Ec-00_003350.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003350.1
Unique NameEc-00_003350.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length188
Homology
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A6H5JR22_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR22_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.050e-86
Identity = 146/184 (79.35%), Postives = 146/184 (79.35%), Query Frame = 1 
Query:  100 AAGRICGAASVAANRHCRLRRIVISAATAMPPRTAAGSRFVRQASSATTLPDDD-VLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKT 648
            AAGR CGAASVA NRHCRLRR VISAA                            VLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYA GDAPVEG TVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEE ENVRALSG TSP VDCY GAGEG RIATYQGYLNHKT
Sbjct:    3 AAGRFCGAASVAVNRHCRLRRKVISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYALGDAPVEGGTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEVENVRALSGVTSPGVDCYGGAGEGLRIATYQGYLNHKT 186
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BLAST of Ec-00_003350.1 vs. uniprot
Match: D7FRP6_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP6_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.080e-80
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1 
Query:  277 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE 651
            MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE
Sbjct:    1 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE 125
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A836CE97_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE97_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.230e-24
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 1 
Query:  220 VRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPG-DAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSP---SVDCYSGAGEGFRIATYQGYLN 639
            +R +S+A  +P D  L+LPMP+LSPSM   T+ KWL + GDE  EY+A L + TD+L A G   P    +  MVVEL E GF+ KL   EG+TV VG+ +  +CEEE++V AL   T      V  Y   G G ++   Q +L+
Sbjct:   21 LRASSTAKGMPHD-TLWLPMPRLSPSMKTGTIKKWLLSPGDEFGEYEAALTIDTDTLVAEGLKTPESSGSTSMVVELLEAGFMAKLLRKEGETVRVGEPIALLCEEEDSVSALQSDTLDIPHDVQLYE-EGNGHKVPQLQAFLD 162
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A8J9WR07_9CHLO (Probable dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR07_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 7.770e-14
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1 
Query:  259 DVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL----YAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYL 636
            +V+ +PMPKLSPSMT  T+++WLKA GDEI EYD I+E+ T  L    Y  G       +V ++VE  E G +    V +G  V+VG  V  M E+ +++  L G   P      G+ +  R   +Q YL
Sbjct:    7 NVIVVPMPKLSPSMTEGTISRWLKAPGDEIVEYDIIMEVDTQELTEAAYKVGKF---AGSVTLLVEAQEDGIMHSHLVPQGKQVKVGTPVALMAEQGQSLPDLDGYKPPENVYAEGSQD--RTLIWQSYL 131
[Close]
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0YW53_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YW53_9CRYP)

HSP 1 Score: 71.2 bits (173), Expect = 1.750e-11
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 1 
Query:  271 LPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSG---ATSPSVDCYSGAGE-GFRIATYQGYL 636
            +PMPKL+P M  A ++KWL  EGDE++  D + EL  + L        E     M++E  E GFV +L  AEG  V   + ++ +C++E +    +G      PS +  SG+G+ G R+  +Q Y+
Sbjct:    1 MPMPKLTPQMESAVLSKWLIKEGDEVSAGDLVCELEVEGLNP------ELPHATMLIETHEAGFVARLLEAEGSRVAADRGILVLCDDEASKDQFAGYERKDGPSPN--SGSGDSGARVFCWQAYV 118
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0IYL7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IYL7_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 3.400e-11
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 1 
Query:  193 PRTAAGSRFVRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENV 546
            PRT   S+ +R   S     +     +PMP+LSPSM+R  + +W  + GD+I+ YD + ++STD L     +P    T  + VE  E G++ K+ VAEG        +  +CE EE+V
Sbjct:   11 PRTMPFSQQIRHFPSGCAHANVSYKLMPMPRLSPSMSRGVLERWHLSAGDQISTYDLVCDVSTDELLDEPSSP----TFVLEVESHEDGWLAKVLVAEGGAAAPDMPIAVICENEEDV 124
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7S0L0Q4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L0Q4_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 8.660e-10
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 1 
Query:  211 SRFVRQASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDT 495
            SR    AS A+ LP   ++  PMP+LSPSMTR  + KWL A GD ++ YD + ++STD L    D P  G+ V + +E  E G++ K  +AEGD+
Sbjct:   19 SRCSSSASRASFLPPHKLM--PMPRLSPSMTRGVLDKWLVAAGDAVSTYDLLCDVSTDELL---DEPKSGTHV-LEMESHEDGWLAKGLLAEGDS 107
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BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A2E3SNU1_9BACT (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2E3SNU1_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 5.430e-9
Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 1 
Query:  277 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPS 576
            MPKL  S+  AT+TKWLK+EGD+I E DAI+E++TD + +   +PVEG  V             K   +EGD VEVG+ V+A  E E    A     SP+
Sbjct:    8 MPKLGESIIEATITKWLKSEGDQIEEDDAIVEIATDKVDSEIPSPVEGKLV-------------KALFSEGDVVEVGK-VIAYIEVEGMETAEESQESPT 93
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BLAST of Ec-00_003350.1 vs. uniprot
Match: UPI001557D946 (2-oxo acid dehydrogenase subunit E2 n=2 Tax=unclassified Lentimicrobium TaxID=2677434 RepID=UPI001557D946)

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 1 
Query:  277 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQ--AVMAMCEEEEN 543
            MPKL  S+  AT+TKWLK EGD ++E DAILE++TD + +   +PVEG  +  + E             EGD + VG+  A++AM  +EE+
Sbjct:    8 MPKLGESIIEATITKWLKVEGDSVDEDDAILEIATDKVDSEIPSPVEGKIIKTLYE-------------EGDVIAVGEVIAIIAMDGDEED 85
[Close]
BLAST of Ec-00_003350.1 vs. uniprot
Match: A0A7C0VZ72_9BACT (Dihydrolipoyllysine-residue acetyltransferase (Fragment) n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A7C0VZ72_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.160e-8
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 1 
Query:  268 YLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRAL 555
            Y+ MPKL  +M + TV +WLK EGD I E + +LE+ TD    P +AP  G              + K+ V EG+T+ V   +  + EE+E+++ L
Sbjct:    4 YIIMPKLGFNMDQGTVVRWLKKEGDAIEEREEVLEIETDKTVMPVEAPCSG-------------ILRKILVEEGETIAVTLPIGIIAEEKEDIQPL 86
The following BLAST results are available for this feature:
BLAST of Ec-00_003350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR22_9PHAE1.050e-8679.35Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D7FRP6_ECTSI1.080e-80100.00Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A836CE97_9STRA1.230e-2443.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J9WR07_9CHLO7.770e-1438.46Probable dihydrolipoyllysine-residue acetyltransfe... [more]
A0A7S0YW53_9CRYP1.750e-1134.13Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0IYL7_9EUKA3.400e-1134.75Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0L0Q4_9EUKA8.660e-1043.16Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A2E3SNU1_9BACT5.430e-943.00Dihydrolipoamide acetyltransferase component of py... [more]
UPI001557D9461.000e-841.762-oxo acid dehydrogenase subunit E2 n=2 Tax=unclas... [more]
A0A7C0VZ72_9BACT1.160e-835.42Dihydrolipoyllysine-residue acetyltransferase (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3335595..3338093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score72.4
Seed ortholog evalue2.5e-10
Seed eggNOG ortholog3067.XP_002945888.1
Length1163
Hectar predicted targeting categorymitochondrion
Gene idEc-00_003350.1
EggNOG free text desc.temperature-gated cation channel activity
EggNOG OGs382X7@33090,COG0508@1,COG0666@1,KOG0510@2759,KOG0557@2759
COG Functional cat.C
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003350Ec-00_003350Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3335595..3338093 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003350.1Ec-00_003350.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3336103..3338002 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003350.1.3Ec-00_003350.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3335595..3336255 -
Ec-00_003350.1.2Ec-00_003350.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3336694..3336894 -
Ec-00_003350.1.1Ec-00_003350.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3337793..3338093 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0033503UTR:Ec-00_003350.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3335595..3336102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003350.1CDS:Ec-00_003350.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3336103..3336255 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0033505UTR:Ec-00_003350.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3338003..3338093 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=188bp
MNAAAGRICGAASVAANRHCRLRRIVISAATAMPPRTAAGSRFVRQASSA
TTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL
YAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEE
NVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE*
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spliced messenger RNA

>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1163bp|location=Sequence derived from alignment at chr_00:3335595..3338093- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATCCCATCGCCCAACCGTGCTGCACACACCACCACACGCTGCCGCGCTCT
CTCGCTCTCTTCCTCTTGACCTCCTTTCACATAGTTATGCGATGAATGCT
GCTGCAGGGAGAATATGTGGCGCTGCCAGTGTAGCTGCCAATCGTCATTG
TCGGCTGCGGCGAATAGTGATCTCTGCAGCAACGGCAATGCCTCCGCGGA
CTGCTGCGGGTTCTCGGTTTGTAAGACAAGCCTCCAGTGCCACCACGCTT
CCTGATGACGACGTCCTGTACCTTCCGATGCCCAAGCTTTCCCCCAGCAT
GACGCGAGCCACCGTGACCAAGTGGCTCAAGGCGGAAGGGGACGAGATCA
ACGAGTACGACGCCATCTTGGAGCTCAGCACGGACTCGCTCTACGCCCCA
GGGGACGCGCCGGTGGAGGGGAGCACGGTCGACATGGTCGTCGAGCTCGC
AGAGTGCGGCTTCGTGGGGAAGCTTTTCGTTGCGGAGGGGGACACCGTAG
AGGTGGGGCAAGCGGTGATGGCGATGTGCGAAGAAGAGGAGAACGTACGG
GCGCTGAGCGGGGCCACAAGCCCCTCGGTTGATTGCTACAGCGGGGCCGG
CGAGGGCTTTAGAATAGCAACGTACCAGGGCTACCTCAATCACAAGACGG
AGTAGGATGTGCATGTGTGCATTAATAGCAAACAGAGCCATGCTATGTAG
CTGTGCAGAGGACGATTTCTCGGCCCGATAGAGCCAATCAGGTTACCGTT
GGTAAGGTCAGCAGGTCAGCGGAGTATATTCCTTGTGGGATCTAGTCTAC
CAAAAGGAGAAAAGGGCATAGCAGTGTTGCAACGGTAATGACTCTTGTGC
GGACTGATGCGCTGATTTGGCCAACTGAACATGTACGAGTTGACACCACG
AGAGTTCTCATGGCTTTTGAGCGTGCATGTGCATTTTGTTTTATCCTTGC
CAGTTGTTCTACTCGGCCTCAGGCTTTCGATTTGTGGAAGTTGCCGAAAT
CACACACGACACGTGCCGAACCGTAGTTCACACGCGAATGACGCGGACAC
ACGCACACATCTTTCGGCGTGCGGTGCGTATTTTGGAGCTCGGGTGGAGG
CGCATTCCAAGCTCTTGATAAAACCATACCAAACATGACACGCAGCAACA
CGTCAATGCCGAG
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protein sequence of Ec-00_003350.1

>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=188bp
MNAAAGRICGAASVAANRHCRLRRIVISAATAMPPRTAAGSRFVRQASSA
TTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL
YAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEE
NVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKTE*
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mRNA from alignment at chr_00:3335595..3338093-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2499bp|location=Sequence derived from alignment at chr_00:3335595..3338093- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATCCCATCGCCCAACCGTGCTGCACACACCACCACACGCTGCCGCGCTCT
CTCGCTCTCTTCCTCTTGACCTCCTTTCACATAGTTATGCGATGAATGCT
GCTGCAGGGAGAATATGTGGCGCTGCCAGTGTAGCTGCCAATCGTCATTG
TCGGCTGCGGCGAATAGTGATCTCTGCAGCAACGGCAATGCCTCCGCGGA
CTGCTGCGGGTTCTCGGTTTGTAAGACAAGCCTCCAGTGCCACCACGCTT
CCTGATGACGACGTCCTGTACCTTCCGATGCCCAAGCTTTCCCCCAGCAT
GGTGAGAGCGAATTTGCTGTTCCGTTGTGTCCATCGCAAATCGGTTGTAC
TTCATTGGTCTGTAACTGCAACTTGCTGCAGTTGAATGTACCGTTTTACA
CCGTTTTCGAAGTGCCGTTCCAGGTATAGACTGTAGTCTGCATGGCATGT
AGACGCAGTAGTAGAGAAGCATAATCCACACAAGGAAGGCGAGACCCATC
TTTCTCTTTCCGCCGATTCTAGTGGACCCTCATCAGTGGGATTTCATGAA
ACCCCGTCTGGGGGCGAGAATCCGTCGTCTTTGATGTTGTGCGCTAGGGA
GCGACCCCGTCGATGTTCTGATCGCCTGCGTAACGTCTCCGGTGTGTCAG
CATTGCGTGTGCTTTGTTATGTAGGCCGCACTGCGTACTCGACTCATACC
TACGCATCGTGAACACGTTCCCGTCTCGAAAACTACACTACTCTACACAA
ATGGAGTGATGCGTTTTCGGGCTTCCTTTCTAAACACGAGATGGCGTCCC
CGTTGCATTGCTGTCGATCCTATCGGGTGAAGCACACAGCATTGCATTCC
CGTCACGTTCGCTCCAGGTGAGCCTGAGTGCATGGGTGTGTAGGGGGAAA
ACATATGCGGCACACAACTGTAATATGGACTCACGGTTCCCCACACCACA
GCTCGGCTCTCTCGTCCTACAGCTCTTCTTGCCACTGCTTACTTCCTACA
ACATCATGGGCGGATTCCGACCTAAAGCGCACATCCGCCGAACTCTCTCT
CTTGTCTCTGTTCGCTTTCTCCTACTACGGTGCCATGAAAGCACGAGAAC
CGATGTAGGAATGTGGCATACGCCGTAAGTAGTTCATTTGTTTTCCCGCC
TCCTGCAACGCCTGGGCCTTCTTCCTGCGAAAACCAATACGAAACGCAGA
CGCGAGCCACCGTGACCAAGTGGCTCAAGGCGGAAGGGGACGAGATCAAC
GAGTACGACGCCATCTTGGAGCTCAGCACGGACTCGCTCTACGCCCCAGG
GGACGCGCCGGTGGAGGGGAGCACGGTCGACATGGTCGTCGAGCTCGCAG
AGTGCGGCTTCGTGGGGAAGCTTTTCGTTGCGGAGGGGGACACCGTAGAG
GTACGCGTTGTAGTTATGAGGCGCGAGCCGGGCACTTGAGGCACGGTTGC
TATGCAGCAAGTCGGCGATGCGCAGATCCATCCCTAATGTGCTGGTTTAA
TAAACCTCGGCATTGGCGTAGTAGGGAGGTCGAGGCTTGTCTTGCAACTA
AATAGTGTTTACTCCTACTATTGCCGACACTTAGCTTGACATAATTGGCT
TCATAGTAGCTTGATGAGTGCGTCTTTGCCACTGGGCACCGCGATTGTCA
CTGCTCCTGGCATTGGTCGTCGAATCCTGACTCCACGTCGGCAAGGGTGG
TTAACGTGTCGGTCGGTACTTTGACAACACAGGTGCTTTCCCCTGCCTCT
ATCCGTGGATCCTTGTCAAACACACGCCGACGTGTTTCCCCATGCGCCCG
CCTGCTCCCGAACGCTACAATACACGGAACCATGGCAGGTGGGGCAAGCG
GTGATGGCGATGTGCGAAGAAGAGGAGAACGTACGGGCGCTGAGCGGGGC
CACAAGCCCCTCGGTTGATTGCTACAGCGGGGCCGGCGAGGGCTTTAGAA
TAGCAACGTACCAGGGCTACCTCAATCACAAGACGGAGTAGGATGTGCAT
GTGTGCATTAATAGCAAACAGAGCCATGCTATGTAGCTGTGCAGAGGACG
ATTTCTCGGCCCGATAGAGCCAATCAGGTTACCGTTGGTAAGGTCAGCAG
GTCAGCGGAGTATATTCCTTGTGGGATCTAGTCTACCAAAAGGAGAAAAG
GGCATAGCAGTGTTGCAACGGTAATGACTCTTGTGCGGACTGATGCGCTG
ATTTGGCCAACTGAACATGTACGAGTTGACACCACGAGAGTTCTCATGGC
TTTTGAGCGTGCATGTGCATTTTGTTTTATCCTTGCCAGTTGTTCTACTC
GGCCTCAGGCTTTCGATTTGTGGAAGTTGCCGAAATCACACACGACACGT
GCCGAACCGTAGTTCACACGCGAATGACGCGGACACACGCACACATCTTT
CGGCGTGCGGTGCGTATTTTGGAGCTCGGGTGGAGGCGCATTCCAAGCTC
TTGATAAAACCATACCAAACATGACACGCAGCAACACGTCAATGCCGAG
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Coding sequence (CDS) from alignment at chr_00:3335595..3338093-

>Ec-00_003350.1 ID=Ec-00_003350.1|Name=Ec-00_003350.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=564bp|location=Sequence derived from alignment at chr_00:3335595..3338093- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAATGCTGCTGCAGGGAGAATATGTGGCGCTGCCAGTGTAGCTGCCAA
TCGTCATTGTCGGCTGCGGCGAATAGTGATCTCTGCAGCAACGGCAATGC
CTCCGCGGACTGCTGCGGGTTCTCGGTTTGTAAGACAAGCCTCCAGTGCC
ACCACGCTTCCTGATGACGACGTCCTGTACCTTCCGATGCCCAAGCTTTC
CCCCAGCATGACGCGAGCCACCGTGACCAAGTGGCTCAAGGCGGAAGGGG
ACGAGATCAACGAGTACGACGCCATCTTGGAGCTCAGCACGGACTCGCTC
TACGCCCCAGGGGACGCGCCGGTGGAGGGGAGCACGGTCGACATGGTCGT
CGAGCTCGCAGAGTGCGGCTTCGTGGGGAAGCTTTTCGTTGCGGAGGGGG
ACACCGTAGAGGTGGGGCAAGCGGTGATGGCGATGTGCGAAGAAGAGGAG
AACGTACGGGCGCTGAGCGGGGCCACAAGCCCCTCGGTTGATTGCTACAG
CGGGGCCGGCGAGGGCTTTAGAATAGCAACGTACCAGGGCTACCTCAATC
ACAAGACGGAGTAG
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Synonyms
The feature 'Ec-00_003350.1' has the following synonyms
Synonym
Esi0217_0012
Esi_0217_0012
PDH