Ec-00_003210.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_003210.1
Unique NameEc-00_003210.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length176
Homology
BLAST of Ec-00_003210.1 vs. uniprot
Match: D7FPA2_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPA2_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 8.850e-95
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query:    1 MHIVAGEDMIYDMLLLLSVLLQLVGPPRACPWYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLR 134
            MHIVAGEDMIYDMLLLLSVLLQLVGPPRACPWYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLR
Sbjct:    1 MHIVAGEDMIYDMLLLLSVLLQLVGPPRACPWYDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLR 134          
BLAST of Ec-00_003210.1 vs. uniprot
Match: D8LQC0_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC0_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 2.170e-88
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA 176
            YDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA
Sbjct:   84 YDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA 227          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A6H5JC65_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC65_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.670e-72
Identity = 127/182 (69.78%), Postives = 128/182 (70.33%), Query Frame = 0
Query:   49 MLPTSIPDASGNEKSGLDMYFLEQDGGTFKATV------------------------------------------------------FYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA 176
            MLPTSIPDASGNEKSGLDMYFLEQDGGTFKATV                                                      FYKPYFYVLVKEER+IQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA
Sbjct:    1 MLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVRTCRDRRAITCTHVCTKLSRPTAPNLFRSSRPNENLSHFMFALWRRSFLFSTKVFYKPYFYVLVKEERHIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYMHAEA 182          
BLAST of Ec-00_003210.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.810e-44
Identity = 69/132 (52.27%), Postives = 102/132 (77.27%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTR 164
            Y R+ EG PRLGW+ +M  +++PD  G E+SG+D+YFL+QDG TFK T FY+PYFY+ ++++RYI + +Q ++R+F+   + +   DKEDLD+PNHLSGKL RFL+LSF +V++LMEV+  L+P ++ NK R
Sbjct:   69 YSRFEEGSPRLGWLLDMNASTVPDEEGRERSGMDLYFLQQDGDTFKVTTFYEPYFYIGLRDDRYIAEVVQLLQRKFDQVGMTILACDKEDLDLPNHLSGKLHRFLRLSFFNVSELMEVRSVLLPLVERNKQR 200          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A812Q0Y1_9DINO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0Y1_9DINO)

HSP 1 Score: 138 bits (347), Expect = 1.590e-34
Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTR 164
            Y+ ++EGPPR+G++ NMLPTS+ +    E+S LD+YFL+QDG TFKA + Y+PYFYV V   R+ ++    + R+FE     V+  + EDLD+PNHLSG  R  LKL F SV +LMEV+  L P +QANK R
Sbjct:   58 YETFTEGPPRVGYLTNMLPTSVANEDRIERSALDLYFLQQDGATFKAQLVYQPYFYV-VCAARWCKEVTALLERKFESLIAGVSTAEMEDLDLPNHLSGIKRTLLKLEFRSVQELMEVRNELQPIVQANKRR 188          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A2R5GVQ4_9STRA (DNA-directed DNA polymerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVQ4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.380e-32
Identity = 66/144 (45.83%), Postives = 97/144 (67.36%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASGN-----EKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAY 171
            +D ++EGP R+GW+ NMLP ++           E S L++YFL+QDG TFKA + ++PYFYVLVKEE ++++    + RRF     EV +VD+EDLDM +HL+GK R  L+L F +V DLM V+  +   ++ NK+R++A DAY
Sbjct:   55 FDDFTEGPARVGWLLNMLPCTVNFVDPTLEKPVELSALELYFLQQDGNTFKAKILHRPYFYVLVKEE-FLKETKAMLERRFASDVSEVAMVDREDLDMADHLAGKHRVLLQLFFRNVNDLMNVRLEVQEAVRVNKSRSKAADAY 197          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A7S0IKI0_MICPS (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IKI0_MICPS)

HSP 1 Score: 124 bits (312), Expect = 5.420e-31
Identity = 62/140 (44.29%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDA-SGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAY 171
            +  ++EG  RLGW+ N+  T++ +A +G E S ++ YF++QDG TFKA V Y PYF +  K +    D    +RRR+E    +VTV+DKEDLD+ NHLSG  +++LK++F +V DLM+V+R ++P ++ N++R+EA +AY
Sbjct:   18 FVNFTEGDERLGWLVNVSSTTVQEAETGKEFSAVNCYFMQQDGDTFKAQVRYAPYFLIATKPDCE-HDVEAFLRRRYEGKIHDVTVLDKEDLDLKNHLSGLKQKYLKVTFATVQDLMDVRREVLPMVKKNQSRSEAAEAY 156          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A2G5BKN9_COERN (DNA polymerase epsilon catalytic subunit n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKN9_COERN)

HSP 1 Score: 127 bits (319), Expect = 9.680e-31
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASGNE-KSGLDMYFLEQDGGTFKATVFYKPYFYVLVK--EERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAY 171
            + RY EGP RLGW+ NM  TS+PD   N  KS +D YFLEQDGG+FK T+ +KPYFY++     E  +++ +    RRF+     V  V++EDL M NHL+G  RR +K+ F +V DL+ V+R L P IQ N  R+E  +AY
Sbjct:   35 FGRYQEGPQRLGWLVNMHATSVPDEERNSTKSAVDYYFLEQDGGSFKCTLLFKPYFYIICTPGSEAEVEEWLV---RRFDRLVDHVESVEREDLQMTNHLTGCKRRLVKIVFRNVQDLLSVRRELQPIIQRNSKRSELVNAY 173          
BLAST of Ec-00_003210.1 vs. uniprot
Match: UPI001D63342B (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001D63342B)

HSP 1 Score: 125 bits (315), Expect = 3.330e-30
Identity = 63/142 (44.37%), Postives = 100/142 (70.42%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDA---SGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAY 171
            +DR++ GP R+GW+ NM PT++P     +G+  SG+D YFL+++GG+FKA+V Y PYF ++V+E+R I+   + +R+  E +   ++ V+KEDL + NHL G  R+ L+LSFH+V+DL+E +R L P IQ NK+   ++D Y
Sbjct:   55 FDRFTSGPKRVGWLVNMHPTTLPTTEVLAGS--SGVDYYFLDEEGGSFKASVQYDPYFLLMVQEDRAIE-VEEYLRKFLESTLKRISWVEKEDLGLTNHLIGLKRQLLQLSFHNVSDLLEARRQLQPIIQQNKSTKTSKDIY 193          
BLAST of Ec-00_003210.1 vs. uniprot
Match: A0A0L9V693_PHAAN (DNA polymerase epsilon catalytic subunit n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9V693_PHAAN)

HSP 1 Score: 124 bits (312), Expect = 7.980e-30
Identity = 59/141 (41.84%), Postives = 96/141 (68.09%), Query Frame = 0
Query:   33 YDRYSEGPPRLGWIFNMLPTSIPDASG-NEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDCIQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEVKRALMPTIQANKTRAEAQDAYM 172
            +D +SEG  RLGW+  +  +S+ D +   E S +D+YF+ QDG +FK+   ++PYFYV  K++  + D    +RRR+E    ++ ++DKEDLD+ NHLSG  + +LKLSF +V  LM+VKR LMP+++ NK +++  +A++
Sbjct:   35 FDLFSEGEKRLGWLLTLASSSVQDENSYKEYSCVDLYFVTQDGSSFKSKFRFRPYFYVATKDKMEM-DVEAYLRRRYEGQIADIEIIDKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPSVERNKAKSDTAEAFV 174          
The following BLAST results are available for this feature:
BLAST of Ec-00_003210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA2_ECTSI8.850e-95100.00DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
D8LQC0_ECTSI2.170e-88100.00DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5JC65_9PHAE1.670e-7269.78DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
W7TVX1_9STRA4.810e-4452.27DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A812Q0Y1_9DINO1.590e-3450.76DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A2R5GVQ4_9STRA2.380e-3245.83DNA-directed DNA polymerase n=1 Tax=Hondaea fermen... [more]
A0A7S0IKI0_MICPS5.420e-3144.29DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A2G5BKN9_COERN9.680e-3147.18DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
UPI001D63342B3.330e-3044.37uncharacterized protein n=1 Tax=Ogataea philodendr... [more]
A0A0L9V693_PHAAN7.980e-3041.84DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 71..161
e-value: 1.1E-9
score: 38.0
NoneNo IPR availableGENE3D3.30.342.10coord: 55..172
e-value: 7.9E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 33..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.71
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 33..174
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 63..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3237486..3239379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003210.1Ec-00_003210.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 3237486..3239380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_003210.1 ID=Ec-00_003210.1|Name=Ec-00_003210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=176bp
MHIVAGEDMIYDMLLLLSVLLQLVGPPRACPWYDRYSEGPPRLGWIFNML
PTSIPDASGNEKSGLDMYFLEQDGGTFKATVFYKPYFYVLVKEERYIQDC
IQCIRRRFEDSAVEVTVVDKEDLDMPNHLSGKLRRFLKLSFHSVADLMEV
KRALMPTIQANKTRAEAQDAYMHAEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR029703POL2
IPR012337RNaseH-like_sf