Ec-27_003090.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_003090.2
Unique Name	Ec-27_003090.2
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	152

Homology

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BLAST of Ec-27_003090.2 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 6.070e-32
Identity = 72/140 (51.43%), Postives = 82/140 (58.57%), Query Frame = 0

Query:   20 LTGPIPKDLGYLRALT-------------------------HVALFDNELTAPSKQYLTGGSLKRWQETLTGARRQEPWVISFVDFLVDLWHFLIPIFDDVTDVILLLTKFKDGGSLWWACCGALALADVERVFLVLVTL 134
            L GPIP +LG L AL                                  + APS+  LTG +L RWQE + GA R EP  +S VDFLV LWHFLIPIFDDVTDVILL+  F+D G LWWACCGA  LADVERV ++LVTL
Sbjct:   91 LRGPIPLELGNLSALQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDAPSR-LLTGAALARWQEKVRGAGRVEPLAVSVVDFLVALWHFLIPIFDDVTDVILLIGTFEDRGGLWWACCGAFVLADVERVLILLVTL 229

The following BLAST results are available for this feature:

BLAST of Ec-27_003090.2 vs. uniprot

BLAST of Ec-27_003090.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JFA4_9PHAE	6.070e-32	51.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 141..151
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 111..140
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..72
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 73..91
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 92..110
None	No IPR available	TMHMM	TMhelix		coord: 127..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:2723944..2725086 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_003090.2	Ec-27_003090.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 2713192..2726593 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_003090.2 ID=Ec-27_003090.2|Name=Ec-27_003090.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=152bp
MTGWDICPVHDHLRFWFALLTGPIPKDLGYLRALTHVALFDNELTAPSKQ
YLTGGSLKRWQETLTGARRQEPWVISFVDFLVDLWHFLIPIFDDVTDVIL
LLTKFKDGGSLWWACCGALALADVERVFLVLVTLFACFVLDSLYSARHRR
I*