Ec-00_001170.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001170.1
Unique NameEc-00_001170.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length211
Homology
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BLAST of Ec-00_001170.1 vs. uniprot
Match: D8LE73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE73_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 6.810e-47
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 
Query:  132 MEELSGVIEKADSVLLVGHGNAKSNIAEVLASALCERQPGLTDKIEDVLRVDGKHITQNQLLKLGRRHLTHTEDPRRPT 210
            MEELSGVIEKADSVLLVGHGNAKSNIAEVLASALCERQPGLTDKIEDVLRVDGKHITQNQLLKLGRRHLTHTEDPRRPT
Sbjct:    1 MEELSGVIEKADSVLLVGHGNAKSNIAEVLASALCERQPGLTDKIEDVLRVDGKHITQNQLLKLGRRHLTHTEDPRRPT 79
The following BLAST results are available for this feature:
BLAST of Ec-00_001170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE73_ECTSI6.810e-47100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..210
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.817
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1460279..1464519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001170.1Ec-00_001170.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1459889..1464588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001170.1 ID=Ec-00_001170.1|Name=Ec-00_001170.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=211bp
MMLTQAVVLVLGCSISHAFVLPLVGSRNAASIGGNLAPQRAPVPLRQQQE
AAVNAAETAPEGSLVLIEVTKKHAKVFKSVAKGSVPEVVEPIDEWRVHET
SNREKRSQGQGKHHAEKTDPVAEEAYLVKFYMEELSGVIEKADSVLLVGH
GNAKSNIAEVLASALCERQPGLTDKIEDVLRVDGKHITQNQLLKLGRRHL
THTEDPRRPT*
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