Ec-28_000510.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000510.1
Unique Name	Ec-28_000510.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	257

Homology

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BLAST of Ec-28_000510.1 vs. uniprot
Match: D7G9D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D5_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.330e-29
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0

Query:  104 MPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLAV 163
            MPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLA 
Sbjct:    1 MPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADPLAA 60

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A1D1YBZ2_9ARAE (Putative nucleoredoxin 1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YBZ2_9ARAE)

HSP 1 Score: 84.3 bits (207), Expect = 6.740e-15
Identity = 55/124 (44.35%), Postives = 67/124 (54.03%), Query Frame = 0

Query:   40 QATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALADP 160
            Q     L GK  VG+ FSA WC   RG   KLA  Y          FEVVFVS+DRD  +F+ Y   MPWLAVP+ ++A   R     KVRG P L V DG+TG++LT    A + + G  A P
Sbjct:   40 QVKVGDLDGK-IVGIYFSAHWCPPCRGFTPKLAEAY---ADLSPKGFEVVFVSSDRDEGSFQGYLSEMPWLAVPFSDSATRQRAKDLFKVRGIPHLVVLDGSTGKVLTTEAVAVLREYGTDAYP 159

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A8J5XBT9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBT9_DIALT)

HSP 1 Score: 82.8 bits (203), Expect = 1.690e-14
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0

Query:   36 TGTLQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLT 144
            +G ++ T+ +L GK  VG+ FSA WC   R    +LA  Y A +   + AFE+VF+S+DRD  +F +Y    PW A+PY      A L+   KV+G P+L + DG TG++LT
Sbjct:   16 SGLMKPTAEALEGKEVVGLYFSAHWCGPCRAFTPQLASTYTAIMGAGK-AFEIVFISSDRDEGSFDSYWSEQPWPALPYAARGEKAALSRKYKVQGIPTLVLLDGKTGKVLT 126

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BLAST of Ec-28_000510.1 vs. uniprot
Match: B4ZFY3_AMPCA (Nucleoredoxin (Fragment) n=1 Tax=Amphidinium carterae TaxID=2961 RepID=B4ZFY3_AMPCA)

HSP 1 Score: 79.0 bits (193), Expect = 8.450e-14
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 0

Query:   32 LLDTTGTLQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFD 136
            LL  + +  +T+ +L GK AV + FSA WC   RG   +LA +Y   L+      EVVFVS+D++ +AF  Y   MPWLA+PY E    A L+   KV+G PSL + D
Sbjct:    5 LLAASASKVSTATALAGKSAVALYFSAHWCPPCRGFTPQLAEWYKNSLKAK--GLEVVFVSSDKEEKAFNEYHAEMPWLALPYTERELKATLSKKFKVQGIPSLVILD 110

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A813KHU8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KHU8_POLGL)

HSP 1 Score: 79.0 bits (193), Expect = 2.260e-13
Identity = 54/125 (43.20%), Postives = 66/125 (52.80%), Query Frame = 0

Query:   37 GTLQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALA 158
            G  +  S+SL     V V FSA WC   +    +L   Y     + + AFEVVFVS+DRD  +F+ Y   MPW AVPY + A    L  A +VRG PSL + DGATG LL A     V  P  LA
Sbjct:   12 GNAEVPSSSLQAG-VVAVYFSAHWCGPCQAYTPQLKKVYERARAKGK-AFEVVFVSSDRDDASFKEYFGSMPWHAVPYADRARQQVLNTAFQVRGIPSLVLLDGATGSLLDANARGKVMQPDFLA 134

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A3B4WWI3_SERLL (Thioredoxin domain-containing protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WWI3_SERLL)

HSP 1 Score: 75.1 bits (183), Expect = 2.970e-13
Identity = 46/99 (46.46%), Postives = 56/99 (56.57%), Query Frame = 0

Query:   42 TSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDG 137
            T+ +L GK  V + FSA WC   RG    LA  Y A L  D  AFEVVFVS+D+D  +F  Y    PWLA+P+G     A L+   KV G PSL + DG
Sbjct:   20 TATALKGKAVVALYFSAHWCPPCRGFTPVLADKYKA-LVGDGKAFEVVFVSSDKDEASFDEYYAEQPWLALPFGSRDVKAALSKKYKVSGIPSLVLLDG 117

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A843U7U9_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U7U9_COLES)

HSP 1 Score: 79.0 bits (193), Expect = 4.690e-13
Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 0

Query:   45 SLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLT 144
            +L GK  V + FSA WC   R     LA  Y     +    FEVVFVS+DR+  +F  Y   MPWLAVP+ +T A ARL    KVRG P L V DG+TG +LT
Sbjct:   73 NLEGK-TVAIYFSAHWCGPCRRFTPNLAEAYSELAPK---GFEVVFVSSDREEDSFGGYFSEMPWLAVPFSDTDARARLKSLFKVRGIPHLVVLDGSTGRVLT 171

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A813DNF3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DNF3_POLGL)

HSP 1 Score: 79.0 bits (193), Expect = 5.370e-13
Identity = 54/125 (43.20%), Postives = 66/125 (52.80%), Query Frame = 0

Query:   37 GTLQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVSDPGALA 158
            G  +  S+SL     V V FSA WC   +    +L   Y     + + AFEVVFVS+DRD  +F+ Y   MPW AVPY + A    L  A +VRG PSL + DGATG LL A     V  P  LA
Sbjct:   12 GNAEVPSSSLQAG-VVAVYFSAHWCGPCQAYTPQLKKVYERARAKGK-AFEVVFVSSDRDDASFKEYFGSMPWHAVPYADRARQQVLNTAFQVRGIPSLVLLDGATGSLLDANARGKVMQPDFLA 134

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BLAST of Ec-28_000510.1 vs. uniprot
Match: A0A7S0QS45_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QS45_9CRYP)

HSP 1 Score: 78.2 bits (191), Expect = 5.480e-13
Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 0

Query:   39 LQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAADVS-DP 154
            ++    SL     VG+ FSA WC   RG   KLA  Y    +    AFE+VF+S+D+D   F +Y   MPWLA+P+ +    A+L+   KV G PSL + D  TG +++  G A +S DP
Sbjct:   33 VELLKGSLPSAGVVGLYFSAHWCPPCRGFTPKLAETYTKIKEAGDKAFEIVFISSDKDQEQFDSYFAEMPWLALPFEQRDLKAKLSKKFKVNGIPSLVLLDAKTGAVISTDGRAALSKDP 152

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BLAST of Ec-28_000510.1 vs. uniprot
Match: UPI00065C13ED (nucleoredoxin n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065C13ED)

HSP 1 Score: 72.4 bits (176), Expect = 2.670e-12
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 0

Query:   27 IYPRALLDTTGTLQATSASLHGKRAVGVLFSARWC---RGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAYREGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLT 144
            ++   ++  +G +Q  ++SL  K  VG+ FSA WC   R     LA  Y +  ++ + AFE+VFVS+DR+    ++Y + MPWL +P+GE      L+    V G P+L + D  TGE +T
Sbjct:    6 LFGNEVVGKSGNVQ--TSSLESKDVVGIYFSAHWCPPCRNFTPVLAANYTSLTEQGK-AFEIVFVSSDREEGEAQSYYDSMPWLMLPFGERDRKNDLSKKYSVSGIPTLVLVDAKTGETIT 123

The following BLAST results are available for this feature:

BLAST of Ec-28_000510.1 vs. uniprot

BLAST of Ec-28_000510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G9D5_ECTSI	1.330e-29	98.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A1D1YBZ2_9ARAE	6.740e-15	44.35	Putative nucleoredoxin 1 (Fragment) n=1 Tax=Anthur...	[more]
A0A8J5XBT9_DIALT	1.690e-14	41.07	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
B4ZFY3_AMPCA	8.450e-14	42.59	Nucleoredoxin (Fragment) n=1 Tax=Amphidinium carte...	[more]
A0A813KHU8_POLGL	2.260e-13	43.20	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]
A0A3B4WWI3_SERLL	2.970e-13	46.46	Thioredoxin domain-containing protein n=1 Tax=Seri...	[more]
A0A843U7U9_COLES	4.690e-13	47.57	Uncharacterized protein n=1 Tax=Colocasia esculent...	[more]
A0A813DNF3_POLGL	5.370e-13	43.20	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]
A0A7S0QS45_9CRYP	5.480e-13	39.17	Hypothetical protein n=1 Tax=Cryptomonas curvata T...	[more]
UPI00065C13ED	2.670e-12	35.54	nucleoredoxin n=1 Tax=Aplysia californica TaxID=65...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10		coord: 29..158 e-value: 1.7E-17 score: 65.5
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 41..162
None	No IPR available	PANTHER	PTHR13871:SF93		coord: 41..162
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 234..256
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 208..233
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..207
None	No IPR available	TMHMM	TMhelix		coord: 210..232
IPR012336	Thioredoxin-like fold	PFAM	PF13905	Thioredoxin_8	coord: 50..136 e-value: 2.5E-11 score: 43.8
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 34..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:517003..520249 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000510.1	Ec-28_000510.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 514464..520560 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000510.1 ID=Ec-28_000510.1|Name=Ec-28_000510.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=257bp
MGVVSPHEVQLLKFGTTMRRKHWTHGIYPRALLDTTGTLQATSASLHGKR
AVGVLFSARWCRGLGSKLALFYHACLQRDQDAFEVVFVSNDRDARAFRAY
REGMPWLAVPYGETAATARLAGACKVRGTPSLAVFDGATGELLTALGAAD
VSDPGALADPLAVIGRWLREDERDDSRSPSAQGEGREGARPRSRSSSSEV
LLSSRVPAAWVLATVFIAAAAAACGIAMAVALYKPPPARTMELRRIPPSR
PTCIKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR036249	Thioredoxin-like_sf