G IEE QK  ++RVL YRHK+V  H  TFKFG +K++MSQRS+Q L  D + A
Sbjct:  386 GTPETYEQSKEINQMVEKLYGEKAKVYDHSPHDLFVETMDELQGEEWIEMARWIKYEEDREEGAERWGKAHVSSLSFHSLINLRLALEGCAFILDLEARDIPAVAYRVVEEWSVLGDIEEDQKGDIIRVLTYRHKYVTDHA-TFKFGAMKKNMSQRSLQNLGSDSEAA 552
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: A0A2P8XF65_BLAGE (Anion exchange protein 2 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8XF65_BLAGE)

HSP 1 Score: 149 bits (377), Expect = 9.280e-43
Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 1 
Query:  100 LDHSPHELFVEMDELEGE----EWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQ-RSIQ--GLLDD 507
            +DHSPHE+FV++DEL GE    EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  +DLP + +RVVE +    +IE   K  V+R LL RH+HV+ H + F+FG+KR+ S   S+Q   L+DD
Sbjct:    2 IDHSPHEVFVQLDELHGEGEDREWKETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEEKDLPGVAYRVVEQMVIDELIEPEDKPTVMRALLLRHRHVNEH-DRFRFGMKRTFSSYTSLQFLSLMDD 143
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: UPI00144305C4 (anion exchange protein 2-like n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI00144305C4)

HSP 1 Score: 151 bits (382), Expect = 1.830e-42
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 1 
Query:   88 FRTELDHSPHELFVEMDELEG----EEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKR-SMSQRSIQ 492
            F+   DHSPHE+FV++DEL G     EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  +DLP L HRVVE +  + +I    +A V R LL RHKHVH H   F+FG KR S S  S+Q
Sbjct:   90 FKKMYDHSPHEVFVQLDELHGVGEDREWRETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEGKDLPGLAHRVVEQMVMEELILPEDEAVVKRALLLRHKHVHDHDRGFRFGGKRTSSSYNSLQ 229
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: A0A6P3Y5H9_DINQU (Anion exchange protein n=4 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3Y5H9_DINQU)

HSP 1 Score: 157 bits (396), Expect = 4.170e-41
Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 1 
Query:    1 HKPHMVRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDELEG----EEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQ-RSIQGL 498
            H+P +V++G+ +   I  D          F+   DHSPHE+FV++DEL G     EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  +DLP L +RVVE +  + +I    +  V+R LL RH+HVH H   F+FG KRS S   S+Q +
Sbjct:  315 HRPSVVQIGRRKEGGIPHDT---------FKKMYDHSPHEVFVQLDELHGMGEEREWRETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEEKDLPGLAYRVVEQMVVEELILAEDRPVVMRALLLRHRHVHEHERGFRFGTKRSYSSYTSLQSI 476
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: A0A139WM41_TRICA (Anion exchange protein n=3 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WM41_TRICA)

HSP 1 Score: 156 bits (395), Expect = 5.730e-41
Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = 1 
Query:   13 MVRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDEL----EGEEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNT-FKFGLKRSMSQRSIQGLLDDGKK 516
            MV +G+ E  D+   +K M           DHSPH +FVE+DEL    E  EW E +RWIKYEED+E  V RWGKPHVASL+FHSL+NLR C+E G ++LD+  RDLP + +R+ E+L ++ +I E  KAK++R LL RH+HV+ H    FKF  K S +  S+Q L D  KK
Sbjct:  294 MVHIGRKEGGDLHPSLKKM----------YDHSPHAIFVELDELFSTNEEREWKETARWIKYEEDVEEGVDRWGKPHVASLSFHSLLNLRKCLEDGLVILDMEERDLPAIAYRISEELYKEDLIREDDKAKIMRALLLRHRHVNDHHERGFKFTRKHSYA--SLQNLHDAEKK 454
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: UPI0006265140 (anion exchange protein 3 isoform X3 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006265140)

HSP 1 Score: 156 bits (394), Expect = 7.770e-41
Identity = 85/177 (48.02%), Postives = 113/177 (63.84%), Query Frame = 1 
Query:    1 HKPHMVRVGQNEANDIGKD-MKMMSSMGYGFRTELDHSPHELFVEMDELEG----EEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQ-RSIQGLLDDGK 513
            HK   V++G+ +   I  D +K M           DHSPHE+FV++DEL G     EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  RDLP L +RVVE +  + +I    +  V+R LL RH+HVH H   F+FG+KR+ S   S+Q L  D K
Sbjct:  338 HKASTVQIGRRKEGGIPHDTLKKM----------YDHSPHEVFVQLDELHGVGEEREWRETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEERDLPGLAYRVVEQMVVEELILPEDRPIVMRALLLRHRHVHEHDRGFRFGMKRNYSSYTSLQNLNHDNK 504
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: UPI0010FB5DFB (band 3 anion transport protein isoform X4 n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB5DFB)

HSP 1 Score: 155 bits (393), Expect = 1.060e-40
Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = 1 
Query:    1 HKPHMVRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDELEG----EEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQ-RSIQGLLD 504
            HK   V++G+ +   I  D          F+   DHSPHE+FV++DEL G     EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  RDLP L +RVVE +  + +I    +  V+R LL RH+HVH H   F+FG KRS S   S+Q L D
Sbjct:  317 HKAFTVQIGRRKEGGIPHDT---------FKKMYDHSPHEVFVQLDELHGLGEEREWRETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEERDLPGLAYRVVEQMVIEELILPEDRPVVMRALLLRHRHVHEHERGFRFGGKRSYSSYTSLQNLHD 480
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: UPI001D09864B (anion exchange protein 3 isoform X1 n=2 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D09864B)

HSP 1 Score: 154 bits (390), Expect = 2.670e-40
Identity = 85/169 (50.30%), Postives = 112/169 (66.27%), Query Frame = 1 
Query:   13 MVRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDEL----EGEEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHP-HTNTFKFGLKRSMSQRSIQGLLD 504
            MV VG+N   D+G+       + +    + DHSPH LFVE+DEL    E  EW E++RWIKYEED+E  + RWGKPHVASL+FHSL+NLR C+E G +LLD+  RDLP + +RV EDL  + +I E  KAK++R LL RH+HV+  H   F+F  K S +  S+Q L D
Sbjct:  299 MVYVGKN---DVGE-------LHFSSNKKYDHSPHALFVELDELHTSVEENEWKEKARWIKYEEDVEEGIDRWGKPHVASLSFHSLLNLRKCLEDGLVLLDMEERDLPAIAYRVTEDLYREDLIREEDKAKLMRTLLLRHRHVNESHDKGFRFTKKHSYA--SLQNLYD 455
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: UPI0009957CA2 (band 3 anion transport protein isoform X3 n=1 Tax=Pseudomyrmex gracilis TaxID=219809 RepID=UPI0009957CA2)

HSP 1 Score: 154 bits (390), Expect = 2.670e-40
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 1 
Query:   16 VRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDELEG----EEWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQ-RSIQGLLD 504
            V++G+ +   I  D          F+   DHSPHE+FV++DEL+G     EW E +RWIKYEED+E    RWG+PHVASL+FHSL+NLR C+E+G +LLD+  +DLP L +RVVE +  + +I    K  V+R LL RH+HVH H   F+FG KRS S   S+Q L D
Sbjct:  309 VQIGRRKEGGIPHDT---------FKKMYDHSPHEVFVQLDELQGLGEEREWRETARWIKYEEDVEEGADRWGRPHVASLSFHSLLNLRRCLETGVVLLDLEEKDLPGLAYRVVEQMVIEELILPEDKPIVMRALLLRHRHVHEHDRVFRFGAKRSYSSYTSLQNLHD 467
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BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Match: A0A2A4JL29_HELVI (Band_3_cyto domain-containing protein n=2 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JL29_HELVI)

HSP 1 Score: 147 bits (370), Expect = 3.020e-40
Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 1 
Query:   16 VRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDEL----EGE-EWVERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISARDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGLKRSMSQRSIQGL-LDDG 510
            V VG+ +  D  K   ++S   Y  +   DHSPH +FV++DEL    +GE EW E +RWIKYEED+E    RWGKPHVASL+FHSL+NLR C+E+G +LLD+  +DLP + +RVVE +   G+IEE  K  V+R LL RH+HVH     F    ++  S  S+Q L L++G
Sbjct:   79 VHVGRKDGGD--KVQNILSDAAY--KKMYDHSPHSVFVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGKPHVASLSFHSLLNLRRCLETGVVLLDLDEKDLPGVAYRVVERMVADGLIEEDDKPVVMRSLLLRHRHVHDDRFRFSISGRKHSSYTSLQSLWLEEG 245
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101537.249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A553N8D1_TIGCA2.840e-4554.76Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A2P8XF65_BLAGE9.280e-4353.85Anion exchange protein 2 n=1 Tax=Blattella germani... [more]
UPI00144305C41.830e-4255.71anion exchange protein 2-like n=1 Tax=Megalopta ge... [more]
A0A6P3Y5H9_DINQU4.170e-4147.37Anion exchange protein n=4 Tax=Dinoponera quadrice... [more]
A0A139WM41_TRICA5.730e-4149.13Anion exchange protein n=3 Tax=Tribolium castaneum... [more]
UPI00062651407.770e-4148.02anion exchange protein 3 isoform X3 n=1 Tax=Orussu... [more]
UPI0010FB5DFB1.060e-4048.55band 3 anion transport protein isoform X4 n=1 Tax=... [more]
UPI001D09864B2.670e-4050.30anion exchange protein 3 isoform X1 n=2 Tax=Coccin... [more]
UPI0009957CA22.670e-4048.81band 3 anion transport protein isoform X3 n=1 Tax=... [more]
A0A2A4JL29_HELVI3.020e-4047.95Band_3_cyto domain-containing protein n=2 Tax=Heli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig101537contigEcto-sp8_S_contig101537:13..540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop0
Start1
Seed ortholog score159.1
Seed ortholog evalue1.9e-36
Seed eggNOG ortholog7070.TC003062-PA
Model size528
KEGG koko:K13855
KEGG TC2.A.31.1.2
KEGG Pathwayko04970,ko04971,ko04972,ko04976,map04970,map04971,map04972,map04976
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0008509,GO:0008510,GO:0008514,GO:0009987,GO:0015075,GO:0015077,GO:0015081,GO:0015106,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015701,GO:0015711,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0031224,GO:0031226,GO:0034220,GO:0035725,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098771
Exons1
EggNOG free text desc.Inorganic anion exchanger activity. It is involved in the biological process described with anion transport
EggNOG OGs38BCI@33154,3BA46@33208,3CU8U@33213,3SG8P@50557,41X4S@6656,KOG1172@1,KOG1172@2759
Cds size516
COG Functional cat.P
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143112.9832964-UTR-Ecto-sp8_S_contig101537:12..241681143112.9832964-UTR-Ecto-sp8_S_contig101537:12..24Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig101537 13..24 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143112.995116-CDS-Ecto-sp8_S_contig101537:24..5401681143112.995116-CDS-Ecto-sp8_S_contig101537:24..540Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig101537 25..540 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig101537.249.1prot_Ecto-sp8_S_contig101537.249.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig101537 25..540 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig101537.249.1

>prot_Ecto-sp8_S_contig101537.249.1 ID=prot_Ecto-sp8_S_contig101537.249.1|Name=mRNA_Ecto-sp8_S_contig101537.249.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=172bp
MVRVGQNEANDIGKDMKMMSSMGYGFRTELDHSPHELFVEMDELEGEEWV
ERSRWIKYEEDLEAEVGRWGKPHVASLTFHSLINLRLCMESGTLLLDISA
RDLPELVHRVVEDLSEKGIIEEHQKAKVLRVLLYRHKHVHPHTNTFKFGL
KRSMSQRSIQGLLDDGKKASKS
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mRNA from alignment at Ecto-sp8_S_contig101537:13..540+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig101537.249.1 ID=mRNA_Ecto-sp8_S_contig101537.249.1|Name=mRNA_Ecto-sp8_S_contig101537.249.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=528bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101537:13..540+ (Ectocarpus species8 EcLAC_412)
CATAAGCCACACATGGTCAGGGTGGGCCAAAACGAGGCCAATGACATCGG
GAAGGACATGAAGATGATGAGCAGCATGGGGTATGGGTTCAGGACTGAGC
TTGACCACAGCCCACATGAGCTGTTCGTGGAGATGGACGAGTTGGAGGGA
GAGGAGTGGGTTGAGAGATCCAGGTGGATCAAGTATGAGGAGGACTTGGA
AGCAGAGGTTGGAAGATGGGGAAAGCCTCATGTGGCCTCCTTGACATTTC
ACTCCTTGATAAACCTGAGGTTGTGCATGGAGTCAGGCACCCTCCTGCTG
GATATCTCCGCCAGGGACCTGCCTGAGCTGGTGCACAGGGTGGTGGAGGA
CCTCAGTGAGAAGGGCATCATCGAGGAGCACCAGAAGGCTAAAGTTCTGA
GGGTTCTGCTGTACCGCCACAAGCACGTCCACCCTCATACAAACACTTTC
AAGTTTGGGCTGAAAAGATCCATGTCACAGAGATCCATTCAGGGTCTGCT
GGATGATGGCAAGAAAGCTTCTAAAAGC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig101537:13..540+

>mRNA_Ecto-sp8_S_contig101537.249.1 ID=mRNA_Ecto-sp8_S_contig101537.249.1|Name=mRNA_Ecto-sp8_S_contig101537.249.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101537:13..540+ (Ectocarpus species8 EcLAC_412)
ATGGTCAGGGTGGGCCAAAACGAGGCCAATGACATCGGGAAGGACATGAA
GATGATGAGCAGCATGGGGTATGGGTTCAGGACTGAGCTTGACCACAGCC
CACATGAGCTGTTCGTGGAGATGGACGAGTTGGAGGGAGAGGAGTGGGTT
GAGAGATCCAGGTGGATCAAGTATGAGGAGGACTTGGAAGCAGAGGTTGG
AAGATGGGGAAAGCCTCATGTGGCCTCCTTGACATTTCACTCCTTGATAA
ACCTGAGGTTGTGCATGGAGTCAGGCACCCTCCTGCTGGATATCTCCGCC
AGGGACCTGCCTGAGCTGGTGCACAGGGTGGTGGAGGACCTCAGTGAGAA
GGGCATCATCGAGGAGCACCAGAAGGCTAAAGTTCTGAGGGTTCTGCTGT
ACCGCCACAAGCACGTCCACCCTCATACAAACACTTTCAAGTTTGGGCTG
AAAAGATCCATGTCACAGAGATCCATTCAGGGTCTGCTGGATGATGGCAA
GAAAGCTTCTAAAAGC
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